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The map label for this gene is arcB [H]

Identifier: 13475655

GI number: 13475655

Start: 5578738

End: 5579793

Strand: Reverse

Name: arcB [H]

Synonym: mll6776

Alternate gene names: 13475655

Gene position: 5579793-5578738 (Counterclockwise)

Preceding gene: 13475656

Following gene: 13475653

Centisome position: 79.3

GC content: 62.97

Gene sequence:

>1056_bases
ATGACCACGGCAAAGCTGAACATCGTCCCCTTCGTCAGCGTCGACCGCATGATGAAGCTGGTGCTTGCCATCGGCGTCGA
ACGCTTTCTGACCGAGCTCGCCAGCTACATCGAGGAAGATTTTCGGCGCTGGGAGCTTTTCGACAAGACGCCGCGCATTG
CCTCGCACAGCCATGACGGCGTCATCGAGCTGATGCCGACAAGCGATGGGCGGCTCTATGGCTTCAAATATGTCAACGGC
CATCCCAAGAACATGCGCCAGGGTCTGCAGACGGTCACCGCCTTCGGCGTGCTTGCCGATGTCGGCAGCGGCTACCCGAT
GCTGCTCACCGAAATGACCATTCTCACCGCGCTGCGCACCGCCGCCACATCCGCCGTCGCGGCCAAATATCTGGCGCCGC
GCGGCGCGCGCACCATGGCCATCATCGGCAATGGCGCACAGTCGGAATTCCAGGCAATCGCCTTCAAGGCGCTGGCCGGC
GTCGACCGGCTCAGGCTCTACGACATCGACCGGTCCGCCTCGCTGAAATGCGCCAAGAACCTGGCTGGCATGGGATTTGA
CATCACCATCTGCGAAACCGGACAGGAAGCGGTCGAAGGTGCCGGGATCATCACGACCGTTACCGCCGACAAGCAATGCG
CCACCATCCTCACCGACAACATGGTCGGCGCCGGCGTCCACATCAACGCCGTCGGCGGCGATTGCCCCGGCAAGACGGAA
CTGCACAGGGACATCCTGCTGCGCTCCGACATTTTCGTCGAGTTCCCGCCGCAGACACGCATCGAGGGCGAGATCCAGCA
GTTGGATCCCAACCATCCGGTGACAGAGCTCTGGCAAGTGGTCGCCGCCAAGGTGCCCGGCCGCCGGGACGCCAAGCAGA
TCACGCTGTTCGATTCCGTCGGCTTCGCCATCGAGGACTTTTCGGCGTTGCGCTATGTGCGCGACCAGTTGCAGGCAACG
GGCCTCTACGAGGAGCTCGATCTGCTGGCCGATCCGGACGAACCGCGCGACCTCTATGGCATGCTGCTGAGAGCGGCCAT
GCAGACCGCGGCATAA

Upstream 100 bases:

>100_bases
GTGGCCGGACCGCGACGCTCATGGTCGACCTGACGGCGAGCCTGATGGGCCGCCGCATCATGGATCGCCCGACCCGCAGC
CATTCCGGGAGCTTTTGATC

Downstream 100 bases:

>100_bases
AAAACCGATGGGATGCCGCGAGCGATCCCGCAGGCATTGATAGTGACCGCGGGTCTTGTCGATCGTCTCTCCGACGAGAT
GAAGGGCCGTCGACCTTACC

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MTTAKLNIVPFVSVDRMMKLVLAIGVERFLTELASYIEEDFRRWELFDKTPRIASHSHDGVIELMPTSDGRLYGFKYVNG
HPKNMRQGLQTVTAFGVLADVGSGYPMLLTEMTILTALRTAATSAVAAKYLAPRGARTMAIIGNGAQSEFQAIAFKALAG
VDRLRLYDIDRSASLKCAKNLAGMGFDITICETGQEAVEGAGIITTVTADKQCATILTDNMVGAGVHINAVGGDCPGKTE
LHRDILLRSDIFVEFPPQTRIEGEIQQLDPNHPVTELWQVVAAKVPGRRDAKQITLFDSVGFAIEDFSALRYVRDQLQAT
GLYEELDLLADPDEPRDLYGMLLRAAMQTAA

Sequences:

>Translated_351_residues
MTTAKLNIVPFVSVDRMMKLVLAIGVERFLTELASYIEEDFRRWELFDKTPRIASHSHDGVIELMPTSDGRLYGFKYVNG
HPKNMRQGLQTVTAFGVLADVGSGYPMLLTEMTILTALRTAATSAVAAKYLAPRGARTMAIIGNGAQSEFQAIAFKALAG
VDRLRLYDIDRSASLKCAKNLAGMGFDITICETGQEAVEGAGIITTVTADKQCATILTDNMVGAGVHINAVGGDCPGKTE
LHRDILLRSDIFVEFPPQTRIEGEIQQLDPNHPVTELWQVVAAKVPGRRDAKQITLFDSVGFAIEDFSALRYVRDQLQAT
GLYEELDLLADPDEPRDLYGMLLRAAMQTAA
>Mature_350_residues
TTAKLNIVPFVSVDRMMKLVLAIGVERFLTELASYIEEDFRRWELFDKTPRIASHSHDGVIELMPTSDGRLYGFKYVNGH
PKNMRQGLQTVTAFGVLADVGSGYPMLLTEMTILTALRTAATSAVAAKYLAPRGARTMAIIGNGAQSEFQAIAFKALAGV
DRLRLYDIDRSASLKCAKNLAGMGFDITICETGQEAVEGAGIITTVTADKQCATILTDNMVGAGVHINAVGGDCPGKTEL
HRDILLRSDIFVEFPPQTRIEGEIQQLDPNHPVTELWQVVAAKVPGRRDAKQITLFDSVGFAIEDFSALRYVRDQLQATG
LYEELDLLADPDEPRDLYGMLLRAAMQTAA

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=223, Percent_Identity=28.2511210762332, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4503065, Length=223, Percent_Identity=28.2511210762332, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24642678, Length=243, Percent_Identity=31.2757201646091, Blast_Score=75, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 38387; Mature: 38255

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAKLNIVPFVSVDRMMKLVLAIGVERFLTELASYIEEDFRRWELFDKTPRIASHSHDG
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VIELMPTSDGRLYGFKYVNGHPKNMRQGLQTVTAFGVLADVGSGYPMLLTEMTILTALRT
EEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AATSAVAAKYLAPRGARTMAIIGNGAQSEFQAIAFKALAGVDRLRLYDIDRSASLKCAKN
HHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH
LAGMGFDITICETGQEAVEGAGIITTVTADKQCATILTDNMVGAGVHINAVGGDCPGKTE
HCCCCEEEEEECCCHHHHCCCCEEEEEECCCHHHHHHHCCCCCCCEEEEECCCCCCCCHH
LHRDILLRSDIFVEFPPQTRIEGEIQQLDPNHPVTELWQVVAAKVPGRRDAKQITLFDSV
HHHHHHHHCCEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCC
GFAIEDFSALRYVRDQLQATGLYEELDLLADPDEPRDLYGMLLRAAMQTAA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTAKLNIVPFVSVDRMMKLVLAIGVERFLTELASYIEEDFRRWELFDKTPRIASHSHDG
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VIELMPTSDGRLYGFKYVNGHPKNMRQGLQTVTAFGVLADVGSGYPMLLTEMTILTALRT
EEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AATSAVAAKYLAPRGARTMAIIGNGAQSEFQAIAFKALAGVDRLRLYDIDRSASLKCAKN
HHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH
LAGMGFDITICETGQEAVEGAGIITTVTADKQCATILTDNMVGAGVHINAVGGDCPGKTE
HCCCCEEEEEECCCHHHHCCCCEEEEEECCCHHHHHHHCCCCCCCEEEEECCCCCCCCHH
LHRDILLRSDIFVEFPPQTRIEGEIQQLDPNHPVTELWQVVAAKVPGRRDAKQITLFDSV
HHHHHHHHCCEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCC
GFAIEDFSALRYVRDQLQATGLYEELDLLADPDEPRDLYGMLLRAAMQTAA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9375792 [H]