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The map label for this gene is dppC [H]

Identifier: 13475857

GI number: 13475857

Start: 5798272

End: 5799123

Strand: Reverse

Name: dppC [H]

Synonym: mll7032

Alternate gene names: 13475857

Gene position: 5799123-5798272 (Counterclockwise)

Preceding gene: 13475858

Following gene: 13475856

Centisome position: 82.42

GC content: 64.44

Gene sequence:

>852_bases
ATGACGATGGCGCGCGTGGCAGCTTCCGGACGGTCCTTCCTTGGCCATAGCTACAATCTCGTGGGCATCGTGGCCTCGCT
GGTCATCCTGGCGTGGACGCTGATCGCCATCTTCGCGCCCACCATCATTCCCCATTCCATCGGCGACATCGTCGACGACG
ATTATTTCGGCCCGATGCGTCAGGGACTATGGCTCGGCTCGGATTATCTGGGGCGCGACATGCTCTCGCGGGTGCTGATG
GGCGCGCGCTACACGGTCGGCATATCGCTCGCCGCCGTCGCCATCGCCTGCTTCTCGGGCGTGGTGCTGGGGATGACCGC
GGCCGTCATCGGCGGCTGGGTAGACACCTGCCTCAGCCGCTTCCTGGATGCCATGAATTCCATCCCCAGCAAGCTGTTCG
GCCTTGTGGTCGTCGCCGCGGTCGGCTCGTCGATACCAGCGCTGATCCTGACGCTTGCCGTCATCTATATACCGGGCGCC
TACCGCTTCGCGCGGGCGCTCGCCGTCAACATCAACAGCATGGACTTCATGACCGTCGCTCGGGTCCGCGGCGAAAGCAC
CGCCTATCTCATCGGATCCGAAATCCTGCCCAACATCATCCGCCCGGTGCTGGCCGATTTCGGTCTGCGCTTCGTCTTCA
TCGTGCTCTTGCTCTCCGGCCTGTCCTTCCTCGGGCTCGGCCTGCAGCCGCCGCTCGCCGACTGGGGCGCGCTGGTGCGC
GAGAACATAGGGGGCCTGCCCTTTGCGGCGCCCGCCGTCATCATTCCCTCGCTGGCGATCGCCAGCCTCACCATCAGCGT
CAACCTGCTGATCGACAATTTGCCGCAGAAGATCAGGGACCGCGACGCATGA

Upstream 100 bases:

>100_bases
TGCCGCTGATCCAGAGTTGCGCGATGATCTTCTGCCTCGGCTACCTCTTGCTCATCACGGTCGCCGACATCATCGCCATC
ATGTCCAACCCGAGGATCAG

Downstream 100 bases:

>100_bases
CCAATCTCGTCGAGGTCAGGAATCTGAGGATCGAGGCGACGACCGACGCCGGACGTGTCGTTGAAATCATCAAGGGCGTC
AGCCTCGACATCGCCGACGG

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTMARVAASGRSFLGHSYNLVGIVASLVILAWTLIAIFAPTIIPHSIGDIVDDDYFGPMRQGLWLGSDYLGRDMLSRVLM
GARYTVGISLAAVAIACFSGVVLGMTAAVIGGWVDTCLSRFLDAMNSIPSKLFGLVVVAAVGSSIPALILTLAVIYIPGA
YRFARALAVNINSMDFMTVARVRGESTAYLIGSEILPNIIRPVLADFGLRFVFIVLLLSGLSFLGLGLQPPLADWGALVR
ENIGGLPFAAPAVIIPSLAIASLTISVNLLIDNLPQKIRDRDA

Sequences:

>Translated_283_residues
MTMARVAASGRSFLGHSYNLVGIVASLVILAWTLIAIFAPTIIPHSIGDIVDDDYFGPMRQGLWLGSDYLGRDMLSRVLM
GARYTVGISLAAVAIACFSGVVLGMTAAVIGGWVDTCLSRFLDAMNSIPSKLFGLVVVAAVGSSIPALILTLAVIYIPGA
YRFARALAVNINSMDFMTVARVRGESTAYLIGSEILPNIIRPVLADFGLRFVFIVLLLSGLSFLGLGLQPPLADWGALVR
ENIGGLPFAAPAVIIPSLAIASLTISVNLLIDNLPQKIRDRDA
>Mature_282_residues
TMARVAASGRSFLGHSYNLVGIVASLVILAWTLIAIFAPTIIPHSIGDIVDDDYFGPMRQGLWLGSDYLGRDMLSRVLMG
ARYTVGISLAAVAIACFSGVVLGMTAAVIGGWVDTCLSRFLDAMNSIPSKLFGLVVVAAVGSSIPALILTLAVIYIPGAY
RFARALAVNINSMDFMTVARVRGESTAYLIGSEILPNIIRPVLADFGLRFVFIVLLLSGLSFLGLGLQPPLADWGALVRE
NIGGLPFAAPAVIIPSLAIASLTISVNLLIDNLPQKIRDRDA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=256, Percent_Identity=33.59375, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787760, Length=217, Percent_Identity=33.6405529953917, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1789964, Length=247, Percent_Identity=33.6032388663968, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787549, Length=214, Percent_Identity=31.3084112149533, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789889, Length=218, Percent_Identity=27.5229357798165, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1787498, Length=267, Percent_Identity=29.2134831460674, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29990; Mature: 29859

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TMARVAASGRSFLGHSYNLVGIVASLVILAWTLIAIFAPTIIPHSIGDIVDDDYFGPMR
CHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QGLWLGSDYLGRDMLSRVLMGARYTVGISLAAVAIACFSGVVLGMTAAVIGGWVDTCLSR
HCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLDAMNSIPSKLFGLVVVAAVGSSIPALILTLAVIYIPGAYRFARALAVNINSMDFMTVA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH
RVRGESTAYLIGSEILPNIIRPVLADFGLRFVFIVLLLSGLSFLGLGLQPPLADWGALVR
HHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ENIGGLPFAAPAVIIPSLAIASLTISVNLLIDNLPQKIRDRDA
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]