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The map label for this gene is 13476233

Identifier: 13476233

GI number: 13476233

Start: 6191666

End: 6192421

Strand: Direct

Name: 13476233

Synonym: mlr7500

Alternate gene names: NA

Gene position: 6191666-6192421 (Clockwise)

Preceding gene: 13476232

Following gene: 13476234

Centisome position: 88.0

GC content: 63.49

Gene sequence:

>756_bases
ATGAGCGAGGCATCCATCAGGAGTGCCGGCCGTTCGCGGCCACGATCGGCATTGCTGCTCGGCCTTGGCCTGGTGCTGCT
TTTGATCCTGCTGGTGCTCGGCACCTGGCAGGTCCAGCGCCTGCACTGGAAGGAAGGTCTCCTGCAGACCATCGACCAGC
GCACGCATTCGGCGCCGCTGCCGCTGGCCGAAGTCGAGAAGGAATTCGCCTCGACCGGTGACGTCGACTACACGCCGGTC
ACGGTCTCCGGCACGTTCCTGCATTCGGGCGAACGGCATTTCTACGCGACCTGGGAAGGTGACGCGGGCTTCAACGTCTA
CACGCCGCTTGCCCTCGACGACGGCCGCTTCGTGCTGATCAATCGTGGTTTCATACCCTATGATCTGAAAGACCCGGCCA
AGCGCGCCGAGGGGCAGATCCAAGGCAAGGTGACGATCACCGGGCTTGCCCGCAATCCGCTGCCGGCAAAGCCGTCGATG
ATGCTTCCCGACAATGACGTGGCGAAGAACATCTTCTACTGGAAGGACCGCGACGCCATGGCGGCGAGCGCCGGCCTGCC
GGCCGGGTTCACGCTGGTGCCGATCTTCATCGATGCCGATAAGACGCTCAATCCCGGCGGTTTGCCGATCGGCGGCGTCA
CCATCATCGACCTCCCGAACAGCCATCTGCAGTATGCGATGACCTGGTATGGGCTTGCAGCAGCACTCGCCGCCGTGCTC
ATCCTGCGGCTTCGCCGTCCCGCGAAAGAGGAATGA

Upstream 100 bases:

>100_bases
CCCTGGTCCTGTGCCTGACGGCGCTGCGGCTGATCAAGGGCGTGCTGCTCACTCTCCAATATGCCAACAAGGCGGCCGAA
GGCCGGCTGGACCACGGCGA

Downstream 100 bases:

>100_bases
ACGCAAGCAGCGCCCCCCTTTCTACCGACACCCTTGACAGGGCCTGCTCTTGACAGAACGGGGGTAGGCACCTCATTTCG
GCGCTGACGAACCGGCCAGG

Product: SURF-1 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSEASIRSAGRSRPRSALLLGLGLVLLLILLVLGTWQVQRLHWKEGLLQTIDQRTHSAPLPLAEVEKEFASTGDVDYTPV
TVSGTFLHSGERHFYATWEGDAGFNVYTPLALDDGRFVLINRGFIPYDLKDPAKRAEGQIQGKVTITGLARNPLPAKPSM
MLPDNDVAKNIFYWKDRDAMAASAGLPAGFTLVPIFIDADKTLNPGGLPIGGVTIIDLPNSHLQYAMTWYGLAAALAAVL
ILRLRRPAKEE

Sequences:

>Translated_251_residues
MSEASIRSAGRSRPRSALLLGLGLVLLLILLVLGTWQVQRLHWKEGLLQTIDQRTHSAPLPLAEVEKEFASTGDVDYTPV
TVSGTFLHSGERHFYATWEGDAGFNVYTPLALDDGRFVLINRGFIPYDLKDPAKRAEGQIQGKVTITGLARNPLPAKPSM
MLPDNDVAKNIFYWKDRDAMAASAGLPAGFTLVPIFIDADKTLNPGGLPIGGVTIIDLPNSHLQYAMTWYGLAAALAAVL
ILRLRRPAKEE
>Mature_250_residues
SEASIRSAGRSRPRSALLLGLGLVLLLILLVLGTWQVQRLHWKEGLLQTIDQRTHSAPLPLAEVEKEFASTGDVDYTPVT
VSGTFLHSGERHFYATWEGDAGFNVYTPLALDDGRFVLINRGFIPYDLKDPAKRAEGQIQGKVTITGLARNPLPAKPSMM
LPDNDVAKNIFYWKDRDAMAASAGLPAGFTLVPIFIDADKTLNPGGLPIGGVTIIDLPNSHLQYAMTWYGLAAALAAVLI
LRLRRPAKEE

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

Organism=Homo sapiens, GI4507319, Length=246, Percent_Identity=36.9918699186992, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17553856, Length=252, Percent_Identity=29.7619047619048, Blast_Score=93, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6321550, Length=178, Percent_Identity=30.3370786516854, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17864366, Length=240, Percent_Identity=30.4166666666667, Blast_Score=98, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 27415; Mature: 27284

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEASIRSAGRSRPRSALLLGLGLVLLLILLVLGTWQVQRLHWKEGLLQTIDQRTHSAPL
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
PLAEVEKEFASTGDVDYTPVTVSGTFLHSGERHFYATWEGDAGFNVYTPLALDDGRFVLI
CHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCEEEEEEEECCCCEEEE
NRGFIPYDLKDPAKRAEGQIQGKVTITGLARNPLPAKPSMMLPDNDVAKNIFYWKDRDAM
ECCCCCCCCCCHHHHCCCEEEEEEEEEEEECCCCCCCCCEECCCCHHHCCEEEEECCCCH
AASAGLPAGFTLVPIFIDADKTLNPGGLPIGGVTIIDLPNSHLQYAMTWYGLAAALAAVL
HHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
ILRLRRPAKEE
HHHHCCCCCCC
>Mature Secondary Structure 
SEASIRSAGRSRPRSALLLGLGLVLLLILLVLGTWQVQRLHWKEGLLQTIDQRTHSAPL
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
PLAEVEKEFASTGDVDYTPVTVSGTFLHSGERHFYATWEGDAGFNVYTPLALDDGRFVLI
CHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCEEEEEEEECCCCEEEE
NRGFIPYDLKDPAKRAEGQIQGKVTITGLARNPLPAKPSMMLPDNDVAKNIFYWKDRDAM
ECCCCCCCCCCHHHHCCCEEEEEEEEEEEECCCCCCCCCEECCCCHHHCCEEEEECCCCH
AASAGLPAGFTLVPIFIDADKTLNPGGLPIGGVTIIDLPNSHLQYAMTWYGLAAALAAVL
HHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
ILRLRRPAKEE
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA