Click here to switch to the map view.

The map label for this gene is 13475555

Identifier: 13475555

GI number: 13475555

Start: 5452379

End: 5453878

Strand: Direct

Name: 13475555

Synonym: mlr6655

Alternate gene names: NA

Gene position: 5452379-5453878 (Clockwise)

Preceding gene: 13475554

Following gene: 13475556

Centisome position: 77.49

GC content: 60.6

Gene sequence:

>1500_bases
ATGATGGAGCACACCGCAGACATTGTCATCATCGGCTCCGGCATCGGCGGCAGCTCGCTTGCCTATAGCCTCGCCGACAC
CGGAAGACGCATCGTGATCCTGGAACGCGGGGAGCACCTCAGGGATACGCCGGAGGCGCGCGACGATATCGCCATCTTCC
AGAATGGCTTCTACAGATCGAGCGAGGAATGGCTGGCGACGGACGGCGAGAGCTTCCTGCCGGGCAATTACTACTATGTA
GGCGGCAATTCGAAGTTCTTCGGTGCAGTGATGTACCGCTACCGGCAGGAAGATTTCAATCCGCGGGATCACATGGGCGG
GCGCTCACCCGGCTGGCCGATCTCATACGCCGAACTCGAGCCATGGTATGAACGCGCGGAGATTTTGTTCGGGGTCCGTG
GCGATGCCAGGCAAGACCCGACCGAGCCGCCGCGCAATAGACCATACAGGTATCTTCCCGTTCCCGACGAACCTGCAATC
GCGACTGTGCGCCAACGGTTGCTGCAGGCAGGCATTCATCCGGCAAGCCTGCCGCTCGCCATCGATATCGACGCGTGGTT
GCGGCGGGCAAAAACAGGCTGGGACGCCTTTCCGAATACCGGCGCAGGGAAGATCGATGCGGAAGTCGGCCCGCTCACCA
AGGCGTTGGAGCACCCGAACGCCACCCTGATCACCGGCGCCAATGTTCAGCGCCTGGTAACGGACGCGTCTGGGCGGAGG
GTGATGGCTGCGGTTTTCATCAAGGATGGTGTCGAGCTCAGCATAGGCGCCGATGTCTTCGCCGTGGCTGCCGGCGCTGT
GCAAAGTGCGGCGCTGCTGCTTCGGTCGTCGACTTCGGTTTATCCGAACGGTCTTGGAAACAGCTCCGATCAGCTCGGCC
GCAACTTCATGAACCACAACACGACGGCGATGCTGGCCATCGACCCTTTTCGTCGAAACACCGCCGTCTATCAGAAAACG
CTTGGATTCAACGATTTCTACAACAAGGACCCGCTGGGCAGCTTTCCGTTAGGCAACGTACAATTGCTCGGTCACATCAC
CGGCAATATTCTCAAAGCCAACGCGCCGTTGCTGCCGCGCTGGCTGGCCGGCCTCGTTGCGCGAAACTGCTACGGCTGGT
TCCTGACCAGTGAGGATCTGCCCAATCCCGAAAGCCGTGTGACCATCCGCAACGGGCGCATCGTCATGAACTGGGTCCGC
AACAATATGGGTGCGCACGAGACATTAATCAGGCGGACGCGCGCAGTGATGCGCGAAGCCGGCTTCCCTGTTGTTCTCAC
CCGAACGTTCGGCCGCAAGACAACATCGCATCAGTGCGGCACGGCCAGGCTCGGCAGTGACCCGAACACATCTGTCGTGT
CGCCTGATTGTCGGTCGCACGACATCGCGAACCTCTATGTCACAGACGCATCTGTGCTGCCGACGTCGGCGGCAGTAAAT
CCTGCGTTGACCATAGCGGCTCTGGCTCTGAAAGCCGGAGCGGCGATCAGGGCGATGTGA

Upstream 100 bases:

>100_bases
AAGACGGTAGAGGCCCGCAAGACAGCCACCTTGTCGGTCGATACGAGCAAGATCGTCTTGTTCGACGCCCAAACCGAAGA
GCGTATCGACTGAGGGCCCG

Downstream 100 bases:

>100_bases
ACCATGGCTAATTTTGGATCCGCTCGATGGGGAATTCTGCCGCGATCCGAGACAGTCGCAGGGAAGTGCGACTACATCGT
CGTCGGTGGCGGCTCAACCG

Product: dehydrogenase subunit

Products: NA

Alternate protein names: Choline Dehydrogenase; FAD Dependent Oxidoreductase; Flavoprotein Related Choline Dehydrogenase; Dehydrogenase; Dehydrogenase Subunit-Like Protein; Glucose Dehydrogenase; Oxidoreductase; GMC Oxidoreductase; Gluconate 2-Dehydrogenase; Glucose-Methanol-Choline Family Oxidoreductase; Dehydrogenase Protein; GMC Oxidoreductase Family; Gluconate Dehydrogenase; Dehydrogenase Subunit; Dehydrogenase-Like Protein; L-Sorbose Dehydrogenase; 2-Keto-Gluconate Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase GMC Family; Glucase Dehydrogenase Subunit Alpha; Transmembrane Dehydrogenase Protein; Dehydrogenase Subunit I; Choline Dehydrogenase-Like Flavoprotein; GMC Family Oxidoreductase; Gluconate 2-Dehydrogenase Flavoprotein; Flavoproteins Oxidoreductases; N-Terminal Membrane-Anchored Dehydrogenase; Glucose Dehydrogenase Subunit Alpha; Oxidoreductase-Like Protein; Dehydrogenase Transmembrane Protein

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MMEHTADIVIIGSGIGGSSLAYSLADTGRRIVILERGEHLRDTPEARDDIAIFQNGFYRSSEEWLATDGESFLPGNYYYV
GGNSKFFGAVMYRYRQEDFNPRDHMGGRSPGWPISYAELEPWYERAEILFGVRGDARQDPTEPPRNRPYRYLPVPDEPAI
ATVRQRLLQAGIHPASLPLAIDIDAWLRRAKTGWDAFPNTGAGKIDAEVGPLTKALEHPNATLITGANVQRLVTDASGRR
VMAAVFIKDGVELSIGADVFAVAAGAVQSAALLLRSSTSVYPNGLGNSSDQLGRNFMNHNTTAMLAIDPFRRNTAVYQKT
LGFNDFYNKDPLGSFPLGNVQLLGHITGNILKANAPLLPRWLAGLVARNCYGWFLTSEDLPNPESRVTIRNGRIVMNWVR
NNMGAHETLIRRTRAVMREAGFPVVLTRTFGRKTTSHQCGTARLGSDPNTSVVSPDCRSHDIANLYVTDASVLPTSAAVN
PALTIAALALKAGAAIRAM

Sequences:

>Translated_499_residues
MMEHTADIVIIGSGIGGSSLAYSLADTGRRIVILERGEHLRDTPEARDDIAIFQNGFYRSSEEWLATDGESFLPGNYYYV
GGNSKFFGAVMYRYRQEDFNPRDHMGGRSPGWPISYAELEPWYERAEILFGVRGDARQDPTEPPRNRPYRYLPVPDEPAI
ATVRQRLLQAGIHPASLPLAIDIDAWLRRAKTGWDAFPNTGAGKIDAEVGPLTKALEHPNATLITGANVQRLVTDASGRR
VMAAVFIKDGVELSIGADVFAVAAGAVQSAALLLRSSTSVYPNGLGNSSDQLGRNFMNHNTTAMLAIDPFRRNTAVYQKT
LGFNDFYNKDPLGSFPLGNVQLLGHITGNILKANAPLLPRWLAGLVARNCYGWFLTSEDLPNPESRVTIRNGRIVMNWVR
NNMGAHETLIRRTRAVMREAGFPVVLTRTFGRKTTSHQCGTARLGSDPNTSVVSPDCRSHDIANLYVTDASVLPTSAAVN
PALTIAALALKAGAAIRAM
>Mature_499_residues
MMEHTADIVIIGSGIGGSSLAYSLADTGRRIVILERGEHLRDTPEARDDIAIFQNGFYRSSEEWLATDGESFLPGNYYYV
GGNSKFFGAVMYRYRQEDFNPRDHMGGRSPGWPISYAELEPWYERAEILFGVRGDARQDPTEPPRNRPYRYLPVPDEPAI
ATVRQRLLQAGIHPASLPLAIDIDAWLRRAKTGWDAFPNTGAGKIDAEVGPLTKALEHPNATLITGANVQRLVTDASGRR
VMAAVFIKDGVELSIGADVFAVAAGAVQSAALLLRSSTSVYPNGLGNSSDQLGRNFMNHNTTAMLAIDPFRRNTAVYQKT
LGFNDFYNKDPLGSFPLGNVQLLGHITGNILKANAPLLPRWLAGLVARNCYGWFLTSEDLPNPESRVTIRNGRIVMNWVR
NNMGAHETLIRRTRAVMREAGFPVVLTRTFGRKTTSHQCGTARLGSDPNTSVVSPDCRSHDIANLYVTDASVLPTSAAVN
PALTIAALALKAGAAIRAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54538; Mature: 54538

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00221 MIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEHTADIVIIGSGIGGSSLAYSLADTGRRIVILERGEHLRDTPEARDDIAIFQNGFYRS
CCCCCCCEEEEECCCCCCHHEEEHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCC
SEEWLATDGESFLPGNYYYVGGNSKFFGAVMYRYRQEDFNPRDHMGGRSPGWPISYAELE
CCCCEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEHHHCC
PWYERAEILFGVRGDARQDPTEPPRNRPYRYLPVPDEPAIATVRQRLLQAGIHPASLPLA
CHHHHHHEEEECCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEE
IDIDAWLRRAKTGWDAFPNTGAGKIDAEVGPLTKALEHPNATLITGANVQRLVTDASGRR
EEHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCE
VMAAVFIKDGVELSIGADVFAVAAGAVQSAALLLRSSTSVYPNGLGNSSDQLGRNFMNHN
EEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
TTAMLAIDPFRRNTAVYQKTLGFNDFYNKDPLGSFPLGNVQLLGHITGNILKANAPLLPR
CEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCHHH
WLAGLVARNCYGWFLTSEDLPNPESRVTIRNGRIVMNWVRNNMGAHETLIRRTRAVMREA
HHHHHHHHCCEEEEEECCCCCCCCCEEEEECCEEEEEEHHCCCCHHHHHHHHHHHHHHHC
GFPVVLTRTFGRKTTSHQCGTARLGSDPNTSVVSPDCRSHDIANLYVTDASVLPTSAAVN
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCC
PALTIAALALKAGAAIRAM
HHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MMEHTADIVIIGSGIGGSSLAYSLADTGRRIVILERGEHLRDTPEARDDIAIFQNGFYRS
CCCCCCCEEEEECCCCCCHHEEEHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCC
SEEWLATDGESFLPGNYYYVGGNSKFFGAVMYRYRQEDFNPRDHMGGRSPGWPISYAELE
CCCCEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEHHHCC
PWYERAEILFGVRGDARQDPTEPPRNRPYRYLPVPDEPAIATVRQRLLQAGIHPASLPLA
CHHHHHHEEEECCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEE
IDIDAWLRRAKTGWDAFPNTGAGKIDAEVGPLTKALEHPNATLITGANVQRLVTDASGRR
EEHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCE
VMAAVFIKDGVELSIGADVFAVAAGAVQSAALLLRSSTSVYPNGLGNSSDQLGRNFMNHN
EEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
TTAMLAIDPFRRNTAVYQKTLGFNDFYNKDPLGSFPLGNVQLLGHITGNILKANAPLLPR
CEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCHHH
WLAGLVARNCYGWFLTSEDLPNPESRVTIRNGRIVMNWVRNNMGAHETLIRRTRAVMREA
HHHHHHHHCCEEEEEECCCCCCCCCEEEEECCEEEEEEHHCCCCHHHHHHHHHHHHHHHC
GFPVVLTRTFGRKTTSHQCGTARLGSDPNTSVVSPDCRSHDIANLYVTDASVLPTSAAVN
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCC
PALTIAALALKAGAAIRAM
HHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA