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The map label for this gene is yurM [H]

Identifier: 13475911

GI number: 13475911

Start: 5856096

End: 5856941

Strand: Direct

Name: yurM [H]

Synonym: mlr7094

Alternate gene names: 13475911

Gene position: 5856096-5856941 (Clockwise)

Preceding gene: 13475910

Following gene: 13475912

Centisome position: 83.23

GC content: 58.63

Gene sequence:

>846_bases
ATGATTGAAAGCAAGCGCCGCCGGCGGGTGATAGCCAACATCGCCACCTACTTCGTCCTCGCGACCCTGTCGATGTTCTG
CATCGGTCCGATGATCTGGATGTTTCTGACATCGCTCAAATATGAGGCCGACATCGTCACCCAGACCATGCAGTACATAC
CGAGACGCGTCACCTTCGATAATTATGTGGCGATCTGGACGCAGTCCGGCTTTCCGCGGCTGATCGCCAACAGCTTGGTC
GTCACCTTCCTGACGGTGACGATCTGCGTCGCCACGGGTACGCTTGCCGCCTATGCATTTTCACGCTTCGCATTTCGCGG
CCGAACGCAGCTCATGCTCGGTTATCTCATCGTGCGCATGTTCCCCGCGGTGATGATGATCATTCCCCTTTATGTCGTCA
TGCGCGGCGTCGGTCTCGTCGACAGCCGTTTCGGACTTGCGCTTGCCTATACGAGTTTCCTTTTGCCGCTATTCGTGTGG
ATGCTCAAAGGTTTCTTTGATTCCGCACCCAAGGAACTCGAGAGCGCGGCACGCATCGACGGCTCGACAAGGCTTGGCGC
CATGGTCCGTATCGTCATGCCGCTCGCGCGCAACGGCCTGGTGGCAAGTTCGGTGTTCATTGCCATCGCAGCCTGGAACG
AGTTCCTGTTCGCCCTGATGCTGACGACAGGGCAGGGATCCCGCACGTGGCCCGTGGGCCTGCAGTTGATGGTCGGCGAA
TTCCAGCTTCCATGGGGTGTCCTGGCGGCAGGCGGCATTCTTAGCATCCTGCCTGTCATCGTCCTCTTCGCCATCGTCCA
GCGAACCATGGTTCAGGGTCTCACTGCGGGCGCCATCAAAGGTTAG

Upstream 100 bases:

>100_bases
TTCGGCTACGCATCCGCCCTGTCGGTGGTGATGTTCGTGATCCTGATGATCTTCGCGACGGCATATATCCGCCTGTCCAG
GATCACCAAGGGAGACGGCG

Downstream 100 bases:

>100_bases
GAGTATTCGCATGGCGACACTTTCCATCAAGGATGTGCGCAAGTCCTATGGCTCCGTGCAGGTCCTTCACGGGGTCGATA
TCGAGCTCGAGGACGGAGGC

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MIESKRRRRVIANIATYFVLATLSMFCIGPMIWMFLTSLKYEADIVTQTMQYIPRRVTFDNYVAIWTQSGFPRLIANSLV
VTFLTVTICVATGTLAAYAFSRFAFRGRTQLMLGYLIVRMFPAVMMIIPLYVVMRGVGLVDSRFGLALAYTSFLLPLFVW
MLKGFFDSAPKELESAARIDGSTRLGAMVRIVMPLARNGLVASSVFIAIAAWNEFLFALMLTTGQGSRTWPVGLQLMVGE
FQLPWGVLAAGGILSILPVIVLFAIVQRTMVQGLTAGAIKG

Sequences:

>Translated_281_residues
MIESKRRRRVIANIATYFVLATLSMFCIGPMIWMFLTSLKYEADIVTQTMQYIPRRVTFDNYVAIWTQSGFPRLIANSLV
VTFLTVTICVATGTLAAYAFSRFAFRGRTQLMLGYLIVRMFPAVMMIIPLYVVMRGVGLVDSRFGLALAYTSFLLPLFVW
MLKGFFDSAPKELESAARIDGSTRLGAMVRIVMPLARNGLVASSVFIAIAAWNEFLFALMLTTGQGSRTWPVGLQLMVGE
FQLPWGVLAAGGILSILPVIVLFAIVQRTMVQGLTAGAIKG
>Mature_281_residues
MIESKRRRRVIANIATYFVLATLSMFCIGPMIWMFLTSLKYEADIVTQTMQYIPRRVTFDNYVAIWTQSGFPRLIANSLV
VTFLTVTICVATGTLAAYAFSRFAFRGRTQLMLGYLIVRMFPAVMMIIPLYVVMRGVGLVDSRFGLALAYTSFLLPLFVW
MLKGFFDSAPKELESAARIDGSTRLGAMVRIVMPLARNGLVASSVFIAIAAWNEFLFALMLTTGQGSRTWPVGLQLMVGE
FQLPWGVLAAGGILSILPVIVLFAIVQRTMVQGLTAGAIKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=277, Percent_Identity=33.2129963898917, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1790464, Length=298, Percent_Identity=30.5369127516779, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1789860, Length=233, Percent_Identity=29.1845493562232, Blast_Score=87, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31099; Mature: 31099

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIESKRRRRVIANIATYFVLATLSMFCIGPMIWMFLTSLKYEADIVTQTMQYIPRRVTFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NYVAIWTQSGFPRLIANSLVVTFLTVTICVATGTLAAYAFSRFAFRGRTQLMLGYLIVRM
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
FPAVMMIIPLYVVMRGVGLVDSRFGLALAYTSFLLPLFVWMLKGFFDSAPKELESAARID
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
GSTRLGAMVRIVMPLARNGLVASSVFIAIAAWNEFLFALMLTTGQGSRTWPVGLQLMVGE
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEECC
FQLPWGVLAAGGILSILPVIVLFAIVQRTMVQGLTAGAIKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIESKRRRRVIANIATYFVLATLSMFCIGPMIWMFLTSLKYEADIVTQTMQYIPRRVTFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NYVAIWTQSGFPRLIANSLVVTFLTVTICVATGTLAAYAFSRFAFRGRTQLMLGYLIVRM
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
FPAVMMIIPLYVVMRGVGLVDSRFGLALAYTSFLLPLFVWMLKGFFDSAPKELESAARID
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
GSTRLGAMVRIVMPLARNGLVASSVFIAIAAWNEFLFALMLTTGQGSRTWPVGLQLMVGE
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEECC
FQLPWGVLAAGGILSILPVIVLFAIVQRTMVQGLTAGAIKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]