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The map label for this gene is 13476454

Identifier: 13476454

GI number: 13476454

Start: 6441306

End: 6442196

Strand: Direct

Name: 13476454

Synonym: mlr7780

Alternate gene names: NA

Gene position: 6441306-6442196 (Clockwise)

Preceding gene: 13476452

Following gene: 13476459

Centisome position: 91.55

GC content: 61.28

Gene sequence:

>891_bases
ATGGACCATCGCGACATCATCGCGTCACTTGCTCCCGAAGAGCGCAGTCGCCTGACCGCCAAGTCCAACGCTGCGGGTCT
CGTTCAGCTCGGCGCTCATTGGGGGGCGATTGCGATCATCGGATCGCTGATCGCCGCGAAAGTACCATTCTGGCCGCTCC
TGATGCTGCCGCAAGGCATCCTGATCGTCTTCCTGTTCACGCTGCTGCATGAGACGGTTCATCGCACGGCCTTCGACACG
CAGTGGCTGAACGATTTCGTGGCGCGGGTGTGCAGCCTGGCGCTGGCGCTGCCGGCCGACTGGTTCCGCTATTTCCATTT
CGCCCATCACCGCTTCACGCAGGACCCCGAGAACGATCCGGAGCTGGCGTTTCCCAAGCCGGAAACGCTGCGGCAGTACC
TCGTGCATGTTTCCGGCATCCCGCTGTGGTGGGGCCATCTCAAGACGCTCTACGCCAATGCGGTTGGCGGCAGCCAGGAG
AGCTATGTGCCGCCGAAAGGCCGGCCCAAGGTGCGGGCCGAAGCGTGCGCCATGATTGCCTTCTACGCCGTCGTCCTTCT
GCTCGCCGTCTATTTTCGGCTCTCCGTGCTTGTCTATGTCTGGATCATTCCCGCTCTGTTGGGACAGCCGTTTCTGCGCC
TCTATCTGCTCGCCGAACACGGCCGCTGCCCGTTCGTGGCCAACATGCTGGAGAATACGAGAACCACGCTGACCAACTGG
GTAGTGCGCAAGCTCGCCTGGAACATGCCGTTCCATGCCGAGCATCACGCCTATCCCGGCGTGCCGTTTCACCAATTGCC
GCAGTTTCACGCACTGATCGAGCGGCATCTGAAGGTGGTCGAGCCCGGCTATGTCAGCTTCCACGAGAAATATGTGGAAA
CGTTGCGTTGA

Upstream 100 bases:

>100_bases
ATAAGATGGACTTATCAAAATCGCAGGAATCGTCGTTTTTGAAAAGTTTTTTCACCAACTAGAATAGGCCTTATCAAGTC
GCCAGCCCGGATCGAAACCG

Downstream 100 bases:

>100_bases
TGAAGATGCGCGGTCGGCAACCGGTCGCACCCGCTGAGGACGCGACCGGCGTGAGGGGCTAGACCTGTGCGGTGCCGCCG
TCGACGAACAGCTCAGCCCC

Product: rhizopine catabolism protein mocD

Products: NA

Alternate protein names: Hydrocarbon Oxygenase MocD; Fatty Acid Desaturase Subfamily; Omega-3 Fatty Acid Desaturase Transmembrane Protein; Desaturase; Oxidoreductase; Transmembrane Fatty Acid Desaturase; Prolyl 4-Hydroxylase Subunit Alpha; Rieske Domain-Containing Protein; Fatty Acid Desaturase Subfamily Protein; Hydrocarbon Oxygenase; Rhizopine Catabolism Protein MocD; Rhizopine Catabolism Protein; Hydrocarbon Oxigenase Protein

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MDHRDIIASLAPEERSRLTAKSNAAGLVQLGAHWGAIAIIGSLIAAKVPFWPLLMLPQGILIVFLFTLLHETVHRTAFDT
QWLNDFVARVCSLALALPADWFRYFHFAHHRFTQDPENDPELAFPKPETLRQYLVHVSGIPLWWGHLKTLYANAVGGSQE
SYVPPKGRPKVRAEACAMIAFYAVVLLLAVYFRLSVLVYVWIIPALLGQPFLRLYLLAEHGRCPFVANMLENTRTTLTNW
VVRKLAWNMPFHAEHHAYPGVPFHQLPQFHALIERHLKVVEPGYVSFHEKYVETLR

Sequences:

>Translated_296_residues
MDHRDIIASLAPEERSRLTAKSNAAGLVQLGAHWGAIAIIGSLIAAKVPFWPLLMLPQGILIVFLFTLLHETVHRTAFDT
QWLNDFVARVCSLALALPADWFRYFHFAHHRFTQDPENDPELAFPKPETLRQYLVHVSGIPLWWGHLKTLYANAVGGSQE
SYVPPKGRPKVRAEACAMIAFYAVVLLLAVYFRLSVLVYVWIIPALLGQPFLRLYLLAEHGRCPFVANMLENTRTTLTNW
VVRKLAWNMPFHAEHHAYPGVPFHQLPQFHALIERHLKVVEPGYVSFHEKYVETLR
>Mature_296_residues
MDHRDIIASLAPEERSRLTAKSNAAGLVQLGAHWGAIAIIGSLIAAKVPFWPLLMLPQGILIVFLFTLLHETVHRTAFDT
QWLNDFVARVCSLALALPADWFRYFHFAHHRFTQDPENDPELAFPKPETLRQYLVHVSGIPLWWGHLKTLYANAVGGSQE
SYVPPKGRPKVRAEACAMIAFYAVVLLLAVYFRLSVLVYVWIIPALLGQPFLRLYLLAEHGRCPFVANMLENTRTTLTNW
VVRKLAWNMPFHAEHHAYPGVPFHQLPQFHALIERHLKVVEPGYVSFHEKYVETLR

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33826; Mature: 33826

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHRDIIASLAPEERSRLTAKSNAAGLVQLGAHWGAIAIIGSLIAAKVPFWPLLMLPQGI
CCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LIVFLFTLLHETVHRTAFDTQWLNDFVARVCSLALALPADWFRYFHFAHHRFTQDPENDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ELAFPKPETLRQYLVHVSGIPLWWGHLKTLYANAVGGSQESYVPPKGRPKVRAEACAMIA
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
FYAVVLLLAVYFRLSVLVYVWIIPALLGQPFLRLYLLAEHGRCPFVANMLENTRTTLTNW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VVRKLAWNMPFHAEHHAYPGVPFHQLPQFHALIERHLKVVEPGYVSFHEKYVETLR
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MDHRDIIASLAPEERSRLTAKSNAAGLVQLGAHWGAIAIIGSLIAAKVPFWPLLMLPQGI
CCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LIVFLFTLLHETVHRTAFDTQWLNDFVARVCSLALALPADWFRYFHFAHHRFTQDPENDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ELAFPKPETLRQYLVHVSGIPLWWGHLKTLYANAVGGSQESYVPPKGRPKVRAEACAMIA
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
FYAVVLLLAVYFRLSVLVYVWIIPALLGQPFLRLYLLAEHGRCPFVANMLENTRTTLTNW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VVRKLAWNMPFHAEHHAYPGVPFHQLPQFHALIERHLKVVEPGYVSFHEKYVETLR
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA