| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is tag [H]
Identifier: 13475764
GI number: 13475764
Start: 5693595
End: 5694233
Strand: Direct
Name: tag [H]
Synonym: mlr6925
Alternate gene names: 13475764
Gene position: 5693595-5694233 (Clockwise)
Preceding gene: 13475762
Following gene: 13475767
Centisome position: 80.92
GC content: 60.88
Gene sequence:
>639_bases ATGAGCAATGAAAACACCGGCCTGCTTGCCGGTCCCGATGGTGTCGCGCGCTGCTTCTGGCACGGCAACCTGCCCGACTA TCTGCACTACCATGATCATGAATGGGGCCGGCCGGTGGCAGACGACCGCAGGCTTTTCGAAAAGATCTGCCTTGAAGGTT TTCAGTCGGGCCTGTCGTGGCTGACCATCCTGCGCAAACGCGAGAATTTTCGCGAGGCCTTCGCCGGCTTCGATTTCGAC AAAATCGCCGCCTTCACCGACAAGGATGTCGAGCGCCTGCTCGGCAATGCCGGCATCATCCGCCATCGCGGCAAGATCGT TTCGACCATCAACAACGCCAAACGCGCCCGCGAAATGGTCGACGAGTTCGGTTCGCTCGCCGCCTGGTTCTGGAAGTTCG AACCCGGCAAGGCGGAGCGGCCCGAAATCGTCGACCTCGCCCATCTGCGCGCCAACCCGACGACGGCGGTCTCGGTGCGG ATATCGAAGGAGTTGAAGAAGCGCGGCTGGAGTTTTGTCGGCCCGACCACGGTCTATGCCTTCATGCAGGCCATGGGCCT GGTCAACGACCATCTCGAAGGCTGTGTCTGCCGCAAGCAGGTCGAGAAGGAACGCAAGGCTTTCAAACGGCCGACGTAG
Upstream 100 bases:
>100_bases TGTCAGTAAACCTTTTGGTGTGGTTACCGCCGGGTTCAGGAATCTGGTAAAGCCACGGTAAAAGCAGCGCTAGAGCGCAT TAACGGATGGATTTTTCGCA
Downstream 100 bases:
>100_bases CTTCCTTCTCCCCGTTCACGGGAGAAGGTGCCGGCAGGCGGACGAGGGCGGCGCGAACTTGCGCAGGCTGGGCGTTACCC CTCACCCTGCTCCGCCCGGC
Product: DNA-3-methyladenine glycosylase I
Products: NA
Alternate protein names: 3-methyladenine-DNA glycosylase I, constitutive; TAG I; DNA-3-methyladenine glycosidase I; DNA-3-methyladenine glycosylase I [H]
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSNENTGLLAGPDGVARCFWHGNLPDYLHYHDHEWGRPVADDRRLFEKICLEGFQSGLSWLTILRKRENFREAFAGFDFD KIAAFTDKDVERLLGNAGIIRHRGKIVSTINNAKRAREMVDEFGSLAAWFWKFEPGKAERPEIVDLAHLRANPTTAVSVR ISKELKKRGWSFVGPTTVYAFMQAMGLVNDHLEGCVCRKQVEKERKAFKRPT
Sequences:
>Translated_212_residues MSNENTGLLAGPDGVARCFWHGNLPDYLHYHDHEWGRPVADDRRLFEKICLEGFQSGLSWLTILRKRENFREAFAGFDFD KIAAFTDKDVERLLGNAGIIRHRGKIVSTINNAKRAREMVDEFGSLAAWFWKFEPGKAERPEIVDLAHLRANPTTAVSVR ISKELKKRGWSFVGPTTVYAFMQAMGLVNDHLEGCVCRKQVEKERKAFKRPT >Mature_211_residues SNENTGLLAGPDGVARCFWHGNLPDYLHYHDHEWGRPVADDRRLFEKICLEGFQSGLSWLTILRKRENFREAFAGFDFDK IAAFTDKDVERLLGNAGIIRHRGKIVSTINNAKRAREMVDEFGSLAAWFWKFEPGKAERPEIVDLAHLRANPTTAVSVRI SKELKKRGWSFVGPTTVYAFMQAMGLVNDHLEGCVCRKQVEKERKAFKRPT
Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789971, Length=182, Percent_Identity=50, Blast_Score=184, Evalue=4e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005019 - InterPro: IPR011257 - InterPro: IPR004597 [H]
Pfam domain/function: PF03352 Adenine_glyco [H]
EC number: =3.2.2.20 [H]
Molecular weight: Translated: 24266; Mature: 24135
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNENTGLLAGPDGVARCFWHGNLPDYLHYHDHEWGRPVADDRRLFEKICLEGFQSGLSW CCCCCCCEEECCHHHHHEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LTILRKRENFREAFAGFDFDKIAAFTDKDVERLLGNAGIIRHRGKIVSTINNAKRAREMV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH DEFGSLAAWFWKFEPGKAERPEIVDLAHLRANPTTAVSVRISKELKKRGWSFVGPTTVYA HHHHHHHHHHHEECCCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHH FMQAMGLVNDHLEGCVCRKQVEKERKAFKRPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNENTGLLAGPDGVARCFWHGNLPDYLHYHDHEWGRPVADDRRLFEKICLEGFQSGLSW CCCCCCEEECCHHHHHEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LTILRKRENFREAFAGFDFDKIAAFTDKDVERLLGNAGIIRHRGKIVSTINNAKRAREMV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH DEFGSLAAWFWKFEPGKAERPEIVDLAHLRANPTTAVSVRISKELKKRGWSFVGPTTVYA HHHHHHHHHHHEECCCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHH FMQAMGLVNDHLEGCVCRKQVEKERKAFKRPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3536912; 3520491; 8041620; 9278503 [H]