Click here to switch to the map view.

The map label for this gene is 13475545

Identifier: 13475545

GI number: 13475545

Start: 5440845

End: 5441387

Strand: Reverse

Name: 13475545

Synonym: mll6643

Alternate gene names: NA

Gene position: 5441387-5440845 (Counterclockwise)

Preceding gene: 13475546

Following gene: 13475544

Centisome position: 77.34

GC content: 62.62

Gene sequence:

>543_bases
ATGACGCTTCCGCCGCCGCGACCCCCGGCCCTTTGCCGCGGTGTCGTCGGTCTGCCGCTCGAGACGCAGATCGATCTCAC
CGCTTCAAATCTGGCAGCGGTCGCCGACCTTGCGGCACAGTATGGGCTGCTGATCTACCTGGAGGCCCTGTCCTGGACGC
CGCTCAACACGATCGACAGGCAGCTTCGGACAATCGAGATCGCCAATCGCGACAATATCCGGCTCGTGATCGACTTCTGG
CACTGCTACACGTCCGGTGACACGCCCAAGCACATCGCCCGGCTGCACAAAGACATTATCTACGGTGTCCACATCTGCGA
TTCCCTCGCCTATGCCGGCGGCGTCCCTGACGAGAACATGCTGAGGGACGTGCCAACGGGAAACGGCGTGCTGAACCTCA
AGGAGTGGGTCGATGCGGTAAAGTCGACCGGCTATGACGGCTGGTGGAGCTGCGAGCTGTTCTGCCGGCGGCAGCATCAG
GAAAACAGCTATGACGTGGCCCGCAGCCTCAACGCGCTGATGCGGGACCTTGTCGGCGCCTGA

Upstream 100 bases:

>100_bases
GCGCTGATGCGCGAAGCCGACTGCCTGTTTCAGCTTGCCGCCAGCGCCGGCATAAAGGGCGTGCAGGTCATTACTGGCCC
GCTCAGCCTGAAAGCTCTGA

Downstream 100 bases:

>100_bases
CGACCTCATCCCCAGCTACCTGCCCCAACCGACAAGTGGAACGCCATGCACAATCTGCCAGACATCTCCTTCTTCCATCG
GCTTGCGGATGCAGCCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase Domain Protein; Xylose Isomerase; Sugar Phosphate Isomerase/Epimerase

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTLPPPRPPALCRGVVGLPLETQIDLTASNLAAVADLAAQYGLLIYLEALSWTPLNTIDRQLRTIEIANRDNIRLVIDFW
HCYTSGDTPKHIARLHKDIIYGVHICDSLAYAGGVPDENMLRDVPTGNGVLNLKEWVDAVKSTGYDGWWSCELFCRRQHQ
ENSYDVARSLNALMRDLVGA

Sequences:

>Translated_180_residues
MTLPPPRPPALCRGVVGLPLETQIDLTASNLAAVADLAAQYGLLIYLEALSWTPLNTIDRQLRTIEIANRDNIRLVIDFW
HCYTSGDTPKHIARLHKDIIYGVHICDSLAYAGGVPDENMLRDVPTGNGVLNLKEWVDAVKSTGYDGWWSCELFCRRQHQ
ENSYDVARSLNALMRDLVGA
>Mature_179_residues
TLPPPRPPALCRGVVGLPLETQIDLTASNLAAVADLAAQYGLLIYLEALSWTPLNTIDRQLRTIEIANRDNIRLVIDFWH
CYTSGDTPKHIARLHKDIIYGVHICDSLAYAGGVPDENMLRDVPTGNGVLNLKEWVDAVKSTGYDGWWSCELFCRRQHQE
NSYDVARSLNALMRDLVGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20088; Mature: 19957

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPPPRPPALCRGVVGLPLETQIDLTASNLAAVADLAAQYGLLIYLEALSWTPLNTIDR
CCCCCCCCHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHCHHEEEEHHCCCCHHHHHH
QLRTIEIANRDNIRLVIDFWHCYTSGDTPKHIARLHKDIIYGVHICDSLAYAGGVPDENM
HHHEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LRDVPTGNGVLNLKEWVDAVKSTGYDGWWSCELFCRRQHQENSYDVARSLNALMRDLVGA
HHCCCCCCCEEEHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLPPPRPPALCRGVVGLPLETQIDLTASNLAAVADLAAQYGLLIYLEALSWTPLNTIDR
CCCCCCCHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHCHHEEEEHHCCCCHHHHHH
QLRTIEIANRDNIRLVIDFWHCYTSGDTPKHIARLHKDIIYGVHICDSLAYAGGVPDENM
HHHEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LRDVPTGNGVLNLKEWVDAVKSTGYDGWWSCELFCRRQHQENSYDVARSLNALMRDLVGA
HHCCCCCCCEEEHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA