BacMap

Definition	Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession	NC_002678
Length	7,036,071

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The map label for this gene is fabG [H]

Identifier: 13475991

GI number: 13475991

Start: 5938509

End: 5939285

Strand: Reverse

Name: fabG [H]

Synonym: mll7191

Alternate gene names: 13475991

Gene position: 5939285-5938509 (Counterclockwise)

Preceding gene: 13475992

Following gene: 13475990

Centisome position: 84.41

GC content: 65.12

Gene sequence:

>777_bases
ATGACGGATGAAATCGGCTACGCCATCTACCCAAGCCTCAAGGGCCGCAGCGTCTTCATAACCGGCGGCGGCAGCGGCAT
CGGCGAAAGCCTGGTGCGCCATTTTTGCGCGCAAGGCAGCCGCGTCGCCTTCGTCGATCTGTCGGAAGAGCCTTCCAGGC
ATCTGGTCGAGGCGATCGCGGCCGAAGGACACCCAGCGCCGCTGTTTATTCCGTGCGATCTGCGCGATGTCGAGCAGTTG
CAGGCGGCAACCGCGCAAGCGATGCAGCACAATGGCCCGATCCAGGTGCTGTGCAACAATGCCGGCAACGATGACCGCCA
TCAAACCAAGGACGTGACGGTCGCCTACTGGGACGACCGCATGGCGGTCAATCTGCGCCACCAGTTCTTCGCCGCGCAGG
CGGTGCGACCGCAGATGAGCGCGCAGGGTGGTGGCTCGATCATCAATTTCGGCTCCATCACCTGGATGGTCGGCGATCCC
GATTGTCCGGCCTATGTCACCGCGAAGGCCGCTGTCTACGGCATGACGCGGGCGCTGGCCCGCGAACTTGGCCCCGAGCG
CATCCGAGTCAACTGCATGGTGCCGGGCTGGGTGATGACCGAGCGCCAGATGCGGCTGTGGCTCAATCCGGCTGGTGAAC
GCCAGATCGCGGAAAGGCAGTGCCTGCCCGACCGGCTGCAGCCCGCCGACATCGCGCGCATGGCGCTGTTCCTCGCCGCC
GACGACAGCCGCATGTGCACGAGCCAGCAGTTCATCGTCGATGCGGGCTGGGTGTGA

Upstream 100 bases:

>100_bases
TCGAGCGCGTGCTGCAGGCCGACAAGGGCTGCGATTTCGACTTTCTCGTCGGCCGGCGCGATGCCGGCATCCCCCGGCAT
TCCCATTAGAGAGGCGCGCG

Downstream 100 bases:

>100_bases
CCCATACGGCTCCAAGGGAAGAAGGGTATTTCATGCGTCTCGTTCAGTACAGAATGCCGGATGGCAGCAGGCGGGTCGGC
CGCGTCTCCGACGACGACAA

Product: putative oxidoreductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTDEIGYAIYPSLKGRSVFITGGGSGIGESLVRHFCAQGSRVAFVDLSEEPSRHLVEAIAAEGHPAPLFIPCDLRDVEQL
QAATAQAMQHNGPIQVLCNNAGNDDRHQTKDVTVAYWDDRMAVNLRHQFFAAQAVRPQMSAQGGGSIINFGSITWMVGDP
DCPAYVTAKAAVYGMTRALARELGPERIRVNCMVPGWVMTERQMRLWLNPAGERQIAERQCLPDRLQPADIARMALFLAA
DDSRMCTSQQFIVDAGWV

Sequences:

>Translated_258_residues
MTDEIGYAIYPSLKGRSVFITGGGSGIGESLVRHFCAQGSRVAFVDLSEEPSRHLVEAIAAEGHPAPLFIPCDLRDVEQL
QAATAQAMQHNGPIQVLCNNAGNDDRHQTKDVTVAYWDDRMAVNLRHQFFAAQAVRPQMSAQGGGSIINFGSITWMVGDP
DCPAYVTAKAAVYGMTRALARELGPERIRVNCMVPGWVMTERQMRLWLNPAGERQIAERQCLPDRLQPADIARMALFLAA
DDSRMCTSQQFIVDAGWV
>Mature_257_residues
TDEIGYAIYPSLKGRSVFITGGGSGIGESLVRHFCAQGSRVAFVDLSEEPSRHLVEAIAAEGHPAPLFIPCDLRDVEQLQ
AATAQAMQHNGPIQVLCNNAGNDDRHQTKDVTVAYWDDRMAVNLRHQFFAAQAVRPQMSAQGGGSIINFGSITWMVGDPD
CPAYVTAKAAVYGMTRALARELGPERIRVNCMVPGWVMTERQMRLWLNPAGERQIAERQCLPDRLQPADIARMALFLAAD
DSRMCTSQQFIVDAGWV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=28.1632653061224, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI7705925, Length=246, Percent_Identity=31.3008130081301, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=24.8, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI59889578, Length=230, Percent_Identity=29.1304347826087, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=28.957528957529, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI66933014, Length=250, Percent_Identity=29.2, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=24.7011952191235, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI40254992, Length=245, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI31542939, Length=195, Percent_Identity=29.7435897435897, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=26.8292682926829, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=28.021978021978, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=28.9473684210526, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI10190704, Length=257, Percent_Identity=29.1828793774319, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI224922801, Length=173, Percent_Identity=28.3236994219653, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI4758504, Length=203, Percent_Identity=31.5270935960591, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI302344755, Length=109, Percent_Identity=34.8623853211009, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI210032110, Length=210, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI20149619, Length=195, Percent_Identity=28.7179487179487, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI4503817, Length=188, Percent_Identity=26.063829787234, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=31.8725099601594, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=29.8387096774194, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=29.7959183673469, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=29.2682926829268, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI87082160, Length=263, Percent_Identity=26.9961977186312, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787335, Length=250, Percent_Identity=27.2, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788459, Length=244, Percent_Identity=29.0983606557377, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1789378, Length=240, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786812, Length=252, Percent_Identity=26.984126984127, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI2367365, Length=253, Percent_Identity=26.0869565217391, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787526, Length=252, Percent_Identity=29.7619047619048, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI2367175, Length=190, Percent_Identity=27.8947368421053, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789057, Length=251, Percent_Identity=25.0996015936255, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=259, Percent_Identity=30.5019305019305, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17561402, Length=248, Percent_Identity=27.0161290322581, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI115534694, Length=243, Percent_Identity=28.3950617283951, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=28.8537549407115, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17567345, Length=201, Percent_Identity=28.8557213930348, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17551412, Length=257, Percent_Identity=28.7937743190661, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=27.7566539923954, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=27.4131274131274, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=259, Percent_Identity=28.1853281853282, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=26.0377358490566, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=26.9230769230769, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=26.3358778625954, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=245, Percent_Identity=24.8979591836735, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=27.0992366412214, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17558006, Length=228, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=26.1538461538462, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=259, Percent_Identity=25.0965250965251, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17564282, Length=176, Percent_Identity=25, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=26.4367816091954, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=26.7175572519084, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=244, Percent_Identity=25, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=25.187969924812, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=198, Percent_Identity=22.7272727272727, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193203117, Length=202, Percent_Identity=22.7722772277228, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=28.4, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI28571526, Length=249, Percent_Identity=28.1124497991968, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=26.1044176706827, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=28, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24643142, Length=249, Percent_Identity=26.5060240963855, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI21358495, Length=195, Percent_Identity=27.6923076923077, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24644337, Length=249, Percent_Identity=28.9156626506024, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281364892, Length=187, Percent_Identity=31.5508021390374, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=23.6947791164659, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=24.5059288537549, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24581726, Length=208, Percent_Identity=25.4807692307692, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24640492, Length=226, Percent_Identity=26.5486725663717, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 28348; Mature: 28216

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEIGYAIYPSLKGRSVFITGGGSGIGESLVRHFCAQGSRVAFVDLSEEPSRHLVEAIA
CCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
AEGHPAPLFIPCDLRDVEQLQAATAQAMQHNGPIQVLCNNAGNDDRHQTKDVTVAYWDDR
CCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCE
MAVNLRHQFFAAQAVRPQMSAQGGGSIINFGSITWMVGDPDCPAYVTAKAAVYGMTRALA
EEEEHHHHHHHHHHCCCCCCCCCCCCEEEECEEEEEECCCCCCCEEEHHHHHHHHHHHHH
RELGPERIRVNCMVPGWVMTERQMRLWLNPAGERQIAERQCLPDRLQPADIARMALFLAA
HHCCCCEEEEEEEECCEEECCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHEEEEEEC
DDSRMCTSQQFIVDAGWV
CCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
TDEIGYAIYPSLKGRSVFITGGGSGIGESLVRHFCAQGSRVAFVDLSEEPSRHLVEAIA
CCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
AEGHPAPLFIPCDLRDVEQLQAATAQAMQHNGPIQVLCNNAGNDDRHQTKDVTVAYWDDR
CCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCE
MAVNLRHQFFAAQAVRPQMSAQGGGSIINFGSITWMVGDPDCPAYVTAKAAVYGMTRALA
EEEEHHHHHHHHHHCCCCCCCCCCCCEEEECEEEEEECCCCCCCEEEHHHHHHHHHHHHH
RELGPERIRVNCMVPGWVMTERQMRLWLNPAGERQIAERQCLPDRLQPADIARMALFLAA
HHCCCCEEEEEEEECCEEECCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHEEEEEEC
DDSRMCTSQQFIVDAGWV
CCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]