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The map label for this gene is atpF1

Identifier: 13476165

GI number: 13476165

Start: 6127754

End: 6128335

Strand: Direct

Name: atpF1

Synonym: mlr7413

Alternate gene names: 13476165

Gene position: 6127754-6128335 (Clockwise)

Preceding gene: 13476164

Following gene: 13476166

Centisome position: 87.09

GC content: 64.6

Gene sequence:

>582_bases
ATGTTCGTGACATCTGCCTTTGCGGAAGAGACCGCGCCCGCCGTGACGGGAGGCGACACGCATTCCGGCACAGGCGTGCC
TGCCGAAGCGCACGGCACGTTCCCGCCATTCGATCCTGCGACATTTCCGTCGCAGCTTCTGTGGCTGGCGATCACCTTTG
GGCTGTTCTACCTCTTCTTGAAGAAGGTAGCGATGCCGCGCATTGGCGGCATCATCGATGTCCGCAACGATCGCATCAGC
CAGGACCTCGATCAGGCGAGCAAGCTGAAGGGCGAGGCCGACGCCGCTGTTGCCGCTTACGAGCAGGAACTGGCGGAAGC
CAAGAAGAACGCCAGTTCGATCGGCCAGCAGGCCGCCGATGCGGCCAAGGCGGAAGCCGAGACCGCACGCAAGAAGATCG
AGGCCGCGCTCGACGAGAAGCTTGGCGAGGCCGAGGCGCGCATTTCCTCCATCAAGGCCAACGCCATGAAGGAAGTCGGC
AGCATCGCCGAGGACACCGCTTCGGCGATCGTCGAGGCCCTGGTCGGCGGCAAGGCCAGCAAGGCCGAGATCGCGGCCGC
GGTCAAATCCGTGGCCCGGTGA

Upstream 100 bases:

>100_bases
TCTCGCTCCTGATCGCGCTCCTCCTGGTGTTCAAGTAAGAAACACAGGCTGACGAAGGGGGGCGCATGGTGCGACCTTAC
CTTATGGACAGGGGAATGAG

Downstream 100 bases:

>100_bases
GGAGCGCATCATGGACGCTACATCTCTCGCAACGCTTTGGGCCACGATTGCCCTGATCATCTTCCTGGGCGTCGCCATCT
ACATCAAGGTGCCTGGGCTG

Product: F0F1 ATP synthase subunit B'

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b 1; ATPase subunit I 1; F-type ATPase subunit b 1; F-ATPase subunit b 1

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MFVTSAFAEETAPAVTGGDTHSGTGVPAEAHGTFPPFDPATFPSQLLWLAITFGLFYLFLKKVAMPRIGGIIDVRNDRIS
QDLDQASKLKGEADAAVAAYEQELAEAKKNASSIGQQAADAAKAEAETARKKIEAALDEKLGEAEARISSIKANAMKEVG
SIAEDTASAIVEALVGGKASKAEIAAAVKSVAR

Sequences:

>Translated_193_residues
MFVTSAFAEETAPAVTGGDTHSGTGVPAEAHGTFPPFDPATFPSQLLWLAITFGLFYLFLKKVAMPRIGGIIDVRNDRIS
QDLDQASKLKGEADAAVAAYEQELAEAKKNASSIGQQAADAAKAEAETARKKIEAALDEKLGEAEARISSIKANAMKEVG
SIAEDTASAIVEALVGGKASKAEIAAAVKSVAR
>Mature_193_residues
MFVTSAFAEETAPAVTGGDTHSGTGVPAEAHGTFPPFDPATFPSQLLWLAITFGLFYLFLKKVAMPRIGGIIDVRNDRIS
QDLDQASKLKGEADAAVAAYEQELAEAKKNASSIGQQAADAAKAEAETARKKIEAALDEKLGEAEARISSIKANAMKEVG
SIAEDTASAIVEALVGGKASKAEIAAAVKSVAR

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF1_RHILO (Q986D2)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_107735.1
- GeneID:   1230390
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr7413
- NMPDR:   fig|266835.1.peg.5836
- HOGENOM:   HBG656755
- OMA:   GEVHTET
- ProtClustDB:   PRK09174
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 20035; Mature: 20035

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17d62964)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVTSAFAEETAPAVTGGDTHSGTGVPAEAHGTFPPFDPATFPSQLLWLAITFGLFYLFL
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KKVAMPRIGGIIDVRNDRISQDLDQASKLKGEADAAVAAYEQELAEAKKNASSIGQQAAD
HHHHHHHHCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAKAEAETARKKIEAALDEKLGEAEARISSIKANAMKEVGSIAEDTASAIVEALVGGKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KAEIAAAVKSVAR
HHHHHHHHHHHCH
>Mature Secondary Structure
MFVTSAFAEETAPAVTGGDTHSGTGVPAEAHGTFPPFDPATFPSQLLWLAITFGLFYLFL
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
KKVAMPRIGGIIDVRNDRISQDLDQASKLKGEADAAVAAYEQELAEAKKNASSIGQQAAD
HHHHHHHHCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAKAEAETARKKIEAALDEKLGEAEARISSIKANAMKEVGSIAEDTASAIVEALVGGKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KAEIAAAVKSVAR
HHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968