| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475637
Identifier: 13475637
GI number: 13475637
Start: 5555344
End: 5556984
Strand: Direct
Name: 13475637
Synonym: mlr6757
Alternate gene names: NA
Gene position: 5555344-5556984 (Clockwise)
Preceding gene: 13475636
Following gene: 13475638
Centisome position: 78.96
GC content: 59.6
Gene sequence:
>1641_bases GTGTTCGAATCGATAAACGATCTCCTCGCGATTTCTGGCCGAAGTGTCGTTTCAGTCGACAATGCCGATAGTCAATCAGG GTTAAAAAGTATTTGTAAGGTCGAGAAGCAAATCATTTCCGCGCTTTCACGGATGGACAAAGGATTCGCAAAGCGAGACC AAAGAGAAAGCGCACCCGTTGCGCATGCTGGAGTTATCAATAGTCACGTCTCTCGAAAGTCTCCGGGCCCTCCCTCCGGT GTTCTTCCAATCGCCACACCTCGGCGAAACAAGGACGTCGGCTCGCGGCTCGCGCGGGCGAGCGTCTTCGCTCTCTTGAT CTATATCGGAGGTGCTGGGCTGACCAGCCTTGCACAACTGGCCATTGCCCGCCTCATCGGGCCCCGCGACTACGGGATTT ATGCCTACGTTCTGGCCTGGACCTCCGTGCTCGCCTATCTGGCGACGCTTGGTTTCAATGTGTCTTTGTTGCGTTTCGTG CCCGCTTATAGAGCCAACGGCAGGCTTGATCTGGCGCGAGGGGTGATAAGATTCGCCCTGCAGAGATCGCTTCTCGCGGC GACACTGTTCGGGATGGCGGGTGCTGCCCTGGTCCTGTTCTTTTCAGGGCAGGCGCAACCGGATCATACGCAAAGAGGAC TGGAGATAAGCACCATGCTTGGCATGGCGGCGGTACCCTTGATTACCGCTTATGCCATTGGCGCTACGCTGGTGCGTGCT TTCGGCGGCGTCGTCTCGGCGTTGTTGCCGGAGCGCATCGTGCGAGACGGGCTGCTGCTGATACTGGTGGCGATCATGGC CAAGTCCGGATTGTGGGTGGTGCACGCGCCGCAGGTGATGTTGGCGGTGCTGACAAGTTCCGCCATCACGGTTGGGCTGG TGTTCATCACCGCCAGGAAGTTCGAACCACCTGGCCTGCGGCAGGCTCTGCCCGCTTACGAACCGAGGGGATGGTGGCTT GCCGTCCCCCCGCTCATGCTCATCACCGGTCTCGATGTTTTCGTCAGTCGGGCTGGCGTGCTGGTGTTGGGCTGGACCGA CCATATCCGTGAGGCCGGCATATTCGCCCTGGCATTGAACGTGGCGATGCTTGTGGGACTTTCCCGCATCGCTGTCGCCA CCATGTTTTCGCCAACAGCGGCCGATCTGCATGCCAGAGGCGATCAAAAAGGCCTGCAGCAGCTGTTCGCGCGGGCCACC TTATTGTCCGCGGGCGGCGCCGTTGTGGTGGCCATCCCCATGATCGTGATTGCCGAGCCGTTCTTGAGCTTCTTCGGGGA GGGCTTCGACGCGGGAGCGCCAATCGCGCGGGTTCTCATTTTGGGCTATGTTTTCGTTGCGCTGTGCGGACCTCAGCAGA ATCTGCTGGCGATGACCGGAAACGAATGGGCCGCGGCAACGACCATGATTGCCGGCGCGATGGCCAATATCATAGCCTGT GCCGTGGGTGTCGAGATATACGGCCCAATCGGCGCGGCTGTCGGTGTCGCGCTTGCGTTGGCCATCTGGAACGTTGCCAT GGCCGTCTATATCGGCAAGCGACTGAAAATCCTCCCTGGCCTGGTGTCTGCCGTGCTCTCGATCAAGGCGAGCGCCATCG ACGCCCAACAATGGAATTGGTTCTTGAGGGCGGGCAAGTGA
Upstream 100 bases:
>100_bases TGCGGTCGTGGAGAACCGTCTCCGGCAGCGGATGGAGCACCAGCCGCCGGCGGAACGGATTTTCGAGGCCGACTTGAACG TGAATATGAGCTCCTTCGGC
Downstream 100 bases:
>100_bases GGGCACTCCATCCGTCGGTGCTGGTCCGTGTGGTGGACCAGTCAGGGAACGAAGGCCCCGGATGTATTGCGGCGAGTGGG TCCAGGCATCGTCGGGATGG
Product: exopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: Polysaccharide Biosynthesis Associated Protein; Polysaccharide Export Related Protein; Polysaccharide Export Protein Translocase; MatE Family; Exopolysaccharide Biosynthesis Protein; Virulence Factor MVIN Family Protein; PST Family Polysaccharide Export Protein; Polysaccharide Biosynthesis Related Protein
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MFESINDLLAISGRSVVSVDNADSQSGLKSICKVEKQIISALSRMDKGFAKRDQRESAPVAHAGVINSHVSRKSPGPPSG VLPIATPRRNKDVGSRLARASVFALLIYIGGAGLTSLAQLAIARLIGPRDYGIYAYVLAWTSVLAYLATLGFNVSLLRFV PAYRANGRLDLARGVIRFALQRSLLAATLFGMAGAALVLFFSGQAQPDHTQRGLEISTMLGMAAVPLITAYAIGATLVRA FGGVVSALLPERIVRDGLLLILVAIMAKSGLWVVHAPQVMLAVLTSSAITVGLVFITARKFEPPGLRQALPAYEPRGWWL AVPPLMLITGLDVFVSRAGVLVLGWTDHIREAGIFALALNVAMLVGLSRIAVATMFSPTAADLHARGDQKGLQQLFARAT LLSAGGAVVVAIPMIVIAEPFLSFFGEGFDAGAPIARVLILGYVFVALCGPQQNLLAMTGNEWAAATTMIAGAMANIIAC AVGVEIYGPIGAAVGVALALAIWNVAMAVYIGKRLKILPGLVSAVLSIKASAIDAQQWNWFLRAGK
Sequences:
>Translated_546_residues MFESINDLLAISGRSVVSVDNADSQSGLKSICKVEKQIISALSRMDKGFAKRDQRESAPVAHAGVINSHVSRKSPGPPSG VLPIATPRRNKDVGSRLARASVFALLIYIGGAGLTSLAQLAIARLIGPRDYGIYAYVLAWTSVLAYLATLGFNVSLLRFV PAYRANGRLDLARGVIRFALQRSLLAATLFGMAGAALVLFFSGQAQPDHTQRGLEISTMLGMAAVPLITAYAIGATLVRA FGGVVSALLPERIVRDGLLLILVAIMAKSGLWVVHAPQVMLAVLTSSAITVGLVFITARKFEPPGLRQALPAYEPRGWWL AVPPLMLITGLDVFVSRAGVLVLGWTDHIREAGIFALALNVAMLVGLSRIAVATMFSPTAADLHARGDQKGLQQLFARAT LLSAGGAVVVAIPMIVIAEPFLSFFGEGFDAGAPIARVLILGYVFVALCGPQQNLLAMTGNEWAAATTMIAGAMANIIAC AVGVEIYGPIGAAVGVALALAIWNVAMAVYIGKRLKILPGLVSAVLSIKASAIDAQQWNWFLRAGK >Mature_546_residues MFESINDLLAISGRSVVSVDNADSQSGLKSICKVEKQIISALSRMDKGFAKRDQRESAPVAHAGVINSHVSRKSPGPPSG VLPIATPRRNKDVGSRLARASVFALLIYIGGAGLTSLAQLAIARLIGPRDYGIYAYVLAWTSVLAYLATLGFNVSLLRFV PAYRANGRLDLARGVIRFALQRSLLAATLFGMAGAALVLFFSGQAQPDHTQRGLEISTMLGMAAVPLITAYAIGATLVRA FGGVVSALLPERIVRDGLLLILVAIMAKSGLWVVHAPQVMLAVLTSSAITVGLVFITARKFEPPGLRQALPAYEPRGWWL AVPPLMLITGLDVFVSRAGVLVLGWTDHIREAGIFALALNVAMLVGLSRIAVATMFSPTAADLHARGDQKGLQQLFARAT LLSAGGAVVVAIPMIVIAEPFLSFFGEGFDAGAPIARVLILGYVFVALCGPQQNLLAMTGNEWAAATTMIAGAMANIIAC AVGVEIYGPIGAAVGVALALAIWNVAMAVYIGKRLKILPGLVSAVLSIKASAIDAQQWNWFLRAGK
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57495; Mature: 57495
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFESINDLLAISGRSVVSVDNADSQSGLKSICKVEKQIISALSRMDKGFAKRDQRESAPV CCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC AHAGVINSHVSRKSPGPPSGVLPIATPRRNKDVGSRLARASVFALLIYIGGAGLTSLAQL HHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AIARLIGPRDYGIYAYVLAWTSVLAYLATLGFNVSLLRFVPAYRANGRLDLARGVIRFAL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH QRSLLAATLFGMAGAALVLFFSGQAQPDHTQRGLEISTMLGMAAVPLITAYAIGATLVRA HHHHHHHHHHHHHHHHHHHEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FGGVVSALLPERIVRDGLLLILVAIMAKSGLWVVHAPQVMLAVLTSSAITVGLVFITARK HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHEECC FEPPGLRQALPAYEPRGWWLAVPPLMLITGLDVFVSRAGVLVLGWTDHIREAGIFALALN CCCCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH VAMLVGLSRIAVATMFSPTAADLHARGDQKGLQQLFARATLLSAGGAVVVAIPMIVIAEP HHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FLSFFGEGFDAGAPIARVLILGYVFVALCGPQQNLLAMTGNEWAAATTMIAGAMANIIAC HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH AVGVEIYGPIGAAVGVALALAIWNVAMAVYIGKRLKILPGLVSAVLSIKASAIDAQQWNW HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCE FLRAGK EEECCC >Mature Secondary Structure MFESINDLLAISGRSVVSVDNADSQSGLKSICKVEKQIISALSRMDKGFAKRDQRESAPV CCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC AHAGVINSHVSRKSPGPPSGVLPIATPRRNKDVGSRLARASVFALLIYIGGAGLTSLAQL HHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AIARLIGPRDYGIYAYVLAWTSVLAYLATLGFNVSLLRFVPAYRANGRLDLARGVIRFAL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH QRSLLAATLFGMAGAALVLFFSGQAQPDHTQRGLEISTMLGMAAVPLITAYAIGATLVRA HHHHHHHHHHHHHHHHHHHEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FGGVVSALLPERIVRDGLLLILVAIMAKSGLWVVHAPQVMLAVLTSSAITVGLVFITARK HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHEECC FEPPGLRQALPAYEPRGWWLAVPPLMLITGLDVFVSRAGVLVLGWTDHIREAGIFALALN CCCCCHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH VAMLVGLSRIAVATMFSPTAADLHARGDQKGLQQLFARATLLSAGGAVVVAIPMIVIAEP HHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FLSFFGEGFDAGAPIARVLILGYVFVALCGPQQNLLAMTGNEWAAATTMIAGAMANIIAC HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH AVGVEIYGPIGAAVGVALALAIWNVAMAVYIGKRLKILPGLVSAVLSIKASAIDAQQWNW HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCE FLRAGK EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA