Click here to switch to the map view.

The map label for this gene is ytlD [H]

Identifier: 13475807

GI number: 13475807

Start: 5737985

End: 5738758

Strand: Reverse

Name: ytlD [H]

Synonym: mll6977

Alternate gene names: 13475807

Gene position: 5738758-5737985 (Counterclockwise)

Preceding gene: 13475808

Following gene: 13475806

Centisome position: 81.56

GC content: 59.69

Gene sequence:

>774_bases
ATGAACGCCACGACTGAACGCCTCATCCAACTCGCACTGCTGGTGGCAATTGTCGGCGGCTGGCAGCTCGGTGTCGCGGC
GGGCATTATCGACGTGTTCTTCTTCCCGGCTCCTCTCGACATCCTCAAGCAGGTGGCGTCCTGGGTAATGGACACCAGCT
TCTATAAGCATGTGGCCATCACCTTGACGGAAACTGTACTCGGCTATCTTGTCGGAACGGCACTCGGCGTGGCAGCAGGC
GTCTGGCTCGGCCTCAGTCGTTCTACAGCGCGAATTCTGGATCCTTTCATCAAGGGTTTGAACGCGATACCGCGCGTCGT
GCTTGCGCCGATATTCGTACTCTGGCTCGGCCTCGGTCTCTGGTCCAAGGTGGCGCTCGCCGTCACGCTGGTGTTCTTCG
TCACCTTCTTCAACGCCATGCAGGGCGTGCGTGAAGTGAACCCGGTCGTGCTGTCGAACACCCGCATCCTGGGGGCCAAG
CGGTCTGACCTGCTTCGCCACGTCTACTTCCCGGCAGCGGCAAGCTGGATCCTGTCTTCATTGCGCACTTCGGTCGGGTT
TGCCGTCGTGGGGGCGATTATCGGCGAGTATCTCGGCTCCTCCGCCGGGCTTGGCTATCTGATCGCTCAGGCGGAAGGCA
ATTTCGATGCGGTCGGTGTCTTCGCAGGGATCTTGATCCTCGCGATATTTGTACTGATTATCGACAGCATCCTGGATGTC
GCCGAGAAGCACTTCATCAAGTGGCGGCCGAGCGCTTCCGAACGGCCTGTGTGA

Upstream 100 bases:

>100_bases
CAACGCCCGCGCGATGTCGCTGAAATCAAGCTCGATCCACGTTTCATGGATCTTTATCGCAACATCTGGTCATCGCTGCG
TAGCGAAGTGGAGAAAAGCT

Downstream 100 bases:

>100_bases
GGATCTTCAACGGCAACCGAGAGCTTGTTCACAACCGCTCCCCTCCGAGCCAAGGAGGGAGAGCGCAGTATTCTGCGCAC
ACGCTGGGTCCGAAACTGGG

Product: ABC transporter, permease protein

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNATTERLIQLALLVAIVGGWQLGVAAGIIDVFFFPAPLDILKQVASWVMDTSFYKHVAITLTETVLGYLVGTALGVAAG
VWLGLSRSTARILDPFIKGLNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTFFNAMQGVREVNPVVLSNTRILGAK
RSDLLRHVYFPAAASWILSSLRTSVGFAVVGAIIGEYLGSSAGLGYLIAQAEGNFDAVGVFAGILILAIFVLIIDSILDV
AEKHFIKWRPSASERPV

Sequences:

>Translated_257_residues
MNATTERLIQLALLVAIVGGWQLGVAAGIIDVFFFPAPLDILKQVASWVMDTSFYKHVAITLTETVLGYLVGTALGVAAG
VWLGLSRSTARILDPFIKGLNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTFFNAMQGVREVNPVVLSNTRILGAK
RSDLLRHVYFPAAASWILSSLRTSVGFAVVGAIIGEYLGSSAGLGYLIAQAEGNFDAVGVFAGILILAIFVLIIDSILDV
AEKHFIKWRPSASERPV
>Mature_257_residues
MNATTERLIQLALLVAIVGGWQLGVAAGIIDVFFFPAPLDILKQVASWVMDTSFYKHVAITLTETVLGYLVGTALGVAAG
VWLGLSRSTARILDPFIKGLNAIPRVVLAPIFVLWLGLGLWSKVALAVTLVFFVTFFNAMQGVREVNPVVLSNTRILGAK
RSDLLRHVYFPAAASWILSSLRTSVGFAVVGAIIGEYLGSSAGLGYLIAQAEGNFDAVGVFAGILILAIFVLIIDSILDV
AEKHFIKWRPSASERPV

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786564, Length=197, Percent_Identity=29.9492385786802, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87081802, Length=241, Percent_Identity=27.3858921161826, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27582; Mature: 27582

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATTERLIQLALLVAIVGGWQLGVAAGIIDVFFFPAPLDILKQVASWVMDTSFYKHVAI
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
TLTETVLGYLVGTALGVAAGVWLGLSRSTARILDPFIKGLNAIPRVVLAPIFVLWLGLGL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WSKVALAVTLVFFVTFFNAMQGVREVNPVVLSNTRILGAKRSDLLRHVYFPAAASWILSS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEECCHHHHHHHHHHHHHHHHHHHHH
LRTSVGFAVVGAIIGEYLGSSAGLGYLIAQAEGNFDAVGVFAGILILAIFVLIIDSILDV
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AEKHFIKWRPSASERPV
HHHHHEECCCCCCCCCC
>Mature Secondary Structure
MNATTERLIQLALLVAIVGGWQLGVAAGIIDVFFFPAPLDILKQVASWVMDTSFYKHVAI
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
TLTETVLGYLVGTALGVAAGVWLGLSRSTARILDPFIKGLNAIPRVVLAPIFVLWLGLGL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WSKVALAVTLVFFVTFFNAMQGVREVNPVVLSNTRILGAKRSDLLRHVYFPAAASWILSS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEECCHHHHHHHHHHHHHHHHHHHHH
LRTSVGFAVVGAIIGEYLGSSAGLGYLIAQAEGNFDAVGVFAGILILAIFVLIIDSILDV
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AEKHFIKWRPSASERPV
HHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]