| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475595
Identifier: 13475595
GI number: 13475595
Start: 5498348
End: 5498944
Strand: Reverse
Name: 13475595
Synonym: mll6703
Alternate gene names: NA
Gene position: 5498944-5498348 (Counterclockwise)
Preceding gene: 13475596
Following gene: 13475594
Centisome position: 78.15
GC content: 55.61
Gene sequence:
>597_bases ATGATGGACGCGGTGAAATTTTCCATCTCGGAGGTCATCGCTCCACCAGGGCTCATATCGACGGAACAAGGGAATATGCC GATGGGACCTGTTCAACATGACCTGGCTGGCGAGCCGACGTTTGAGCCCATGATCCAGGTCGACATGGAAATCAAGGCTT TCGTCTCCGCTTGGAGACACTGCGATTATGTTTCGACATACATGGCGCGGATGATCAGTCAAAATAGATCAGACTCGGTC CGGCATTCAAATCTCTTTTCCTCTGCCTTTAACGAACTGCTGGAAGTCGCCTTTCGTACGCGCCTTGCCGACGGCGAATT GGCATGCAGGGTGTCTCGCCATGGCGCCACGGATAGGATCGAGCTGACATTCCCTTGCCTGCCAGAGGAGCGCCAATTCT ACCAAGAGGCCCTGTCGCAAGTCGCAGGATTCGAGGCCAAGGAGCGATACCTTAACTCGGTGTCTGGGGATCTTGCGCCC AGTCGGGAGATCGTACTCCTGGAACTGGCTGTCGACTACAACGCGACACTCTGGGTCGAGGAGGCCGACGGCGATGCAAT CAAGCTTGTCGTGGATCTTCCGCTTGAGGGCCTGTAA
Upstream 100 bases:
>100_bases ACCTAGCGCCTTGCACCCTTTGTTAACGGTGAAATGGAGATTTGTAGAAACGATCGAGGCAGATACCGCACAATTCTTCG AGTCGGTGCGAGACTGACTC
Downstream 100 bases:
>100_bases AATTGGGCCCGTACGACCTTTTCCCGCGCTTCAAGGCGCAATACGACGCGAACAACCAGGAGTTCTCCATATCGGGGGTG GTCCGGCCTCAGGCAATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MMDAVKFSISEVIAPPGLISTEQGNMPMGPVQHDLAGEPTFEPMIQVDMEIKAFVSAWRHCDYVSTYMARMISQNRSDSV RHSNLFSSAFNELLEVAFRTRLADGELACRVSRHGATDRIELTFPCLPEERQFYQEALSQVAGFEAKERYLNSVSGDLAP SREIVLLELAVDYNATLWVEEADGDAIKLVVDLPLEGL
Sequences:
>Translated_198_residues MMDAVKFSISEVIAPPGLISTEQGNMPMGPVQHDLAGEPTFEPMIQVDMEIKAFVSAWRHCDYVSTYMARMISQNRSDSV RHSNLFSSAFNELLEVAFRTRLADGELACRVSRHGATDRIELTFPCLPEERQFYQEALSQVAGFEAKERYLNSVSGDLAP SREIVLLELAVDYNATLWVEEADGDAIKLVVDLPLEGL >Mature_198_residues MMDAVKFSISEVIAPPGLISTEQGNMPMGPVQHDLAGEPTFEPMIQVDMEIKAFVSAWRHCDYVSTYMARMISQNRSDSV RHSNLFSSAFNELLEVAFRTRLADGELACRVSRHGATDRIELTFPCLPEERQFYQEALSQVAGFEAKERYLNSVSGDLAP SREIVLLELAVDYNATLWVEEADGDAIKLVVDLPLEGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22102; Mature: 22102
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDAVKFSISEVIAPPGLISTEQGNMPMGPVQHDLAGEPTFEPMIQVDMEIKAFVSAWRH CCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC CDYVSTYMARMISQNRSDSVRHSNLFSSAFNELLEVAFRTRLADGELACRVSRHGATDRI CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCEE ELTFPCLPEERQFYQEALSQVAGFEAKERYLNSVSGDLAPSREIVLLELAVDYNATLWVE EEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEEE EADGDAIKLVVDLPLEGL ECCCCEEEEEEECCCCCC >Mature Secondary Structure MMDAVKFSISEVIAPPGLISTEQGNMPMGPVQHDLAGEPTFEPMIQVDMEIKAFVSAWRH CCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC CDYVSTYMARMISQNRSDSVRHSNLFSSAFNELLEVAFRTRLADGELACRVSRHGATDRI CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCEE ELTFPCLPEERQFYQEALSQVAGFEAKERYLNSVSGDLAPSREIVLLELAVDYNATLWVE EEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEEE EADGDAIKLVVDLPLEGL ECCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA