| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475576
Identifier: 13475576
GI number: 13475576
Start: 5478143
End: 5479477
Strand: Direct
Name: 13475576
Synonym: mlr6682
Alternate gene names: NA
Gene position: 5478143-5479477 (Clockwise)
Preceding gene: 13475575
Following gene: 13475577
Centisome position: 77.86
GC content: 61.87
Gene sequence:
>1335_bases ATGTTGGCGGCAATCCTGGATGGGTTGGCACAGGAGAGTCCCATGTCTGCGCGCTTGCTATCACCAACACGGCGGGAAGT CCTGATCACCGCGGCTGCCTTAGGAGCCATCAGCATGCTTTCGTCAAAATCCAAAGCGGCTGCGGAAGCCGCGTCAATCC ATCCTTTCCAGTTCAGGGCTTCCGATGAGGATCTCGCCGATCTGAAGCGGCGTGTCGCGGCGACGCGCTGGCCGGACAGG GAGACGGTGCCGGACCAGTCGCAGGGCGTGCAGCTCGACATCGCGCGCCAGATCCAGGTGCACTGGGCCAATCATGATTG GCGCAAGGTCGAGGCCAGGATGATGGCGTATCCGCACTTCATCACCGAGATCGATGGGCTCGACATCCACTTCATTCACG TGAAGTCGAAGCACAAAAACGCGCTGCCGATGATCGTGACCCATGGCTGGCCGGGCTCGGTTATCGAGCAGTTGAAGATC ATCGAACCGCTCACCGACCCGACCGCGCATGGCGGCACCGAAGCGGATGCATTCGATCTCGTGGTTCCGTCATTGCCCGG CTACGGATTCTCCGGCAAGCCGACGACACCAGGATGGGAGCCTGTCCGTATCGCCAAGGCGTGGGCAACCCTTATGGAAC GCCTCGGCTACAACAAATATGTGGCCCAGGGCGGCGACTGGGGCAATGCGGTTACCGAGAATATGGCGCTACAGGAGCCG CCGGGACTGCTTGGCATCCACACCAACATGGCGGCGACGCTTCCACCTGAAATCTCCAAGGCGCTTGGGACCGGCACGCC GCCGCCAGGGCTCGGTCCCGACGAGAAGCGCGCTTTCGACCAGCTCATCTATTTCAATCAGCATGGGCTTGGCTATGCCA TCGAGATGAACCAACGTCCTCAGACGCTCTACGGCATCGTCGACTCGCCCGTCGGCCTCGCCGCCTGGATGCTGGACCAC GACGCCGACAGTCACGCCCTGATCGCCCGCTCCTTTAGCGGGAAGCCCGAGGGCATCACGCCGGACGACTTTCTCGACAA CGTCACCTTCTACTGGCTGACGAACACGGCGGTCTCGTCGGGACGACTCTACTGGGACAATGCGCGGGTCGCGAAAGGCG GTTTCTTCGACGCGCGTGGCATCAGGATACCGGTCGCGGTGAGCGCTTTCGCCAACGAGATCTACCAGGCGCCGGAGAGC TGGGCGAAGACAGCCTATCCAAAGCTTCTCCATTACGGCCGCTTCCCCATTGGCTGCCATTTCGCCGCCTGGGAGCAGCC CGAAATCTTTGTCGAGGAGATGCGTGCGTCGTTCAAGACGCTGCGCGCGTCCTGA
Upstream 100 bases:
>100_bases ATGCGGCTGCTTGCAAAAATTCGCATCTCTTAGCGCCTCTTAACTCGCTTCGACGACAGCAGCAGGGCACTTTGGTCGTG TCACAACGAAGCAGCCGTCG
Downstream 100 bases:
>100_bases GGACTGCGACGGAAAAATAGTCTCCATTCTGAGCGCCGCCTCGGCGGTAGTCAGATGGTCAGCGTAACAGGACAAGACGA TCCCGCACCCCGGCGTGCGG
Product: epoxide hydrolase
Products: NA
Alternate protein names: Epoxide hydratase [H]
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MLAAILDGLAQESPMSARLLSPTRREVLITAAALGAISMLSSKSKAAAEAASIHPFQFRASDEDLADLKRRVAATRWPDR ETVPDQSQGVQLDIARQIQVHWANHDWRKVEARMMAYPHFITEIDGLDIHFIHVKSKHKNALPMIVTHGWPGSVIEQLKI IEPLTDPTAHGGTEADAFDLVVPSLPGYGFSGKPTTPGWEPVRIAKAWATLMERLGYNKYVAQGGDWGNAVTENMALQEP PGLLGIHTNMAATLPPEISKALGTGTPPPGLGPDEKRAFDQLIYFNQHGLGYAIEMNQRPQTLYGIVDSPVGLAAWMLDH DADSHALIARSFSGKPEGITPDDFLDNVTFYWLTNTAVSSGRLYWDNARVAKGGFFDARGIRIPVAVSAFANEIYQAPES WAKTAYPKLLHYGRFPIGCHFAAWEQPEIFVEEMRASFKTLRAS
Sequences:
>Translated_444_residues MLAAILDGLAQESPMSARLLSPTRREVLITAAALGAISMLSSKSKAAAEAASIHPFQFRASDEDLADLKRRVAATRWPDR ETVPDQSQGVQLDIARQIQVHWANHDWRKVEARMMAYPHFITEIDGLDIHFIHVKSKHKNALPMIVTHGWPGSVIEQLKI IEPLTDPTAHGGTEADAFDLVVPSLPGYGFSGKPTTPGWEPVRIAKAWATLMERLGYNKYVAQGGDWGNAVTENMALQEP PGLLGIHTNMAATLPPEISKALGTGTPPPGLGPDEKRAFDQLIYFNQHGLGYAIEMNQRPQTLYGIVDSPVGLAAWMLDH DADSHALIARSFSGKPEGITPDDFLDNVTFYWLTNTAVSSGRLYWDNARVAKGGFFDARGIRIPVAVSAFANEIYQAPES WAKTAYPKLLHYGRFPIGCHFAAWEQPEIFVEEMRASFKTLRAS >Mature_444_residues MLAAILDGLAQESPMSARLLSPTRREVLITAAALGAISMLSSKSKAAAEAASIHPFQFRASDEDLADLKRRVAATRWPDR ETVPDQSQGVQLDIARQIQVHWANHDWRKVEARMMAYPHFITEIDGLDIHFIHVKSKHKNALPMIVTHGWPGSVIEQLKI IEPLTDPTAHGGTEADAFDLVVPSLPGYGFSGKPTTPGWEPVRIAKAWATLMERLGYNKYVAQGGDWGNAVTENMALQEP PGLLGIHTNMAATLPPEISKALGTGTPPPGLGPDEKRAFDQLIYFNQHGLGYAIEMNQRPQTLYGIVDSPVGLAAWMLDH DADSHALIARSFSGKPEGITPDDFLDNVTFYWLTNTAVSSGRLYWDNARVAKGGFFDARGIRIPVAVSAFANEIYQAPES WAKTAYPKLLHYGRFPIGCHFAAWEQPEIFVEEMRASFKTLRAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
Organism=Homo sapiens, GI4503583, Length=455, Percent_Identity=33.8461538461538, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI209862837, Length=455, Percent_Identity=33.8461538461538, Blast_Score=236, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17564944, Length=418, Percent_Identity=32.7751196172249, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI193207462, Length=396, Percent_Identity=26.010101010101, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI20130139, Length=409, Percent_Identity=31.7848410757946, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24655327, Length=409, Percent_Identity=29.3398533007335, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI19922580, Length=414, Percent_Identity=27.536231884058, Blast_Score=155, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.3.2.10 [H]
Molecular weight: Translated: 48873; Mature: 48873
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAAILDGLAQESPMSARLLSPTRREVLITAAALGAISMLSSKSKAAAEAASIHPFQFRA CHHHHHHHHHCCCCCCHHHCCCCHHHHEEHHHHHHHHHHHHCCHHHHHHHHCCCCEEECC SDEDLADLKRRVAATRWPDRETVPDQSQGVQLDIARQIQVHWANHDWRKVEARMMAYPHF CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCHH ITEIDGLDIHFIHVKSKHKNALPMIVTHGWPGSVIEQLKIIEPLTDPTAHGGTEADAFDL HHHCCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE VVPSLPGYGFSGKPTTPGWEPVRIAKAWATLMERLGYNKYVAQGGDWGNAVTENMALQEP EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHCCCCCCCC PGLLGIHTNMAATLPPEISKALGTGTPPPGLGPDEKRAFDQLIYFNQHGLGYAIEMNQRP CCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECCCC QTLYGIVDSPVGLAAWMLDHDADSHALIARSFSGKPEGITPDDFLDNVTFYWLTNTAVSS CEEEEECCCCCHHEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHCCCEEEEEECCCCCC GRLYWDNARVAKGGFFDARGIRIPVAVSAFANEIYQAPESWAKTAYPKLLHYGRFPIGCH CEEEECCCEEECCCCCCCCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEE FAAWEQPEIFVEEMRASFKTLRAS ECCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLAAILDGLAQESPMSARLLSPTRREVLITAAALGAISMLSSKSKAAAEAASIHPFQFRA CHHHHHHHHHCCCCCCHHHCCCCHHHHEEHHHHHHHHHHHHCCHHHHHHHHCCCCEEECC SDEDLADLKRRVAATRWPDRETVPDQSQGVQLDIARQIQVHWANHDWRKVEARMMAYPHF CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCHH ITEIDGLDIHFIHVKSKHKNALPMIVTHGWPGSVIEQLKIIEPLTDPTAHGGTEADAFDL HHHCCCCEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE VVPSLPGYGFSGKPTTPGWEPVRIAKAWATLMERLGYNKYVAQGGDWGNAVTENMALQEP EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHCCCCCCCC PGLLGIHTNMAATLPPEISKALGTGTPPPGLGPDEKRAFDQLIYFNQHGLGYAIEMNQRP CCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECCCC QTLYGIVDSPVGLAAWMLDHDADSHALIARSFSGKPEGITPDDFLDNVTFYWLTNTAVSS CEEEEECCCCCHHEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHCCCEEEEEECCCCCC GRLYWDNARVAKGGFFDARGIRIPVAVSAFANEIYQAPESWAKTAYPKLLHYGRFPIGCH CEEEECCCEEECCCCCCCCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEE FAAWEQPEIFVEEMRASFKTLRAS ECCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226695 [H]