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The map label for this gene is potC [H]

Identifier: 13476377

GI number: 13476377

Start: 6357326

End: 6358132

Strand: Direct

Name: potC [H]

Synonym: mlr7678

Alternate gene names: 13476377

Gene position: 6357326-6358132 (Clockwise)

Preceding gene: 13476376

Following gene: 13476378

Centisome position: 90.35

GC content: 64.44

Gene sequence:

>807_bases
ATGCCGACCTATCGCCCCGGACCCGTCTCGCTGATCCTCGCCGCCCTTGTGGCGCTGTTCCTGCTGATGCCGCTGCTGGC
GGTCATCCCGGTGTCGCTGACGCCAAGCCGCATGCTGGCGATGCCGACGGGCGAACTGTCGCTGCGCCACTATCGCTCGC
TGATCGAGGATCCGCGCTGGCTCCAGTCGATCCTGCTGTCGATCCGCATCGGCGTCGTGAGCAGCGCGATTTCCACGGTG
CTGGCGCTCTGCTTCAGCCTTGGCGTGTGGATGTTCCAGCCCCGCTTCACCGCCGCGCTCGTCGGCTTCGTGTTGTTGCC
GATGGTGGTGCCGCCGGTGGTCTCGGCGATCACTCTCTACTTCCTGCTGACCTCGATCTCCGGCTTCAGCTCGTTCTTCG
GCTACGACACTTGGCTCGGCGTCGCCATGGCGCATTCGGTGATGACGGTACCTTTCGCCACGGTACTGATCCTGGTCTCG
CTCAGCCAGCTGGACCGGCGCATCGACCTTGCGGCGCGCGGCCTTGGCGCAACTGTCTGGGAGCGCGCCACGCGCATCAT
CATGCCCAACATCAAGTTCGGCATCATCACAGCAGCGCTTTTGTCCTTCGTCCTTTCCTGGGAAGAGATCGGCGTCACGC
TGTTCATCACCTCGGTCAACGCCATCACGCTGCCGCGCCTGATGTGGATGGGTCTGCGCGACAACATCGACCCGGCGATC
GCCGCCCTTTCGGTGATCCTGATCATCATCACGGTGCTGGTTCTGGCGGTGCGCAGTGTGATGACCCGGCAGCGCGCCGG
GCACTAG

Upstream 100 bases:

>100_bases
ACTGGGGGCTGGGAGCGGCGATTAGCGTCGTGCTGGTGCTGTTCGTCGGCGCGCTGATGGCGCTGCTGTTCCGCTATGTC
AGACCGAAGCAGTTGATCTG

Downstream 100 bases:

>100_bases
ACAAACCGCACCGAGATGCGGCCGAGCCTGGCCCGTCTCCTCGACTTCATTCACGATGCGGCGCTAAATAGACAAAGCAC
TGGCGTTCATGGGAGGTGAT

Product: ABC transporter, permease protein

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MPTYRPGPVSLILAALVALFLLMPLLAVIPVSLTPSRMLAMPTGELSLRHYRSLIEDPRWLQSILLSIRIGVVSSAISTV
LALCFSLGVWMFQPRFTAALVGFVLLPMVVPPVVSAITLYFLLTSISGFSSFFGYDTWLGVAMAHSVMTVPFATVLILVS
LSQLDRRIDLAARGLGATVWERATRIIMPNIKFGIITAALLSFVLSWEEIGVTLFITSVNAITLPRLMWMGLRDNIDPAI
AALSVILIIITVLVLAVRSVMTRQRAGH

Sequences:

>Translated_268_residues
MPTYRPGPVSLILAALVALFLLMPLLAVIPVSLTPSRMLAMPTGELSLRHYRSLIEDPRWLQSILLSIRIGVVSSAISTV
LALCFSLGVWMFQPRFTAALVGFVLLPMVVPPVVSAITLYFLLTSISGFSSFFGYDTWLGVAMAHSVMTVPFATVLILVS
LSQLDRRIDLAARGLGATVWERATRIIMPNIKFGIITAALLSFVLSWEEIGVTLFITSVNAITLPRLMWMGLRDNIDPAI
AALSVILIIITVLVLAVRSVMTRQRAGH
>Mature_267_residues
PTYRPGPVSLILAALVALFLLMPLLAVIPVSLTPSRMLAMPTGELSLRHYRSLIEDPRWLQSILLSIRIGVVSSAISTVL
ALCFSLGVWMFQPRFTAALVGFVLLPMVVPPVVSAITLYFLLTSISGFSSFFGYDTWLGVAMAHSVMTVPFATVLILVSL
SQLDRRIDLAARGLGATVWERATRIIMPNIKFGIITAALLSFVLSWEEIGVTLFITSVNAITLPRLMWMGLRDNIDPAIA
ALSVILIIITVLVLAVRSVMTRQRAGH

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=220, Percent_Identity=24.0909090909091, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1787081, Length=232, Percent_Identity=27.5862068965517, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1788764, Length=187, Percent_Identity=26.2032085561497, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29275; Mature: 29144

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTYRPGPVSLILAALVALFLLMPLLAVIPVSLTPSRMLAMPTGELSLRHYRSLIEDPRW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCHHHHHHHHHHHCCHHH
LQSILLSIRIGVVSSAISTVLALCFSLGVWMFQPRFTAALVGFVLLPMVVPPVVSAITLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLTSISGFSSFFGYDTWLGVAMAHSVMTVPFATVLILVSLSQLDRRIDLAARGLGATVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ERATRIIMPNIKFGIITAALLSFVLSWEEIGVTLFITSVNAITLPRLMWMGLRDNIDPAI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCHHH
AALSVILIIITVLVLAVRSVMTRQRAGH
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTYRPGPVSLILAALVALFLLMPLLAVIPVSLTPSRMLAMPTGELSLRHYRSLIEDPRW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCHHHHHHHHHHHCCHHH
LQSILLSIRIGVVSSAISTVLALCFSLGVWMFQPRFTAALVGFVLLPMVVPPVVSAITLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLTSISGFSSFFGYDTWLGVAMAHSVMTVPFATVLILVSLSQLDRRIDLAARGLGATVW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ERATRIIMPNIKFGIITAALLSFVLSWEEIGVTLFITSVNAITLPRLMWMGLRDNIDPAI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCHHH
AALSVILIIITVLVLAVRSVMTRQRAGH
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]