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The map label for this gene is dppC [H]

Identifier: 13476036

GI number: 13476036

Start: 5984790

End: 5985632

Strand: Reverse

Name: dppC [H]

Synonym: mll7245

Alternate gene names: 13476036

Gene position: 5985632-5984790 (Counterclockwise)

Preceding gene: 13476037

Following gene: 13476035

Centisome position: 85.07

GC content: 67.14

Gene sequence:

>843_bases
GTGATGCGCATCCTGCGCGCCATCTTCGGCCATGGCAGCGGCCGCGTCGGCGGCGTCATCGTCGGCGTCTATTTGCTGGT
CGCCATCCTCGGCCTGTTCGGGCTGACGCCGCACAATCCGATCATGCAGTTCCGCGTCGACCGGCTGCACGCACCCAATG
GCGCCTACTGGATGGGCACTGACCTGTTCGGGCGCGACGTGGCCAGCCGGCTGATGGCCGGCATCGGCCAATCCTTCACG
GTCGCCTTCTTCTCGGTGGCCTTCGCGACCCTCGCCGGCACCGTGCTCGGGCTGGCGGCCGCCTGGCTCGGACGCCGCTG
GGACGGCTTGGTGATGCGCATCATGGACGTGCTGCTGGCTTTTCCGGCGATCCTTCTGGCATTGCTCATCGTCACCGTCG
CCGGGCCGGGCACATGGACCAGTGTCGTCGCCATCGGCATCGTCTACACGCCGATCTTCACGCGCGTGGTGCGCGGCCCT
GCCCTGTCGCTGAAGGCCCGCGAATTTGTCGACGCCGCGCGCACCTTCGGCAGCAGCTCGAGCTATATCGTCACCCGCCA
TCTGCTGCTCAATCTGGTGGCGCCGCTGACCGTGCAGGTGACGCTGGCGCTGGCCTGGGCGCTGCTGACGGAAGCCGGCT
TGAGCTTCCTCGGGCTGGGCACGCAGCCGCCCGCCGCCTCGCTCGGCCTGATGCTGAGCGACAGCCGCAATCTGATGGAG
ACCGCGCCCTGGCTGATGATTTTTCCGGGCCTGACCATCATGATCAGTATCCTCGGCTTCAACCTGCTGGGTGATGCCTT
GCGCGATATTCTCGACCCCAGGATGCGGAGGGCGCCGGCATGA

Upstream 100 bases:

>100_bases
AGGGAGCCGTGCTGTTCGTCGCCTTCAATTTCATGATCGTCAATCTCTTGGTCGACCTCGCCTATGTCGCGCTCGATCCG
CGTATCCGGCTGGGAGAGCA

Downstream 100 bases:

>100_bases
CGTTGCTGTCCGTTCGCGATCTGTGCGTCGGCTTCGGCCGCGATCCGCACGCCAATGAGGTGGTGCGCGGCGTCAGTTTC
GACCTTGCCGATGGCGAAAC

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MMRILRAIFGHGSGRVGGVIVGVYLLVAILGLFGLTPHNPIMQFRVDRLHAPNGAYWMGTDLFGRDVASRLMAGIGQSFT
VAFFSVAFATLAGTVLGLAAAWLGRRWDGLVMRIMDVLLAFPAILLALLIVTVAGPGTWTSVVAIGIVYTPIFTRVVRGP
ALSLKAREFVDAARTFGSSSSYIVTRHLLLNLVAPLTVQVTLALAWALLTEAGLSFLGLGTQPPAASLGLMLSDSRNLME
TAPWLMIFPGLTIMISILGFNLLGDALRDILDPRMRRAPA

Sequences:

>Translated_280_residues
MMRILRAIFGHGSGRVGGVIVGVYLLVAILGLFGLTPHNPIMQFRVDRLHAPNGAYWMGTDLFGRDVASRLMAGIGQSFT
VAFFSVAFATLAGTVLGLAAAWLGRRWDGLVMRIMDVLLAFPAILLALLIVTVAGPGTWTSVVAIGIVYTPIFTRVVRGP
ALSLKAREFVDAARTFGSSSSYIVTRHLLLNLVAPLTVQVTLALAWALLTEAGLSFLGLGTQPPAASLGLMLSDSRNLME
TAPWLMIFPGLTIMISILGFNLLGDALRDILDPRMRRAPA
>Mature_280_residues
MMRILRAIFGHGSGRVGGVIVGVYLLVAILGLFGLTPHNPIMQFRVDRLHAPNGAYWMGTDLFGRDVASRLMAGIGQSFT
VAFFSVAFATLAGTVLGLAAAWLGRRWDGLVMRIMDVLLAFPAILLALLIVTVAGPGTWTSVVAIGIVYTPIFTRVVRGP
ALSLKAREFVDAARTFGSSSSYIVTRHLLLNLVAPLTVQVTLALAWALLTEAGLSFLGLGTQPPAASLGLMLSDSRNLME
TAPWLMIFPGLTIMISILGFNLLGDALRDILDPRMRRAPA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=255, Percent_Identity=40, Blast_Score=188, Evalue=3e-49,
Organism=Escherichia coli, GI1787760, Length=256, Percent_Identity=39.0625, Blast_Score=185, Evalue=2e-48,
Organism=Escherichia coli, GI1789889, Length=239, Percent_Identity=37.6569037656904, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1789964, Length=250, Percent_Identity=39.6, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1787498, Length=228, Percent_Identity=39.9122807017544, Blast_Score=147, Evalue=9e-37,
Organism=Escherichia coli, GI1787549, Length=260, Percent_Identity=36.9230769230769, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=30.8370044052863, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29986; Mature: 29986

Theoretical pI: Translated: 11.60; Mature: 11.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRILRAIFGHGSGRVGGVIVGVYLLVAILGLFGLTPHNPIMQFRVDRLHAPNGAYWMGT
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEECC
DLFGRDVASRLMAGIGQSFTVAFFSVAFATLAGTVLGLAAAWLGRRWDGLVMRIMDVLLA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FPAILLALLIVTVAGPGTWTSVVAIGIVYTPIFTRVVRGPALSLKAREFVDAARTFGSSS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
SYIVTRHLLLNLVAPLTVQVTLALAWALLTEAGLSFLGLGTQPPAASLGLMLSDSRNLME
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHCCCCCHHHH
TAPWLMIFPGLTIMISILGFNLLGDALRDILDPRMRRAPA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
>Mature Secondary Structure
MMRILRAIFGHGSGRVGGVIVGVYLLVAILGLFGLTPHNPIMQFRVDRLHAPNGAYWMGT
CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEECC
DLFGRDVASRLMAGIGQSFTVAFFSVAFATLAGTVLGLAAAWLGRRWDGLVMRIMDVLLA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FPAILLALLIVTVAGPGTWTSVVAIGIVYTPIFTRVVRGPALSLKAREFVDAARTFGSSS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
SYIVTRHLLLNLVAPLTVQVTLALAWALLTEAGLSFLGLGTQPPAASLGLMLSDSRNLME
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHCCCCCHHHH
TAPWLMIFPGLTIMISILGFNLLGDALRDILDPRMRRAPA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]