| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475851
Identifier: 13475851
GI number: 13475851
Start: 5790892
End: 5792877
Strand: Direct
Name: 13475851
Synonym: mlr7025
Alternate gene names: NA
Gene position: 5790892-5792877 (Clockwise)
Preceding gene: 13475850
Following gene: 13475852
Centisome position: 82.3
GC content: 66.92
Gene sequence:
>1986_bases ATGTTTGACCGCACAAACCTCCAGGTTCTGGCCAACCATGCCCGCGCGGCCGCCGAGAACATGGCCCATACGCTGCATCG CACCGCGCACTCCGCCTTCGTCAAGGAGACGCAGGATTTTACGGTGATGCTGATGGATCGGTCGGGAGCGACCTTCGCCG TGCCGATGGAGCTTGGCGCCACCTGGTATCCGGGGCTTTCCTATCACCGCGCTATCGCGATGGTCGGCGACTACCGGCCA GGCGACGTTGCCTTCACCAACGATCCTTATTCCGGCCACGTCGCCACGCACGCGCCCGACACGCACCTGTGGAAGCCGGT CTTCGTCGACGGCGAGATCGTCGCCTGGGCCGGAGGGCATATCCACAACACCGACATGGGCGGGGCGGTGCCGGCTTCGC TCAGCCGGGCGCTCACCGAAATCCATCAGGAAGGCATCCGCTTTCCGCCGATGAAGCTGGTGCGGGAAGGTGTCTTCGAT GAGTCGATCCTGCGGATCATGAGTACCAATGTGCGCAAGCCCGACCTCAACATCGGCGACATCAAGGCGCTGGTTGGGGC GCTCAACACCGGCGAGCGCAAGATTCAGGCGATGGTGCGGAAGTTCGGCAAGGCCGGTTTCATCGAAGGCGTTTCGGCGC TTCTCGACCACGCGGAGGCGCAAGCGCGCGACGTGCTGCGCGCCATGCCCGACGGCACCTGGGAATTCGCCGACTACGCC GACGAGGATTCGGTCGAGGCCAATCCATGCCGGCTGAAGCTGAGGCTGACGATCAGGGGCGACGAGGCGATGCTCGACTT CACCGGCTCCGATCCGCAACTCGGTTCCTCGCTCAACGTGCCTTCGGGCGGCGATCCGCGCCACACCATGCTTTTGGTGG GCGTCTACTACGTGCTCTATACGCTGAACCCGAAGATCCTGCTCAACACAGGCCTCACCCGGCCGTTCACCTGCATCGCA CCCACGGGGTCGGTGCTGAATCCGGTCCATCCCGCCGCGGTCGGCATGCGCTCGCTCACCTGCGCCCGGCTGCGGTCGGT CATCTTCGGCGCCTTCTCGCAAGCGGTGCCGGAGCGCCTGCCCGCGGCTCCGGCTGGCAACAACTGCATCGTCAACGTCA TGACCACGGACGAGCGCACCAGCCGGACCGTCATCGCGGCGGTGAATCCGGTCGTGGGCGGCGGCGGCGCGATGCCGCAT CGCGACGGGACCAACGGCTCTGGCGCGGATGCCGCCTATCTCAAGAACACGCCGATCGAGATCACCGAGACCGAGACCCC CGTCGAATTCGTGAGATACGGGCTCGCCAGGGACAGTGGTGGCGCGGGCCGCTGGCGCGGCGGGCTGGCGACCGAGATGG CCTTTCGCGTCTTTGCCCCCGACTCCAGGATCACGGCGCGCAACCGCGACCGCAGTTTCTTCCGTCCTTGGGGTGTGCTG GGCGGCAAGGCCGCCGGCCTCTCGGACATGGTCGTCAATCCGGGGACCGGGCACGAGCGGCGGCTGGGCAATATCGACAC CGCGGTCCTGCAGCCCGGCGACGTGCTCGAGATCCGCTCCGCCGGAGGCGGTGGGCGCGGCGATCCATATGAACGCGAGC CCTGGCGGGTCGCGCAGGATGTGCGGCGCGGCTATCTTTCGCCGGGTGCGGCCGAACGCGACTATGGCGTCGTAGTCCGT GGCGACGAGGTTGACGAGCAGGCAACGGGGCAATTGCGCGCGCATCACGAGCCGGCCAGCAGCCATTTCCATTTCGGTCC GGAGCGCGAAGGCTACGAGGCGCAGTGGACGCCGGCAGCCTATGACCGGCTCACCGCCATACTGGGGGACTTGCCGATCC ACTGGCGGTTCTTCGCCAAGACGGAGATCTTCCGCCGCATGAAGGGACGCTCCGGGGCGGAGGGTGTCCAGGCGGCTTTC GATGCCGTCTGCGAACGCTTCCCCGAACTGCCGCGTCCCCACCCCGTGCGCGAGGCCGCGGAATGA
Upstream 100 bases:
>100_bases GTGGTCGTTCAGGAAGACACCACCTTCGCCATTCCCGCCGGAGCGCAGGCACGGGTAGACCGCCATCTCAACCTTCTGCT GACCTTCGCGGAGTGACGCC
Downstream 100 bases:
>100_bases TCACGGCCGGCCGTATCGTCCGGCTGGCCGAGCGCGACCGGGCGGGGGTGCATTTCTTTTTCGACGGGCAGATCCGTAGG GCGCTCGAGGGCGACACTGT
Product: hydantoin utilization protein B
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 661; Mature: 661
Protein sequence:
>661_residues MFDRTNLQVLANHARAAAENMAHTLHRTAHSAFVKETQDFTVMLMDRSGATFAVPMELGATWYPGLSYHRAIAMVGDYRP GDVAFTNDPYSGHVATHAPDTHLWKPVFVDGEIVAWAGGHIHNTDMGGAVPASLSRALTEIHQEGIRFPPMKLVREGVFD ESILRIMSTNVRKPDLNIGDIKALVGALNTGERKIQAMVRKFGKAGFIEGVSALLDHAEAQARDVLRAMPDGTWEFADYA DEDSVEANPCRLKLRLTIRGDEAMLDFTGSDPQLGSSLNVPSGGDPRHTMLLVGVYYVLYTLNPKILLNTGLTRPFTCIA PTGSVLNPVHPAAVGMRSLTCARLRSVIFGAFSQAVPERLPAAPAGNNCIVNVMTTDERTSRTVIAAVNPVVGGGGAMPH RDGTNGSGADAAYLKNTPIEITETETPVEFVRYGLARDSGGAGRWRGGLATEMAFRVFAPDSRITARNRDRSFFRPWGVL GGKAAGLSDMVVNPGTGHERRLGNIDTAVLQPGDVLEIRSAGGGGRGDPYEREPWRVAQDVRRGYLSPGAAERDYGVVVR GDEVDEQATGQLRAHHEPASSHFHFGPEREGYEAQWTPAAYDRLTAILGDLPIHWRFFAKTEIFRRMKGRSGAEGVQAAF DAVCERFPELPRPHPVREAAE
Sequences:
>Translated_661_residues MFDRTNLQVLANHARAAAENMAHTLHRTAHSAFVKETQDFTVMLMDRSGATFAVPMELGATWYPGLSYHRAIAMVGDYRP GDVAFTNDPYSGHVATHAPDTHLWKPVFVDGEIVAWAGGHIHNTDMGGAVPASLSRALTEIHQEGIRFPPMKLVREGVFD ESILRIMSTNVRKPDLNIGDIKALVGALNTGERKIQAMVRKFGKAGFIEGVSALLDHAEAQARDVLRAMPDGTWEFADYA DEDSVEANPCRLKLRLTIRGDEAMLDFTGSDPQLGSSLNVPSGGDPRHTMLLVGVYYVLYTLNPKILLNTGLTRPFTCIA PTGSVLNPVHPAAVGMRSLTCARLRSVIFGAFSQAVPERLPAAPAGNNCIVNVMTTDERTSRTVIAAVNPVVGGGGAMPH RDGTNGSGADAAYLKNTPIEITETETPVEFVRYGLARDSGGAGRWRGGLATEMAFRVFAPDSRITARNRDRSFFRPWGVL GGKAAGLSDMVVNPGTGHERRLGNIDTAVLQPGDVLEIRSAGGGGRGDPYEREPWRVAQDVRRGYLSPGAAERDYGVVVR GDEVDEQATGQLRAHHEPASSHFHFGPEREGYEAQWTPAAYDRLTAILGDLPIHWRFFAKTEIFRRMKGRSGAEGVQAAF DAVCERFPELPRPHPVREAAE >Mature_661_residues MFDRTNLQVLANHARAAAENMAHTLHRTAHSAFVKETQDFTVMLMDRSGATFAVPMELGATWYPGLSYHRAIAMVGDYRP GDVAFTNDPYSGHVATHAPDTHLWKPVFVDGEIVAWAGGHIHNTDMGGAVPASLSRALTEIHQEGIRFPPMKLVREGVFD ESILRIMSTNVRKPDLNIGDIKALVGALNTGERKIQAMVRKFGKAGFIEGVSALLDHAEAQARDVLRAMPDGTWEFADYA DEDSVEANPCRLKLRLTIRGDEAMLDFTGSDPQLGSSLNVPSGGDPRHTMLLVGVYYVLYTLNPKILLNTGLTRPFTCIA PTGSVLNPVHPAAVGMRSLTCARLRSVIFGAFSQAVPERLPAAPAGNNCIVNVMTTDERTSRTVIAAVNPVVGGGGAMPH RDGTNGSGADAAYLKNTPIEITETETPVEFVRYGLARDSGGAGRWRGGLATEMAFRVFAPDSRITARNRDRSFFRPWGVL GGKAAGLSDMVVNPGTGHERRLGNIDTAVLQPGDVLEIRSAGGGGRGDPYEREPWRVAQDVRRGYLSPGAAERDYGVVVR GDEVDEQATGQLRAHHEPASSHFHFGPEREGYEAQWTPAAYDRLTAILGDLPIHWRFFAKTEIFRRMKGRSGAEGVQAAF DAVCERFPELPRPHPVREAAE
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=559, Percent_Identity=30.2325581395349, Blast_Score=182, Evalue=8e-46, Organism=Caenorhabditis elegans, GI133901900, Length=568, Percent_Identity=28.8732394366197, Blast_Score=159, Evalue=5e-39, Organism=Caenorhabditis elegans, GI133901902, Length=533, Percent_Identity=28.3302063789869, Blast_Score=140, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6322634, Length=560, Percent_Identity=28.0357142857143, Blast_Score=164, Evalue=3e-41, Organism=Drosophila melanogaster, GI45550492, Length=577, Percent_Identity=25.4766031195841, Blast_Score=136, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 71886; Mature: 71886
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: PS00276 CHANNEL_COLICIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDRTNLQVLANHARAAAENMAHTLHRTAHSAFVKETQDFTVMLMDRSGATFAVPMELGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEHHCCC TWYPGLSYHRAIAMVGDYRPGDVAFTNDPYSGHVATHAPDTHLWKPVFVDGEIVAWAGGH CCCCCCHHHHEEEEECCCCCCCEEECCCCCCCCEECCCCCCCCCCEEEECCEEEEEECCE IHNTDMGGAVPASLSRALTEIHQEGIRFPPMKLVREGVFDESILRIMSTNVRKPDLNIGD EECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHH IKALVGALNTGERKIQAMVRKFGKAGFIEGVSALLDHAEAQARDVLRAMPDGTWEFADYA HHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DEDSVEANPCRLKLRLTIRGDEAMLDFTGSDPQLGSSLNVPSGGDPRHTMLLVGVYYVLY CCCCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH TLNPKILLNTGLTRPFTCIAPTGSVLNPVHPAAVGMRSLTCARLRSVIFGAFSQAVPERL HCCCCEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAAPAGNNCIVNVMTTDERTSRTVIAAVNPVVGGGGAMPHRDGTNGSGADAAYLKNTPIE CCCCCCCCEEEEEEECCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCEECCCCEE ITETETPVEFVRYGLARDSGGAGRWRGGLATEMAFRVFAPDSRITARNRDRSFFRPWGVL EECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCC GGKAAGLSDMVVNPGTGHERRLGNIDTAVLQPGDVLEIRSAGGGGRGDPYEREPWRVAQD CCCCCCCCCEEECCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHH VRRGYLSPGAAERDYGVVVRGDEVDEQATGQLRAHHEPASSHFHFGPEREGYEAQWTPAA HHHCCCCCCCCCCCCEEEEECCCCCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCHHH YDRLTAILGDLPIHWRFFAKTEIFRRMKGRSGAEGVQAAFDAVCERFPELPRPHPVREAA HHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCC E C >Mature Secondary Structure MFDRTNLQVLANHARAAAENMAHTLHRTAHSAFVKETQDFTVMLMDRSGATFAVPMELGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEHHCCC TWYPGLSYHRAIAMVGDYRPGDVAFTNDPYSGHVATHAPDTHLWKPVFVDGEIVAWAGGH CCCCCCHHHHEEEEECCCCCCCEEECCCCCCCCEECCCCCCCCCCEEEECCEEEEEECCE IHNTDMGGAVPASLSRALTEIHQEGIRFPPMKLVREGVFDESILRIMSTNVRKPDLNIGD EECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHH IKALVGALNTGERKIQAMVRKFGKAGFIEGVSALLDHAEAQARDVLRAMPDGTWEFADYA HHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DEDSVEANPCRLKLRLTIRGDEAMLDFTGSDPQLGSSLNVPSGGDPRHTMLLVGVYYVLY CCCCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH TLNPKILLNTGLTRPFTCIAPTGSVLNPVHPAAVGMRSLTCARLRSVIFGAFSQAVPERL HCCCCEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAAPAGNNCIVNVMTTDERTSRTVIAAVNPVVGGGGAMPHRDGTNGSGADAAYLKNTPIE CCCCCCCCEEEEEEECCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCEECCCCEE ITETETPVEFVRYGLARDSGGAGRWRGGLATEMAFRVFAPDSRITARNRDRSFFRPWGVL EECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCC GGKAAGLSDMVVNPGTGHERRLGNIDTAVLQPGDVLEIRSAGGGGRGDPYEREPWRVAQD CCCCCCCCCEEECCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHH VRRGYLSPGAAERDYGVVVRGDEVDEQATGQLRAHHEPASSHFHFGPEREGYEAQWTPAA HHHCCCCCCCCCCCCEEEEECCCCCCHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCHHH YDRLTAILGDLPIHWRFFAKTEIFRRMKGRSGAEGVQAAFDAVCERFPELPRPHPVREAA HHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]