Click here to switch to the map view.

The map label for this gene is glcD [H]

Identifier: 13476187

GI number: 13476187

Start: 6148831

End: 6150261

Strand: Direct

Name: glcD [H]

Synonym: mlr7440

Alternate gene names: 13476187

Gene position: 6148831-6150261 (Clockwise)

Preceding gene: 13476186

Following gene: 13476188

Centisome position: 87.39

GC content: 63.52

Gene sequence:

>1431_bases
ATGACCGAAATTTTGCAAAAACTCGATCCCGCTCTCATCGACCGCTTCGCGGCGATCGTCGGTGACAAATACGCGCTGCG
CGATGAGCAGGACATCGCGCCCTATCTCATCGAGCGGCGCGGGCTCTGGCATGGCGCAACATCGCTGGTGCTGCGGCCGG
GCAGTGTCGACGAGGTCAGCCGCATCATGCGGCTGGCGACCGAGACGGGAACGCCCATCGTGCCGCAAAGCGGCAACACC
GGGCTGGTCGGTGCCCAGGTGCCCGACAAATCCGGCCGCGAGATCATCCTTTCGCTGTCGCGGCTGAACCGCATCCGCGA
GATCGACATCCTGTCCAACACCGTGACGGCGGAGGCTGGCGTCATCCTGCAGACGCTGCAGGAGGCGGCCGACGCCGCCG
ACCGGCTGTTTCCGCTGTCGCTGGCAGCCCAGGGCTCCTGCCAGATCGGCGGCAATCTTTCTTCCAACGCCGGCGGCACC
GGTGTGCTGGCCTACGGCAATGCGCGTGAACTCTGTCTCGGCGTCGAGGTGGTACTGCCGACGGGCGAGGTCTTCGACGA
TCTGCGCAAATTGAAGAAGGACAACACCGGCTACGATCTGAAGGACCTGTTCGTCGGCGCCGAAGGCACGCTGGGAATCA
TCACCGCCGCTGTGCTGAAGCTGTTCCCGAACCCGAAGGGGCGTGAGGTCGCATTCGCCGGCCTGTCGTCGCCCGAGGCG
GCGCTATCTTTGTTCAGCCTGGCGATGGACCGCGCCGGCGCTTCGCTCACGGCCTTCGAACTGATCGGCAAGAGACCTTA
CGATTTCACGCTCAAGCATGGTCAAGGTGTCGTGCGGCCGCTGGCCGATGATTGGCCCTGGTATGTCTTGATGCAGATTT
CTTCCGGCCGCTCGGAAGCCGATGGACGGGCGCTGATAGAAGAGGTGCTGGCGGATGGTCTCCAGCAAGGCATCGTTGGC
GATGCGGTGGTCGCGGCAAGCCTCGCCCAGGGCGACGCTTTCTGGAACTTCCGCGAGACGCTACCCGAATGCCAGAAGCC
GGAGGGCGCCTCGATCAAGCACGATATTTCGGTGCCGATCGCCTCAATCCCACGCTTCATCGCAGAGGCCGCAGGCGCGG
TGGCGTCAGTCAGTGCCGGCGCCCGCGTGGTCTGCTTCGGCCATATGGGGGATGGCAATCTTCATTATAACATCTCGCGG
CCCATCGATGGCGACGATGAGGCCTTTCTCGCCCTCTACCATCCCATGAACAAAGCCGTGCACGATGTCGTGCGCTCCTT
CCACGGTTCGATCTCGGCCGAGCACGGCATCGGCCAGTTGAAGCGCGACGAACTGATCGCCACGGCGCCGCCGATGGCCA
TTGATCTGATGCGCCGAGTGAAGGCTGCCTTCGATCCGGCCGGCATCATGAATCCCGGTAAGGTTATCTGA

Upstream 100 bases:

>100_bases
GACGATCCCCTTCGATGGGCTCGGCGAGGCCATCAACGACCGGCTCGCTCGCGCGGCCGCCCCTCGTGACAATGCACAGC
CCACAACATAGTTTTCCCGC

Downstream 100 bases:

>100_bases
TCCTTTCAACATCTTGTGGTCGGTGGCATTCCGATAACCATCCCTGAGATCAGCAAAATTTAACCGACTTTCTTAAGCGC
GGCGGTAAGGAGCCCGCGCT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MTEILQKLDPALIDRFAAIVGDKYALRDEQDIAPYLIERRGLWHGATSLVLRPGSVDEVSRIMRLATETGTPIVPQSGNT
GLVGAQVPDKSGREIILSLSRLNRIREIDILSNTVTAEAGVILQTLQEAADAADRLFPLSLAAQGSCQIGGNLSSNAGGT
GVLAYGNARELCLGVEVVLPTGEVFDDLRKLKKDNTGYDLKDLFVGAEGTLGIITAAVLKLFPNPKGREVAFAGLSSPEA
ALSLFSLAMDRAGASLTAFELIGKRPYDFTLKHGQGVVRPLADDWPWYVLMQISSGRSEADGRALIEEVLADGLQQGIVG
DAVVAASLAQGDAFWNFRETLPECQKPEGASIKHDISVPIASIPRFIAEAAGAVASVSAGARVVCFGHMGDGNLHYNISR
PIDGDDEAFLALYHPMNKAVHDVVRSFHGSISAEHGIGQLKRDELIATAPPMAIDLMRRVKAAFDPAGIMNPGKVI

Sequences:

>Translated_476_residues
MTEILQKLDPALIDRFAAIVGDKYALRDEQDIAPYLIERRGLWHGATSLVLRPGSVDEVSRIMRLATETGTPIVPQSGNT
GLVGAQVPDKSGREIILSLSRLNRIREIDILSNTVTAEAGVILQTLQEAADAADRLFPLSLAAQGSCQIGGNLSSNAGGT
GVLAYGNARELCLGVEVVLPTGEVFDDLRKLKKDNTGYDLKDLFVGAEGTLGIITAAVLKLFPNPKGREVAFAGLSSPEA
ALSLFSLAMDRAGASLTAFELIGKRPYDFTLKHGQGVVRPLADDWPWYVLMQISSGRSEADGRALIEEVLADGLQQGIVG
DAVVAASLAQGDAFWNFRETLPECQKPEGASIKHDISVPIASIPRFIAEAAGAVASVSAGARVVCFGHMGDGNLHYNISR
PIDGDDEAFLALYHPMNKAVHDVVRSFHGSISAEHGIGQLKRDELIATAPPMAIDLMRRVKAAFDPAGIMNPGKVI
>Mature_475_residues
TEILQKLDPALIDRFAAIVGDKYALRDEQDIAPYLIERRGLWHGATSLVLRPGSVDEVSRIMRLATETGTPIVPQSGNTG
LVGAQVPDKSGREIILSLSRLNRIREIDILSNTVTAEAGVILQTLQEAADAADRLFPLSLAAQGSCQIGGNLSSNAGGTG
VLAYGNARELCLGVEVVLPTGEVFDDLRKLKKDNTGYDLKDLFVGAEGTLGIITAAVLKLFPNPKGREVAFAGLSSPEAA
LSLFSLAMDRAGASLTAFELIGKRPYDFTLKHGQGVVRPLADDWPWYVLMQISSGRSEADGRALIEEVLADGLQQGIVGD
AVVAASLAQGDAFWNFRETLPECQKPEGASIKHDISVPIASIPRFIAEAAGAVASVSAGARVVCFGHMGDGNLHYNISRP
IDGDDEAFLALYHPMNKAVHDVVRSFHGSISAEHGIGQLKRDELIATAPPMAIDLMRRVKAAFDPAGIMNPGKVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=475, Percent_Identity=36.8421052631579, Blast_Score=273, Evalue=2e-73,
Organism=Homo sapiens, GI37595756, Length=438, Percent_Identity=28.5388127853881, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI37595754, Length=465, Percent_Identity=27.0967741935484, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI4501993, Length=209, Percent_Identity=30.1435406698565, Blast_Score=83, Evalue=6e-16,
Organism=Escherichia coli, GI1789351, Length=482, Percent_Identity=26.9709543568465, Blast_Score=131, Evalue=9e-32,
Organism=Escherichia coli, GI1787977, Length=499, Percent_Identity=26.0521042084168, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI48994907, Length=222, Percent_Identity=27.4774774774775, Blast_Score=73, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17534361, Length=466, Percent_Identity=32.8326180257511, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI71992373, Length=454, Percent_Identity=26.431718061674, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71992381, Length=454, Percent_Identity=25.5506607929515, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI71992392, Length=373, Percent_Identity=26.5415549597855, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17556096, Length=207, Percent_Identity=25.1207729468599, Blast_Score=76, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6320023, Length=484, Percent_Identity=35.3305785123967, Blast_Score=306, Evalue=5e-84,
Organism=Saccharomyces cerevisiae, GI6320764, Length=479, Percent_Identity=33.6116910229645, Blast_Score=277, Evalue=3e-75,
Organism=Saccharomyces cerevisiae, GI6320027, Length=438, Percent_Identity=28.9954337899543, Blast_Score=164, Evalue=4e-41,
Organism=Drosophila melanogaster, GI18921117, Length=468, Percent_Identity=36.7521367521368, Blast_Score=290, Evalue=2e-78,
Organism=Drosophila melanogaster, GI24639277, Length=468, Percent_Identity=36.7521367521368, Blast_Score=290, Evalue=2e-78,
Organism=Drosophila melanogaster, GI24639275, Length=468, Percent_Identity=36.7521367521368, Blast_Score=290, Evalue=2e-78,
Organism=Drosophila melanogaster, GI24653753, Length=475, Percent_Identity=23.7894736842105, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50692; Mature: 50560

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEILQKLDPALIDRFAAIVGDKYALRDEQDIAPYLIERRGLWHGATSLVLRPGSVDEVS
CHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCHHHHH
RIMRLATETGTPIVPQSGNTGLVGAQVPDKSGREIILSLSRLNRIREIDILSNTVTAEAG
HHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VILQTLQEAADAADRLFPLSLAAQGSCQIGGNLSSNAGGTGVLAYGNARELCLGVEVVLP
HHHHHHHHHHHHHHHEEEEEECCCCCEEECCCCCCCCCCCEEEEECCCCEEEEEEEEEEC
TGEVFDDLRKLKKDNTGYDLKDLFVGAEGTLGIITAAVLKLFPNPKGREVAFAGLSSPEA
CHHHHHHHHHHHCCCCCCCHHHHEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
ALSLFSLAMDRAGASLTAFELIGKRPYDFTLKHGQGVVRPLADDWPWYVLMQISSGRSEA
HHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCC
DGRALIEEVLADGLQQGIVGDAVVAASLAQGDAFWNFRETLPECQKPEGASIKHDISVPI
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHCHHHCCCCCCCCCEECCCCH
ASIPRFIAEAAGAVASVSAGARVVCFGHMGDGNLHYNISRPIDGDDEAFLALYHPMNKAV
HHHHHHHHHHHCHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEHHHHHHHH
HDVVRSFHGSISAEHGIGQLKRDELIATAPPMAIDLMRRVKAAFDPAGIMNPGKVI
HHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TEILQKLDPALIDRFAAIVGDKYALRDEQDIAPYLIERRGLWHGATSLVLRPGSVDEVS
HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCHHHHH
RIMRLATETGTPIVPQSGNTGLVGAQVPDKSGREIILSLSRLNRIREIDILSNTVTAEAG
HHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VILQTLQEAADAADRLFPLSLAAQGSCQIGGNLSSNAGGTGVLAYGNARELCLGVEVVLP
HHHHHHHHHHHHHHHEEEEEECCCCCEEECCCCCCCCCCCEEEEECCCCEEEEEEEEEEC
TGEVFDDLRKLKKDNTGYDLKDLFVGAEGTLGIITAAVLKLFPNPKGREVAFAGLSSPEA
CHHHHHHHHHHHCCCCCCCHHHHEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
ALSLFSLAMDRAGASLTAFELIGKRPYDFTLKHGQGVVRPLADDWPWYVLMQISSGRSEA
HHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCC
DGRALIEEVLADGLQQGIVGDAVVAASLAQGDAFWNFRETLPECQKPEGASIKHDISVPI
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHCHHHCCCCCCCCCEECCCCH
ASIPRFIAEAAGAVASVSAGARVVCFGHMGDGNLHYNISRPIDGDDEAFLALYHPMNKAV
HHHHHHHHHHHCHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEHHHHHHHH
HDVVRSFHGSISAEHGIGQLKRDELIATAPPMAIDLMRRVKAAFDPAGIMNPGKVI
HHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]