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The map label for this gene is ygaU [C]

Identifier: 13476481

GI number: 13476481

Start: 6462722

End: 6464197

Strand: Direct

Name: ygaU [C]

Synonym: mlr7813

Alternate gene names: 13476481

Gene position: 6462722-6464197 (Clockwise)

Preceding gene: 13476479

Following gene: 13476483

Centisome position: 91.85

GC content: 69.65

Gene sequence:

>1476_bases
ATGGCAATTAATCCACTGAAGGCGTTCCTGTTCGCGGCGGGTGGGACCGTCGCGGCCGCGGGAACTGCCTATGTATCGGG
CGCACTCGACCCGTATCTTCATCCAACGCCGCCGGCGAAGGTCGCGGCCTTGACGCCGCCCGAGGCGCCGAAACCGGCTG
ATCCCGGCACGGAAGGGCGACTGCCAGCGCCGGCGGTGCCGGCCGCCCCCGCCGCGGCGCCGCAGGCGACTGCTCCAGCC
GCGTCCGCGACAGAGGCTACAGCTCCGGCAGCGCCTGCACCGGCCGCACCCGCAGCTGCCGGCCCGACCGCGCCGACTTT
CGATGTCGTGCGCGTCGAGAGCAATGGCTCGATCGTCATTGCCGGCAATGCAGCGCCCAATTCAAAGGTCGAGATCCTGA
GCGGCACGGCGGTGCTCGGTTCGACGGTGGCGGGTGCCGATGGCGCCTTTGTCATCGTGCTCGACGATCCGCTGAAGCCT
GGCGACTATACGATTACCCTGCATTCGACCGTCGGCACGGTCGTGACCGTCTCGGTGCAGACCGCTGTCGTTTCGGTTCC
CAAGAACGCCGCCGGCCAGGTGCTGGCCATGGTCGAGGAGCCCGGTAAGCCGGCCGAACTGCTGACGGTTCCCGCGCCCG
AGACCAAACTGGCAGCACCCGCCACCGGCGACCAGGCTGCCGCTCCGGCTGCACCGGGGCCAGCTCCGGCCGCTGAAGCG
CCCGCAACGGCTGCTCCGGCCCCCGCCGCACCGGCAACGCCGCCCGCCGCCGTGGCCGAACCCAAGATCGTCGTCGAGGC
GGTCGAGATCGACGGCAACAAGATCTTTGTCGCCGGTCTCGCCGATCCGGGCCGCAAGGTGCGCGCCTATGCCAACGACA
TCCTGCTCGGTGACGCGCTGACATCGCCGGACGGTCATTTCCTCATCGAAGCGACGCGCGACATTCCAGTCGGCAGCTAC
ACCATCCATGTCGACGGCCTCGATGCCGACGGCGTGAAGGTCGTGGCCCGCGCCGCCGTGCCGTTCGAGCGCGAGCCGGG
CGAAGCGGTTGCCGCGGTGGCGCCTGCCGGGACCAAGCCGGCGGATGCCAAGCCGGCCGCACCGGCAGCCGCCGAAGCAC
CCGCCGCTCCGGCTCCTGCCGCACCGGCTGCGCCCGCTGCGGAGGCTCCGGCCGTTGTCGTTGCCCCCACGCCGCCAAGC
GACGTGCCGGAAGCCGTGGCGCCCAAGCTCGAACATGCCGACGGCGCCGTGATTATCCGCCGCAACGACACGCTGTGGCG
GATTTCGCGGCGCGTCTACGGCCACGGCGTGCGATATTCCACCATCTACCTCGCCAACCAGGACCAGATCAGGGATCCCG
ACCACATCTGGCCCGGCCAAGTGTTCAAGGTCCCGGAAAAGTCCAAGGAAGGCGAAGCCGCCGACCTCAAGGCAATGGGC
GAGCAGGCCACGACGGCGCCGACTAAGAAGCAGTAG

Upstream 100 bases:

>100_bases
AAGGGTTGACAAGCCGGGCTTTTTCTTGAGTGCCCGTTTTTCTTGTCGGCATTGGCAAAACACGCTAGACCGGCATTAGG
TGGCTAAGGGGTAGGGAAAT

Downstream 100 bases:

>100_bases
GAGCCTACATCGATCAGCTGGCATCGCCTGCTTGGTTGGAGTGAAGCGCGAAACCGTTTGCCCCGGGATCGCCCAGCTCA
GGGCGGAGATTCATGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: LysM Domain-Containing Protein

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MAINPLKAFLFAAGGTVAAAGTAYVSGALDPYLHPTPPAKVAALTPPEAPKPADPGTEGRLPAPAVPAAPAAAPQATAPA
ASATEATAPAAPAPAAPAAAGPTAPTFDVVRVESNGSIVIAGNAAPNSKVEILSGTAVLGSTVAGADGAFVIVLDDPLKP
GDYTITLHSTVGTVVTVSVQTAVVSVPKNAAGQVLAMVEEPGKPAELLTVPAPETKLAAPATGDQAAAPAAPGPAPAAEA
PATAAPAPAAPATPPAAVAEPKIVVEAVEIDGNKIFVAGLADPGRKVRAYANDILLGDALTSPDGHFLIEATRDIPVGSY
TIHVDGLDADGVKVVARAAVPFEREPGEAVAAVAPAGTKPADAKPAAPAAAEAPAAPAPAAPAAPAAEAPAVVVAPTPPS
DVPEAVAPKLEHADGAVIIRRNDTLWRISRRVYGHGVRYSTIYLANQDQIRDPDHIWPGQVFKVPEKSKEGEAADLKAMG
EQATTAPTKKQ

Sequences:

>Translated_491_residues
MAINPLKAFLFAAGGTVAAAGTAYVSGALDPYLHPTPPAKVAALTPPEAPKPADPGTEGRLPAPAVPAAPAAAPQATAPA
ASATEATAPAAPAPAAPAAAGPTAPTFDVVRVESNGSIVIAGNAAPNSKVEILSGTAVLGSTVAGADGAFVIVLDDPLKP
GDYTITLHSTVGTVVTVSVQTAVVSVPKNAAGQVLAMVEEPGKPAELLTVPAPETKLAAPATGDQAAAPAAPGPAPAAEA
PATAAPAPAAPATPPAAVAEPKIVVEAVEIDGNKIFVAGLADPGRKVRAYANDILLGDALTSPDGHFLIEATRDIPVGSY
TIHVDGLDADGVKVVARAAVPFEREPGEAVAAVAPAGTKPADAKPAAPAAAEAPAAPAPAAPAAPAAEAPAVVVAPTPPS
DVPEAVAPKLEHADGAVIIRRNDTLWRISRRVYGHGVRYSTIYLANQDQIRDPDHIWPGQVFKVPEKSKEGEAADLKAMG
EQATTAPTKKQ
>Mature_490_residues
AINPLKAFLFAAGGTVAAAGTAYVSGALDPYLHPTPPAKVAALTPPEAPKPADPGTEGRLPAPAVPAAPAAAPQATAPAA
SATEATAPAAPAPAAPAAAGPTAPTFDVVRVESNGSIVIAGNAAPNSKVEILSGTAVLGSTVAGADGAFVIVLDDPLKPG
DYTITLHSTVGTVVTVSVQTAVVSVPKNAAGQVLAMVEEPGKPAELLTVPAPETKLAAPATGDQAAAPAAPGPAPAAEAP
ATAAPAPAAPATPPAAVAEPKIVVEAVEIDGNKIFVAGLADPGRKVRAYANDILLGDALTSPDGHFLIEATRDIPVGSYT
IHVDGLDADGVKVVARAAVPFEREPGEAVAAVAPAGTKPADAKPAAPAAAEAPAAPAPAAPAAPAAEAPAVVVAPTPPSD
VPEAVAPKLEHADGAVIIRRNDTLWRISRRVYGHGVRYSTIYLANQDQIRDPDHIWPGQVFKVPEKSKEGEAADLKAMGE
QATTAPTKKQ

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 4340 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48651; Mature: 48520

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINPLKAFLFAAGGTVAAAGTAYVSGALDPYLHPTPPAKVAALTPPEAPKPADPGTEGR
CCCCHHHHHHEECCCCEEECCHHEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
LPAPAVPAAPAAAPQATAPAASATEATAPAAPAPAAPAAAGPTAPTFDVVRVESNGSIVI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEE
AGNAAPNSKVEILSGTAVLGSTVAGADGAFVIVLDDPLKPGDYTITLHSTVGTVVTVSVQ
ECCCCCCCEEEEEECCEEECCEECCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEEEE
TAVVSVPKNAAGQVLAMVEEPGKPAELLTVPAPETKLAAPATGDQAAAPAAPGPAPAAEA
EEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PATAAPAPAAPATPPAAVAEPKIVVEAVEIDGNKIFVAGLADPGRKVRAYANDILLGDAL
CCCCCCCCCCCCCCCHHHCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHCEEEEECCC
TSPDGHFLIEATRDIPVGSYTIHVDGLDADGVKVVARAAVPFEREPGEAVAAVAPAGTKP
CCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCC
ADAKPAAPAAAEAPAAPAPAAPAAPAAEAPAVVVAPTPPSDVPEAVAPKLEHADGAVIIR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCEEEEE
RNDTLWRISRRVYGHGVRYSTIYLANQDQIRDPDHIWPGQVFKVPEKSKEGEAADLKAMG
ECCCCEEHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHC
EQATTAPTKKQ
CHHCCCCCCCC
>Mature Secondary Structure 
AINPLKAFLFAAGGTVAAAGTAYVSGALDPYLHPTPPAKVAALTPPEAPKPADPGTEGR
CCCHHHHHHEECCCCEEECCHHEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
LPAPAVPAAPAAAPQATAPAASATEATAPAAPAPAAPAAAGPTAPTFDVVRVESNGSIVI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEE
AGNAAPNSKVEILSGTAVLGSTVAGADGAFVIVLDDPLKPGDYTITLHSTVGTVVTVSVQ
ECCCCCCCEEEEEECCEEECCEECCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEEEE
TAVVSVPKNAAGQVLAMVEEPGKPAELLTVPAPETKLAAPATGDQAAAPAAPGPAPAAEA
EEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PATAAPAPAAPATPPAAVAEPKIVVEAVEIDGNKIFVAGLADPGRKVRAYANDILLGDAL
CCCCCCCCCCCCCCCHHHCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHCEEEEECCC
TSPDGHFLIEATRDIPVGSYTIHVDGLDADGVKVVARAAVPFEREPGEAVAAVAPAGTKP
CCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCC
ADAKPAAPAAAEAPAAPAPAAPAAPAAEAPAVVVAPTPPSDVPEAVAPKLEHADGAVIIR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCEEEEE
RNDTLWRISRRVYGHGVRYSTIYLANQDQIRDPDHIWPGQVFKVPEKSKEGEAADLKAMG
ECCCCEEHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHC
EQATTAPTKKQ
CHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA