| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476286
Identifier: 13476286
GI number: 13476286
Start: 6251207
End: 6252139
Strand: Direct
Name: 13476286
Synonym: mlr7566
Alternate gene names: NA
Gene position: 6251207-6252139 (Clockwise)
Preceding gene: 13476282
Following gene: 13476288
Centisome position: 88.85
GC content: 63.13
Gene sequence:
>933_bases GTGGATAGGGCAGATCTGCGCATAGCGGTGCTGATGGGCACGAAAGACGGCGCCCCGTTCATAGATGAGCAGTTGCAATC CCTGCTCGCCCAGTCGCATCCGCTCATCGACCTCTGGATCTCCGATGATGGCTCCGTCGACGGCACGGTTCCCATCATTG AAGCCTGGAAATCCCGCTGGACAAAGGGTCGAGTAACGTTGGTGCAGGGGCCGCGCGAAGGCTTCGCTGCCAATTTTCGT TCGATGATACTCGACCGGCGTATCGATGCCGACTTCTACGCCTTCAGCGATCAGGACGATGTCTGGGAGCCGGACAGGCT GGAAAGTGCCGTCCAATGGATGCAGGCTTTCGGCGCGGAACCCCCGTTGATGTTCTGCTCGCGAACCGCGACCATGACCG AAACGGGTAGCCTTGCCGGCCACTCGCCATTGTTTCGGCGGCCGCCATCCTTCCGCAACGCGCTCGTGCAAAGCATCGCC GGCGGCAACACTATCCTGCTCAATCGCGCGGCACGGGACCTGTTGGCAAGGGCTTCGGCACGCACGGGCTTCGTCAGCCA CGACTGGTGGGCCTATCTGGTTGTAACCGGGGCCGGCGGCGTCGTCCACTACGACCCGCGGCCCCTGGTGCGCTACCGGC AGCACGCGGCGAACCTTGTCGGCGCCAACGTGTCGTGGGCGGCAAGGGTCTCGCGGCTTGGGCGTCTGTTCAAGGGCGAG TTTGCCGACTGGACCGATCTCAACCTTGCCGGTTTGGCGGTCAATCGCGACCTGCTCACGCCGGATGCCGCGACGTGCCT CGACCTGTTCGCAAGTGGTCGGCAGGGCAGTCTTTTCCAGCGTTTGCGCACTCTGCTCGTAAGCGGTGTCTATCGGCAGA CCCTTGCCGGGACGCTGGGGCTTTATCTCGCATTCGTCCTGGGTCGCATCTGA
Upstream 100 bases:
>100_bases GGAGCCTAGCGCCATCCGATGAAGCTGGAATCTGTATTCGGACTTCGGCCACTGATGCGCCTCGCCTCCATGAAGAACTC AGGCAGGGTGTTCGACATTC
Downstream 100 bases:
>100_bases AATCGAATCGCTTCAAGGCGCGTGGTCTAGCGGTGACCTCGTGCTCCATTGGCCAGTGCGAGAACCACTTTCCGTAAGAC GGCCGCTGTTTAGTCCGTGG
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase; Alpha-L-Rha Alpha-1 3-L-Rhamnosyltransferase; Glycosyl Transferase Group 2 Family; Rhamnosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Polysaccharide Biosynthesis Protein/ Rhamnosyl Transferase; Family 2 Glycosyl Transferase; Rhamnosyltransferase RgpB; Alpha-L-Rhaalpha-1 3-L-Rhamnosyltransferase; Family 2 Glycosyltransferase; Polysaccharide Biosynthesis Protein/ Rhamnosyltransferase; Glycosyltransferase-Like Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Cell Wall Biosynthesis Glycosyltransferase
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MDRADLRIAVLMGTKDGAPFIDEQLQSLLAQSHPLIDLWISDDGSVDGTVPIIEAWKSRWTKGRVTLVQGPREGFAANFR SMILDRRIDADFYAFSDQDDVWEPDRLESAVQWMQAFGAEPPLMFCSRTATMTETGSLAGHSPLFRRPPSFRNALVQSIA GGNTILLNRAARDLLARASARTGFVSHDWWAYLVVTGAGGVVHYDPRPLVRYRQHAANLVGANVSWAARVSRLGRLFKGE FADWTDLNLAGLAVNRDLLTPDAATCLDLFASGRQGSLFQRLRTLLVSGVYRQTLAGTLGLYLAFVLGRI
Sequences:
>Translated_310_residues MDRADLRIAVLMGTKDGAPFIDEQLQSLLAQSHPLIDLWISDDGSVDGTVPIIEAWKSRWTKGRVTLVQGPREGFAANFR SMILDRRIDADFYAFSDQDDVWEPDRLESAVQWMQAFGAEPPLMFCSRTATMTETGSLAGHSPLFRRPPSFRNALVQSIA GGNTILLNRAARDLLARASARTGFVSHDWWAYLVVTGAGGVVHYDPRPLVRYRQHAANLVGANVSWAARVSRLGRLFKGE FADWTDLNLAGLAVNRDLLTPDAATCLDLFASGRQGSLFQRLRTLLVSGVYRQTLAGTLGLYLAFVLGRI >Mature_310_residues MDRADLRIAVLMGTKDGAPFIDEQLQSLLAQSHPLIDLWISDDGSVDGTVPIIEAWKSRWTKGRVTLVQGPREGFAANFR SMILDRRIDADFYAFSDQDDVWEPDRLESAVQWMQAFGAEPPLMFCSRTATMTETGSLAGHSPLFRRPPSFRNALVQSIA GGNTILLNRAARDLLARASARTGFVSHDWWAYLVVTGAGGVVHYDPRPLVRYRQHAANLVGANVSWAARVSRLGRLFKGE FADWTDLNLAGLAVNRDLLTPDAATCLDLFASGRQGSLFQRLRTLLVSGVYRQTLAGTLGLYLAFVLGRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34237; Mature: 34237
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRADLRIAVLMGTKDGAPFIDEQLQSLLAQSHPLIDLWISDDGSVDGTVPIIEAWKSRW CCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCC TKGRVTLVQGPREGFAANFRSMILDRRIDADFYAFSDQDDVWEPDRLESAVQWMQAFGAE CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC PPLMFCSRTATMTETGSLAGHSPLFRRPPSFRNALVQSIAGGNTILLNRAARDLLARASA CCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH RTGFVSHDWWAYLVVTGAGGVVHYDPRPLVRYRQHAANLVGANVSWAARVSRLGRLFKGE CCCCCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC FADWTDLNLAGLAVNRDLLTPDAATCLDLFASGRQGSLFQRLRTLLVSGVYRQTLAGTLG CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LYLAFVLGRI HHHHHHHHCC >Mature Secondary Structure MDRADLRIAVLMGTKDGAPFIDEQLQSLLAQSHPLIDLWISDDGSVDGTVPIIEAWKSRW CCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCC TKGRVTLVQGPREGFAANFRSMILDRRIDADFYAFSDQDDVWEPDRLESAVQWMQAFGAE CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC PPLMFCSRTATMTETGSLAGHSPLFRRPPSFRNALVQSIAGGNTILLNRAARDLLARASA CCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH RTGFVSHDWWAYLVVTGAGGVVHYDPRPLVRYRQHAANLVGANVSWAARVSRLGRLFKGE CCCCCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC FADWTDLNLAGLAVNRDLLTPDAATCLDLFASGRQGSLFQRLRTLLVSGVYRQTLAGTLG CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LYLAFVLGRI HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA