Click here to switch to the map view.

The map label for this gene is 13476409

Identifier: 13476409

GI number: 13476409

Start: 6394252

End: 6395277

Strand: Reverse

Name: 13476409

Synonym: mll7723

Alternate gene names: NA

Gene position: 6395277-6394252 (Counterclockwise)

Preceding gene: 13476410

Following gene: 13476406

Centisome position: 90.89

GC content: 60.82

Gene sequence:

>1026_bases
GTGTCGAGCAGAATTCGCCTATCGAGCGATACCCGGCCAGCAGGTGGTCATCAAGCAGGTCATCTGTTCTTGAGGCGAGG
ACGAACCATGCTCCGTTTCGCTATGCTGTCGGCCGCCCTGCTGTTGCCGACCGTTGCCTGGGCCCAAAGCTGCAGCTTTG
GCGTATCGGCGATGAATTTCGGGCTGGTCGATACGCTTTCCGGTTCGTCAAGCAATTCAACCGCCACACTCAGCGTAAAC
TGCACTGGATTGTTGTTGCAGCGCATCCTCGTCTGCCCAAATCTGGGTACGGGCAGCGGCGGTGCCACGGCTTCGGCCCG
TCAGATGCTGAGCGGCGCCAATGATCTCAACTACCAGCTTTATTCGGATTCCGCGCGCTCGGTGGTGTGGGGCTCCTATG
CGTGGCCGTATCCGCCGACAGCGCCGGGCTTTGCGCTGACGCTGAACGTGCTCGGCAGCGGTTCGGCCAGCCAGACGATC
TATGGCGCCATATTGGGTGGACAGGCGACCGCGGTGCCGTCGACCTACCTCTCCACATTTTCTGGGAGCCACGTCGAGTT
CCGCTATCGAGCCACTCCCGGCAACGATTGCAGCACCGGCGCAGGCTCCGTCGACAGACCCACATTCACGATCAACGCGA
TCGTTCCGGCCAATTGTCTGCTGGCAATCCAGAACATCGATTTCGGATCAAACGGCATTCTGGGCGCCAATGTCGATGCA
ACTGGCGGGGTTTCCATCACCTGCACCCCGGGCACGCCCTACACAGTGTCGCTCAGCAACGGAACGACTGGTTCGGCCCC
AACCGCGCGCAAGATGTCCAAGGGCGTGGAAACCGTAACCTACGGCCTCTACAAGGATAACGCACGCAGCCAGGTGTGGG
GCGACGCGGCGATGCCAGGCAGTACTGTTGCGGGAAGCGGCAGCGGTGCGGCGCAAAATCTCACCATCTACGGCCGTGTT
CCCGCTCAAACGACACCTTCGGCCGGCGTCTATACCGATACCGTTGTCGTTACCGTGACCTATTAG

Upstream 100 bases:

>100_bases
GTGCCGACGAGGAATTCGTGATCGGCTATGACGGCGAGGCCTACATCCGCACCCTCCACCGACAAAATGCCGTGGCCATT
GAATTGCCGGACGGCACCTC

Downstream 100 bases:

>100_bases
GCCGCTGCATCAGAGCGCCGCGCGTCCAGAAGAACGCGCGGCGCTGCAATGCCACTAGGTGATGTCAGCGACTACTGCGC
GATCGGCGCGTATTTGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Spore Coat Protein U; Signal Peptide Protein; Lipoprotein; Spore Coat Protein U Domain-Containing; Spore Coat Protein U Domain Protein; Spore Coat U Domain Protein; Secreted Protein-Like; Spore Coat Protein U Domain Family; Exported Lipoprotein

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSSRIRLSSDTRPAGGHQAGHLFLRRGRTMLRFAMLSAALLLPTVAWAQSCSFGVSAMNFGLVDTLSGSSSNSTATLSVN
CTGLLLQRILVCPNLGTGSGGATASARQMLSGANDLNYQLYSDSARSVVWGSYAWPYPPTAPGFALTLNVLGSGSASQTI
YGAILGGQATAVPSTYLSTFSGSHVEFRYRATPGNDCSTGAGSVDRPTFTINAIVPANCLLAIQNIDFGSNGILGANVDA
TGGVSITCTPGTPYTVSLSNGTTGSAPTARKMSKGVETVTYGLYKDNARSQVWGDAAMPGSTVAGSGSGAAQNLTIYGRV
PAQTTPSAGVYTDTVVVTVTY

Sequences:

>Translated_341_residues
MSSRIRLSSDTRPAGGHQAGHLFLRRGRTMLRFAMLSAALLLPTVAWAQSCSFGVSAMNFGLVDTLSGSSSNSTATLSVN
CTGLLLQRILVCPNLGTGSGGATASARQMLSGANDLNYQLYSDSARSVVWGSYAWPYPPTAPGFALTLNVLGSGSASQTI
YGAILGGQATAVPSTYLSTFSGSHVEFRYRATPGNDCSTGAGSVDRPTFTINAIVPANCLLAIQNIDFGSNGILGANVDA
TGGVSITCTPGTPYTVSLSNGTTGSAPTARKMSKGVETVTYGLYKDNARSQVWGDAAMPGSTVAGSGSGAAQNLTIYGRV
PAQTTPSAGVYTDTVVVTVTY
>Mature_340_residues
SSRIRLSSDTRPAGGHQAGHLFLRRGRTMLRFAMLSAALLLPTVAWAQSCSFGVSAMNFGLVDTLSGSSSNSTATLSVNC
TGLLLQRILVCPNLGTGSGGATASARQMLSGANDLNYQLYSDSARSVVWGSYAWPYPPTAPGFALTLNVLGSGSASQTIY
GAILGGQATAVPSTYLSTFSGSHVEFRYRATPGNDCSTGAGSVDRPTFTINAIVPANCLLAIQNIDFGSNGILGANVDAT
GGVSITCTPGTPYTVSLSNGTTGSAPTARKMSKGVETVTYGLYKDNARSQVWGDAAMPGSTVAGSGSGAAQNLTIYGRVP
AQTTPSAGVYTDTVVVTVTY

Specific function: Unknown

COG id: COG5430

COG function: function code S; Uncharacterized secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34921; Mature: 34789

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRIRLSSDTRPAGGHQAGHLFLRRGRTMLRFAMLSAALLLPTVAWAQSCSFGVSAMNF
CCCCEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
GLVDTLSGSSSNSTATLSVNCTGLLLQRILVCPNLGTGSGGATASARQMLSGANDLNYQL
CEEEECCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEE
YSDSARSVVWGSYAWPYPPTAPGFALTLNVLGSGSASQTIYGAILGGQATAVPSTYLSTF
ECCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHC
SGSHVEFRYRATPGNDCSTGAGSVDRPTFTINAIVPANCLLAIQNIDFGSNGILGANVDA
CCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCEEECCCCC
TGGVSITCTPGTPYTVSLSNGTTGSAPTARKMSKGVETVTYGLYKDNARSQVWGDAAMPG
CCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCCCHHCCCCCCCCC
STVAGSGSGAAQNLTIYGRVPAQTTPSAGVYTDTVVVTVTY
CCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure 
SSRIRLSSDTRPAGGHQAGHLFLRRGRTMLRFAMLSAALLLPTVAWAQSCSFGVSAMNF
CCCEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
GLVDTLSGSSSNSTATLSVNCTGLLLQRILVCPNLGTGSGGATASARQMLSGANDLNYQL
CEEEECCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEE
YSDSARSVVWGSYAWPYPPTAPGFALTLNVLGSGSASQTIYGAILGGQATAVPSTYLSTF
ECCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHC
SGSHVEFRYRATPGNDCSTGAGSVDRPTFTINAIVPANCLLAIQNIDFGSNGILGANVDA
CCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCEEECCCCC
TGGVSITCTPGTPYTVSLSNGTTGSAPTARKMSKGVETVTYGLYKDNARSQVWGDAAMPG
CCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCCCHHCCCCCCCCC
STVAGSGSGAAQNLTIYGRVPAQTTPSAGVYTDTVVVTVTY
CCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA