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The map label for this gene is ccmH [H]

Identifier: 13476387

GI number: 13476387

Start: 6366671

End: 6367138

Strand: Direct

Name: ccmH [H]

Synonym: mlr7691

Alternate gene names: 13476387

Gene position: 6366671-6367138 (Clockwise)

Preceding gene: 13476386

Following gene: 13476388

Centisome position: 90.49

GC content: 66.67

Gene sequence:

>468_bases
ATGAAGGCAAGGTTCTGCGCTGCGTTGCTCGTCCTGATGCTGGCGCTCGGCTTTGCCGGCACGGCGCTGGCGGTGAAGCC
CGACGAGATGCTGGCCGATCCGGCGCTCGAAGCGCGGGCGCGGGCTCTGTCGGAAGGCCTGCGGTGCATGGTCTGCCAGA
ACCAGTCGATCGACGAATCCGATGCCGATCTTGCCCGCGACCTGCGCATCCTGGTGCGCCAGCGCCTCGTCGCCGGCGAT
ACCGACCAGCAGGTCATGGACTATGTGGTTTCGCGCTACGGCGAGTTCGTGCTGCTGAAGCCGCGCTTCGACCTGCGCAA
CGCGCTGCTTTGGGGCACGCCGGTGCTGTTGCTGCTGGTGGGGGGCGTATTCATTGTGCTTACCGCGCGGTCGCGCCGGA
CCCTGGCGACAAAGACCCTGTCGGCCGACGAACAGGCGGCATTGGACGCTATCCTGCACCGCGACTGA

Upstream 100 bases:

>100_bases
TGGCGGGCGCGGCCATGTCGCTGATGGACAGGCGCCTGCGCGTCGGCGCGCCTTCGCGCCGGCGCAAGCAGGCGAGCGCC
GTGACGCCCGCGGTCCTGCC

Downstream 100 bases:

>100_bases
CGGCTGCTGTCGCCCGCCAACATTACCAAAGTTTCATGCGTCGGAAATGGCGCTGTAATGTGCGCCGCTCTAATTCTCCT
TTCCTGAGGATGCCGATCAA

Product: cytochrome C-type biogenesis protein CycL

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycL [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKARFCAALLVLMLALGFAGTALAVKPDEMLADPALEARARALSEGLRCMVCQNQSIDESDADLARDLRILVRQRLVAGD
TDQQVMDYVVSRYGEFVLLKPRFDLRNALLWGTPVLLLLVGGVFIVLTARSRRTLATKTLSADEQAALDAILHRD

Sequences:

>Translated_155_residues
MKARFCAALLVLMLALGFAGTALAVKPDEMLADPALEARARALSEGLRCMVCQNQSIDESDADLARDLRILVRQRLVAGD
TDQQVMDYVVSRYGEFVLLKPRFDLRNALLWGTPVLLLLVGGVFIVLTARSRRTLATKTLSADEQAALDAILHRD
>Mature_155_residues
MKARFCAALLVLMLALGFAGTALAVKPDEMLADPALEARARALSEGLRCMVCQNQSIDESDADLARDLRILVRQRLVAGD
TDQQVMDYVVSRYGEFVLLKPRFDLRNALLWGTPVLLLLVGGVFIVLTARSRRTLATKTLSADEQAALDAILHRD

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmH/CycL/Ccl2/NrfF family [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=122, Percent_Identity=38.5245901639344, Blast_Score=84, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 17041; Mature: 17041

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARFCAALLVLMLALGFAGTALAVKPDEMLADPALEARARALSEGLRCMVCQNQSIDES
CCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCHHHHHHHHHHHHCCEEEEECCCCCCCC
DADLARDLRILVRQRLVAGDTDQQVMDYVVSRYGEFVLLKPRFDLRNALLWGTPVLLLLV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHH
GGVFIVLTARSRRTLATKTLSADEQAALDAILHRD
HHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKARFCAALLVLMLALGFAGTALAVKPDEMLADPALEARARALSEGLRCMVCQNQSIDES
CCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCHHHHHHHHHHHHCCEEEEECCCCCCCC
DADLARDLRILVRQRLVAGDTDQQVMDYVVSRYGEFVLLKPRFDLRNALLWGTPVLLLLV
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHH
GGVFIVLTARSRRTLATKTLSADEQAALDAILHRD
HHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7715602; 11481430 [H]