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The map label for this gene is ybcL [C]

Identifier: 13475666

GI number: 13475666

Start: 5589568

End: 5590026

Strand: Direct

Name: ybcL [C]

Synonym: mlr6790

Alternate gene names: 13475666

Gene position: 5589568-5590026 (Clockwise)

Preceding gene: 13475665

Following gene: 13475667

Centisome position: 79.44

GC content: 59.91

Gene sequence:

>459_bases
ATGCCCCTGAACATCAAGGATCTCAAGATTACGTCAGCGGATTTCCAGCCGCTCGGCAAAATGCGCGACGAGCATGCCGG
CGACAAGGGCAACGTATTGCCCAGGCTCACCATCAGTGGCGTCCCGGCAGGGACGAAGGAGCTCGCGGTCATCTGCCACG
ATCCCGACGCGCCCTTGCCCAATGGCTTCACGCATTGGGTCGTCTACGGCATCGATCCGACGGCCACGGATCTCTCTGGA
GCACAGGAAAAGTTCCGCGTGGGACCCAACGGCGCCGGTGGCAAGCAATATTACGGGCCTCAGCCGCCCGCTGGCCATGG
AGAGCATCACTACTATTTCTGGGTCTATGCCCTGGACACGAAGGTCGAGGGGACGCCCACCAGGGAGGAGTTCCTGCAGA
AATACGCCGGCAACATCATCGAGCAGAACAGGATCGTCGGCATCTACGAAAACAAGTGA

Upstream 100 bases:

>100_bases
TCGCATCGGGTCCGCGCGTGCACCAGCGCGTCGGCGGCAAATCCGTCGCCGACCTCAAGGCCGGCGTCTAGTTCGATCGA
AATTGCTGAAGGACGAATTC

Downstream 100 bases:

>100_bases
AATCCGCGGCCTGGCGACCAATAACAACAACAAGAATGGTCGCCATCGCCGCAATGGGAGAATTTGGAAATGACAGACAA
CAGCCCAGTGCGTCGGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MPLNIKDLKITSADFQPLGKMRDEHAGDKGNVLPRLTISGVPAGTKELAVICHDPDAPLPNGFTHWVVYGIDPTATDLSG
AQEKFRVGPNGAGGKQYYGPQPPAGHGEHHYYFWVYALDTKVEGTPTREEFLQKYAGNIIEQNRIVGIYENK

Sequences:

>Translated_152_residues
MPLNIKDLKITSADFQPLGKMRDEHAGDKGNVLPRLTISGVPAGTKELAVICHDPDAPLPNGFTHWVVYGIDPTATDLSG
AQEKFRVGPNGAGGKQYYGPQPPAGHGEHHYYFWVYALDTKVEGTPTREEFLQKYAGNIIEQNRIVGIYENK
>Mature_151_residues
PLNIKDLKITSADFQPLGKMRDEHAGDKGNVLPRLTISGVPAGTKELAVICHDPDAPLPNGFTHWVVYGIDPTATDLSGA
QEKFRVGPNGAGGKQYYGPQPPAGHGEHHYYFWVYALDTKVEGTPTREEFLQKYAGNIIEQNRIVGIYENK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=152, Percent_Identity=33.5526315789474, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786990, Length=128, Percent_Identity=35.15625, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 16733; Mature: 16602

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLNIKDLKITSADFQPLGKMRDEHAGDKGNVLPRLTISGVPAGTKELAVICHDPDAPLP
CCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCC
NGFTHWVVYGIDPTATDLSGAQEKFRVGPNGAGGKQYYGPQPPAGHGEHHYYFWVYALDT
CCCEEEEEEECCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEC
KVEGTPTREEFLQKYAGNIIEQNRIVGIYENK
CCCCCCCHHHHHHHHHCCCCCCCEEEEEEECC
>Mature Secondary Structure 
PLNIKDLKITSADFQPLGKMRDEHAGDKGNVLPRLTISGVPAGTKELAVICHDPDAPLP
CCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCC
NGFTHWVVYGIDPTATDLSGAQEKFRVGPNGAGGKQYYGPQPPAGHGEHHYYFWVYALDT
CCCEEEEEEECCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEC
KVEGTPTREEFLQKYAGNIIEQNRIVGIYENK
CCCCCCCHHHHHHHHHCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]