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The map label for this gene is yodQ [H]

Identifier: 13475969

GI number: 13475969

Start: 5918335

End: 5919636

Strand: Direct

Name: yodQ [H]

Synonym: mlr7167

Alternate gene names: 13475969

Gene position: 5918335-5919636 (Clockwise)

Preceding gene: 13475967

Following gene: 13475970

Centisome position: 84.11

GC content: 64.59

Gene sequence:

>1302_bases
ATGCCTGAGCGAATTGCCGACGAAGCCATTTTGCGCGCAGTCGATGACGGGTTCGCGCGGCAAGTCGCGTTCCTGGCGGA
CCTCGTGCGCTTTCCTTCCCAGCGCGGCGAGGAACACGCCGCGCAATCCTTCATGGCGGCCGCTTATGAGGCCGATGGCT
ACGCGGTCGACATGTGGCGCGTCGATGTCGACGCGATCCGTAACCTGCCTGGGTTTTCACCGGTTGCGGTCTCCTATGAC
GATGCCTTCAATGTCGTTGCCACCCACACGCCGAGAAACGCCACCGGCCGTTCTCTGATCCTCAACGGCCATATCGATGT
GGTGCCGACGGGGCCGCTCGACCGCTGGGTGCGCGACCCCTACGATCCGGCCATCGAAGACGGCTGGATGCATGGCCGCG
GCGCCGGCGACATGAAGGCCGGCCTGTCGGCCTGTCTCTACGCGCTCGCCGCCTTGCGCCGCCTCGGCTATCAGCCGGCC
GCGAATGTTTACCTCCAGTCGGTGGTCGAAGAGGAGTGCACCGGCAATGGCGCGCTGGCCTGCCTGCAACGCGGCTATCG
CGCCGACGCCGCCTTCATTCCCGAGCCCTTGGAACCGCGCTTGATGCGGGCGCAGGTCGGGCCGATCTGGTTCAGGGTCG
AGGTCGACGGCGATCCGCAGCACGCCTCCGGCGCTTTCTCGGCCGGGGCCAATGCCATCGAAAAGGCCTTTCTCATCATC
CAGGCGCTGAAACAGCTCGAAATCGTCTGGAATGCACGCAAGGTCGACGACAAGCATTTCTGCGATCACCCGCACCCGAT
CCGCTTCAACCTCGGCAAGATCGAAGGCGGTGAATGGACATCGAGCGTTCCGGCGCGCTGTGTCTTCGAGATGCGGGTCG
CCACCTATCCCGGGCAGAAGCTCGAGGATGCCAGGGCCGAGCTCGAAACCTGCATCGCCGATGCGGCCCGCGCCGACCCG
TTCCTTGCCAATCGCCCGCCCAAGATGAGCTATATCGATTTCATGGCCGAGGGCTATGTTTTGGAGGGTGCCGACGAGAT
GGAAGCCGTGCTGCGCCGCGGCCATACCGCCGTGTGGGGCGAGCCGCTGACGGAGCATGTCACCTCGGCGACCACGGATG
CGCGCTTCTTCGGCCTCTATGCCGACACACCGGCGATCGTCTATGGCCCGATCTGCCGCATGCCGCATGGCTATGACGAG
GCCGTCGATCTGGACTCGGTGCGCAAGGTCACCCAGACCATAGCGCTGTTCATCGCCGACTGGTGTGGTCTCGAGCCGAT
CGATCCGGAGATGAGCTCATGA

Upstream 100 bases:

>100_bases
TTCCCGGGTTGGGCCATCGTTTTGGCCCGACCTGTCTCCTTGCCTTTCCACGAAATGGCATATGAGATATGATACACCAT
TAACGAGAAAGCGGAATATG

Downstream 100 bases:

>100_bases
ATGCGGCTGTGCCTGACGCTTTTGGCGAAACGCTGGCCCAGGATGCGCCTGACGTTTCGATCGCCGATGCGCTTGCCATC
TTGCGCCGGCACTACGGCCT

Product: acetylornithine deacetylase

Products: acetate; L-ornithine

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MPERIADEAILRAVDDGFARQVAFLADLVRFPSQRGEEHAAQSFMAAAYEADGYAVDMWRVDVDAIRNLPGFSPVAVSYD
DAFNVVATHTPRNATGRSLILNGHIDVVPTGPLDRWVRDPYDPAIEDGWMHGRGAGDMKAGLSACLYALAALRRLGYQPA
ANVYLQSVVEEECTGNGALACLQRGYRADAAFIPEPLEPRLMRAQVGPIWFRVEVDGDPQHASGAFSAGANAIEKAFLII
QALKQLEIVWNARKVDDKHFCDHPHPIRFNLGKIEGGEWTSSVPARCVFEMRVATYPGQKLEDARAELETCIADAARADP
FLANRPPKMSYIDFMAEGYVLEGADEMEAVLRRGHTAVWGEPLTEHVTSATTDARFFGLYADTPAIVYGPICRMPHGYDE
AVDLDSVRKVTQTIALFIADWCGLEPIDPEMSS

Sequences:

>Translated_433_residues
MPERIADEAILRAVDDGFARQVAFLADLVRFPSQRGEEHAAQSFMAAAYEADGYAVDMWRVDVDAIRNLPGFSPVAVSYD
DAFNVVATHTPRNATGRSLILNGHIDVVPTGPLDRWVRDPYDPAIEDGWMHGRGAGDMKAGLSACLYALAALRRLGYQPA
ANVYLQSVVEEECTGNGALACLQRGYRADAAFIPEPLEPRLMRAQVGPIWFRVEVDGDPQHASGAFSAGANAIEKAFLII
QALKQLEIVWNARKVDDKHFCDHPHPIRFNLGKIEGGEWTSSVPARCVFEMRVATYPGQKLEDARAELETCIADAARADP
FLANRPPKMSYIDFMAEGYVLEGADEMEAVLRRGHTAVWGEPLTEHVTSATTDARFFGLYADTPAIVYGPICRMPHGYDE
AVDLDSVRKVTQTIALFIADWCGLEPIDPEMSS
>Mature_432_residues
PERIADEAILRAVDDGFARQVAFLADLVRFPSQRGEEHAAQSFMAAAYEADGYAVDMWRVDVDAIRNLPGFSPVAVSYDD
AFNVVATHTPRNATGRSLILNGHIDVVPTGPLDRWVRDPYDPAIEDGWMHGRGAGDMKAGLSACLYALAALRRLGYQPAA
NVYLQSVVEEECTGNGALACLQRGYRADAAFIPEPLEPRLMRAQVGPIWFRVEVDGDPQHASGAFSAGANAIEKAFLIIQ
ALKQLEIVWNARKVDDKHFCDHPHPIRFNLGKIEGGEWTSSVPARCVFEMRVATYPGQKLEDARAELETCIADAARADPF
LANRPPKMSYIDFMAEGYVLEGADEMEAVLRRGHTAVWGEPLTEHVTSATTDARFFGLYADTPAIVYGPICRMPHGYDEA
VDLDSVRKVTQTIALFIADWCGLEPIDPEMSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1789236, Length=248, Percent_Identity=27.4193548387097, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1790395, Length=348, Percent_Identity=26.1494252873563, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788816, Length=182, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24649206, Length=329, Percent_Identity=25.531914893617, Blast_Score=73, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010182
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.5.1.16

Molecular weight: Translated: 47629; Mature: 47498

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERIADEAILRAVDDGFARQVAFLADLVRFPSQRGEEHAAQSFMAAAYEADGYAVDMWR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCEEEEEEE
VDVDAIRNLPGFSPVAVSYDDAFNVVATHTPRNATGRSLILNGHIDVVPTGPLDRWVRDP
ECHHHHHCCCCCCCEEEECCCCCCEEEECCCCCCCCCEEEEECCEEEEECCCHHHHHCCC
YDPAIEDGWMHGRGAGDMKAGLSACLYALAALRRLGYQPAANVYLQSVVEEECTGNGALA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHH
CLQRGYRADAAFIPEPLEPRLMRAQVGPIWFRVEVDGDPQHASGAFSAGANAIEKAFLII
HHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCHHHCHHHHHHHHHHH
QALKQLEIVWNARKVDDKHFCDHPHPIRFNLGKIEGGEWTSSVPARCVFEMRVATYPGQK
HHHHHHHHHHCCHHCCCCCCCCCCCCEEEECCEECCCCCCCCCCHHHHEEEHHHCCCCCH
LEDARAELETCIADAARADPFLANRPPKMSYIDFMAEGYVLEGADEMEAVLRRGHTAVWG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCEEECCCHHHHHHHHCCCCEECC
EPLTEHVTSATTDARFFGLYADTPAIVYGPICRMPHGYDEAVDLDSVRKVTQTIALFIAD
CHHHHHHHHCCCCCEEEEEECCCCCEEECCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
WCGLEPIDPEMSS
HCCCCCCCCCCCC
>Mature Secondary Structure 
PERIADEAILRAVDDGFARQVAFLADLVRFPSQRGEEHAAQSFMAAAYEADGYAVDMWR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCEEEEEEE
VDVDAIRNLPGFSPVAVSYDDAFNVVATHTPRNATGRSLILNGHIDVVPTGPLDRWVRDP
ECHHHHHCCCCCCCEEEECCCCCCEEEECCCCCCCCCEEEEECCEEEEECCCHHHHHCCC
YDPAIEDGWMHGRGAGDMKAGLSACLYALAALRRLGYQPAANVYLQSVVEEECTGNGALA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHH
CLQRGYRADAAFIPEPLEPRLMRAQVGPIWFRVEVDGDPQHASGAFSAGANAIEKAFLII
HHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCHHHCHHHHHHHHHHH
QALKQLEIVWNARKVDDKHFCDHPHPIRFNLGKIEGGEWTSSVPARCVFEMRVATYPGQK
HHHHHHHHHHCCHHCCCCCCCCCCCCEEEECCEECCCCCCCCCCHHHHEEEHHHCCCCCH
LEDARAELETCIADAARADPFLANRPPKMSYIDFMAEGYVLEGADEMEAVLRRGHTAVWG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCEEECCCHHHHHHHHCCCCEECC
EPLTEHVTSATTDARFFGLYADTPAIVYGPICRMPHGYDEAVDLDSVRKVTQTIALFIAD
CHHHHHHHHCCCCCEEEEEECCCCCEEECCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
WCGLEPIDPEMSS
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N2-acetyl-L-ornithine; H2O

Specific reaction: N2-acetyl-L-ornithine + H2O = acetate + L-ornithine

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]