Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13476286

Identifier: 13476286

GI number: 13476286

Start: 6251207

End: 6252139

Strand: Direct

Name: 13476286

Synonym: mlr7566

Alternate gene names: NA

Gene position: 6251207-6252139 (Clockwise)

Preceding gene: 13476282

Following gene: 13476288

Centisome position: 88.85

GC content: 63.13

Gene sequence:

>933_bases
GTGGATAGGGCAGATCTGCGCATAGCGGTGCTGATGGGCACGAAAGACGGCGCCCCGTTCATAGATGAGCAGTTGCAATC
CCTGCTCGCCCAGTCGCATCCGCTCATCGACCTCTGGATCTCCGATGATGGCTCCGTCGACGGCACGGTTCCCATCATTG
AAGCCTGGAAATCCCGCTGGACAAAGGGTCGAGTAACGTTGGTGCAGGGGCCGCGCGAAGGCTTCGCTGCCAATTTTCGT
TCGATGATACTCGACCGGCGTATCGATGCCGACTTCTACGCCTTCAGCGATCAGGACGATGTCTGGGAGCCGGACAGGCT
GGAAAGTGCCGTCCAATGGATGCAGGCTTTCGGCGCGGAACCCCCGTTGATGTTCTGCTCGCGAACCGCGACCATGACCG
AAACGGGTAGCCTTGCCGGCCACTCGCCATTGTTTCGGCGGCCGCCATCCTTCCGCAACGCGCTCGTGCAAAGCATCGCC
GGCGGCAACACTATCCTGCTCAATCGCGCGGCACGGGACCTGTTGGCAAGGGCTTCGGCACGCACGGGCTTCGTCAGCCA
CGACTGGTGGGCCTATCTGGTTGTAACCGGGGCCGGCGGCGTCGTCCACTACGACCCGCGGCCCCTGGTGCGCTACCGGC
AGCACGCGGCGAACCTTGTCGGCGCCAACGTGTCGTGGGCGGCAAGGGTCTCGCGGCTTGGGCGTCTGTTCAAGGGCGAG
TTTGCCGACTGGACCGATCTCAACCTTGCCGGTTTGGCGGTCAATCGCGACCTGCTCACGCCGGATGCCGCGACGTGCCT
CGACCTGTTCGCAAGTGGTCGGCAGGGCAGTCTTTTCCAGCGTTTGCGCACTCTGCTCGTAAGCGGTGTCTATCGGCAGA
CCCTTGCCGGGACGCTGGGGCTTTATCTCGCATTCGTCCTGGGTCGCATCTGA

Upstream 100 bases:

>100_bases
GGAGCCTAGCGCCATCCGATGAAGCTGGAATCTGTATTCGGACTTCGGCCACTGATGCGCCTCGCCTCCATGAAGAACTC
AGGCAGGGTGTTCGACATTC

Downstream 100 bases:

>100_bases
AATCGAATCGCTTCAAGGCGCGTGGTCTAGCGGTGACCTCGTGCTCCATTGGCCAGTGCGAGAACCACTTTCCGTAAGAC
GGCCGCTGTTTAGTCCGTGG

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Alpha-L-Rha Alpha-1 3-L-Rhamnosyltransferase; Glycosyl Transferase Group 2 Family; Rhamnosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Polysaccharide Biosynthesis Protein/ Rhamnosyl Transferase; Family 2 Glycosyl Transferase; Rhamnosyltransferase RgpB; Alpha-L-Rhaalpha-1 3-L-Rhamnosyltransferase; Family 2 Glycosyltransferase; Polysaccharide Biosynthesis Protein/ Rhamnosyltransferase; Glycosyltransferase-Like Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Cell Wall Biosynthesis Glycosyltransferase

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MDRADLRIAVLMGTKDGAPFIDEQLQSLLAQSHPLIDLWISDDGSVDGTVPIIEAWKSRWTKGRVTLVQGPREGFAANFR
SMILDRRIDADFYAFSDQDDVWEPDRLESAVQWMQAFGAEPPLMFCSRTATMTETGSLAGHSPLFRRPPSFRNALVQSIA
GGNTILLNRAARDLLARASARTGFVSHDWWAYLVVTGAGGVVHYDPRPLVRYRQHAANLVGANVSWAARVSRLGRLFKGE
FADWTDLNLAGLAVNRDLLTPDAATCLDLFASGRQGSLFQRLRTLLVSGVYRQTLAGTLGLYLAFVLGRI

Sequences:

>Translated_310_residues
MDRADLRIAVLMGTKDGAPFIDEQLQSLLAQSHPLIDLWISDDGSVDGTVPIIEAWKSRWTKGRVTLVQGPREGFAANFR
SMILDRRIDADFYAFSDQDDVWEPDRLESAVQWMQAFGAEPPLMFCSRTATMTETGSLAGHSPLFRRPPSFRNALVQSIA
GGNTILLNRAARDLLARASARTGFVSHDWWAYLVVTGAGGVVHYDPRPLVRYRQHAANLVGANVSWAARVSRLGRLFKGE
FADWTDLNLAGLAVNRDLLTPDAATCLDLFASGRQGSLFQRLRTLLVSGVYRQTLAGTLGLYLAFVLGRI
>Mature_310_residues
MDRADLRIAVLMGTKDGAPFIDEQLQSLLAQSHPLIDLWISDDGSVDGTVPIIEAWKSRWTKGRVTLVQGPREGFAANFR
SMILDRRIDADFYAFSDQDDVWEPDRLESAVQWMQAFGAEPPLMFCSRTATMTETGSLAGHSPLFRRPPSFRNALVQSIA
GGNTILLNRAARDLLARASARTGFVSHDWWAYLVVTGAGGVVHYDPRPLVRYRQHAANLVGANVSWAARVSRLGRLFKGE
FADWTDLNLAGLAVNRDLLTPDAATCLDLFASGRQGSLFQRLRTLLVSGVYRQTLAGTLGLYLAFVLGRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34237; Mature: 34237

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRADLRIAVLMGTKDGAPFIDEQLQSLLAQSHPLIDLWISDDGSVDGTVPIIEAWKSRW
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCC
TKGRVTLVQGPREGFAANFRSMILDRRIDADFYAFSDQDDVWEPDRLESAVQWMQAFGAE
CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC
PPLMFCSRTATMTETGSLAGHSPLFRRPPSFRNALVQSIAGGNTILLNRAARDLLARASA
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
RTGFVSHDWWAYLVVTGAGGVVHYDPRPLVRYRQHAANLVGANVSWAARVSRLGRLFKGE
CCCCCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
FADWTDLNLAGLAVNRDLLTPDAATCLDLFASGRQGSLFQRLRTLLVSGVYRQTLAGTLG
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LYLAFVLGRI
HHHHHHHHCC
>Mature Secondary Structure
MDRADLRIAVLMGTKDGAPFIDEQLQSLLAQSHPLIDLWISDDGSVDGTVPIIEAWKSRW
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCC
TKGRVTLVQGPREGFAANFRSMILDRRIDADFYAFSDQDDVWEPDRLESAVQWMQAFGAE
CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC
PPLMFCSRTATMTETGSLAGHSPLFRRPPSFRNALVQSIAGGNTILLNRAARDLLARASA
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
RTGFVSHDWWAYLVVTGAGGVVHYDPRPLVRYRQHAANLVGANVSWAARVSRLGRLFKGE
CCCCCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
FADWTDLNLAGLAVNRDLLTPDAATCLDLFASGRQGSLFQRLRTLLVSGVYRQTLAGTLG
CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LYLAFVLGRI
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA