| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475526
Identifier: 13475526
GI number: 13475526
Start: 5422059
End: 5422901
Strand: Reverse
Name: 13475526
Synonym: mll6621
Alternate gene names: NA
Gene position: 5422901-5422059 (Counterclockwise)
Preceding gene: 13475528
Following gene: 13475525
Centisome position: 77.07
GC content: 63.11
Gene sequence:
>843_bases GTGGGATATTGCCTCCGAGGCGGACCAGATGGACCGCCCTGCGAGATTTCAACGTGGAAACACAATTCGATGAAACAGAT TGCACTGTCGCTTTTCGTGATCGCTGCCTCCGGCGCCTATGTCTGGGATCAGGCCGGCAAGAATCCGGCAAACGATATGC TTGGGGAAGCGCTGCCGGCCGACGCAGCCGAAGCCCCTACCGTGCAGCCGAAAGAGCCCGCATCCGCTGCGGCTTTGCCG GTGCTCCGCACCTCGCCGGCGCCCCTCGATCCCCGCTTCAGAACAAGGCTCCCGATTGCCCGGGAAACGACGGCTGGCAT AGCCGTACCCGCCGAACGGCCAAATGATCCAGTCAAACAGACAGTGGTTCCAGTGGCACCACAACCGTCGCCAGCGCCGC CGGCGCAGCCAGTGACACCGGCTGTCACCGATCCTGCGTCGTCAACGCCTTCATTCGCCGTAACGCCCGCCATCTACATA CCAGTCCCGCAGCCGAGGCCGGCATATCCGAATGCACCTGTACGTGTCGTCCGGGTGGGCATGAAGCCCGCCGCACATGG CTATGCCGATGGCGTCTACACCGGCCCCACGGCCGATGCCTACTACGGCATCATCCAGATTCAGGCCCTCGTACAGGGCG GGCAGCTTACGGCGCTGAAAGTGCTGAAATATCCCTCCGATCGCCGCACCTCCGTCAACATCAACAGGCAGGCGCTGCCC ATGCTGCGCGACGAAGCGATCAGCGCCCAGAGCGCCGATGTCGATATTATTTCGGGCGCGACGCTGACCAGCAGGGCTTT CATCCAGTCGCTGCGCGGCGCGCTGAAGAAAGCGTCGTCGTAG
Upstream 100 bases:
>100_bases CGAGAATCTTGATTTAGGACAAATCGATTTGCTGTCTACCCTTAAGCTTCACGGGCTCTCGCAGCTTGAGCTCGGCTGAC AGCCAGTTGTCAGCTTGCTC
Downstream 100 bases:
>100_bases GTCCATGCGCGACACGCGAATTTTGATGGGCATGCCCATCACAGTCGACATCGGTGGCACGTCGACCGATGATCTGATCG ACACGGTCTTCGGCTATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MGYCLRGGPDGPPCEISTWKHNSMKQIALSLFVIAASGAYVWDQAGKNPANDMLGEALPADAAEAPTVQPKEPASAAALP VLRTSPAPLDPRFRTRLPIARETTAGIAVPAERPNDPVKQTVVPVAPQPSPAPPAQPVTPAVTDPASSTPSFAVTPAIYI PVPQPRPAYPNAPVRVVRVGMKPAAHGYADGVYTGPTADAYYGIIQIQALVQGGQLTALKVLKYPSDRRTSVNINRQALP MLRDEAISAQSADVDIISGATLTSRAFIQSLRGALKKASS
Sequences:
>Translated_280_residues MGYCLRGGPDGPPCEISTWKHNSMKQIALSLFVIAASGAYVWDQAGKNPANDMLGEALPADAAEAPTVQPKEPASAAALP VLRTSPAPLDPRFRTRLPIARETTAGIAVPAERPNDPVKQTVVPVAPQPSPAPPAQPVTPAVTDPASSTPSFAVTPAIYI PVPQPRPAYPNAPVRVVRVGMKPAAHGYADGVYTGPTADAYYGIIQIQALVQGGQLTALKVLKYPSDRRTSVNINRQALP MLRDEAISAQSADVDIISGATLTSRAFIQSLRGALKKASS >Mature_279_residues GYCLRGGPDGPPCEISTWKHNSMKQIALSLFVIAASGAYVWDQAGKNPANDMLGEALPADAAEAPTVQPKEPASAAALPV LRTSPAPLDPRFRTRLPIARETTAGIAVPAERPNDPVKQTVVPVAPQPSPAPPAQPVTPAVTDPASSTPSFAVTPAIYIP VPQPRPAYPNAPVRVVRVGMKPAAHGYADGVYTGPTADAYYGIIQIQALVQGGQLTALKVLKYPSDRRTSVNINRQALPM LRDEAISAQSADVDIISGATLTSRAFIQSLRGALKKASS
Specific function: Unknown
COG id: COG3976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29337; Mature: 29206
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYCLRGGPDGPPCEISTWKHNSMKQIALSLFVIAASGAYVWDQAGKNPANDMLGEALPA CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCC DAAEAPTVQPKEPASAAALPVLRTSPAPLDPRFRTRLPIARETTAGIAVPAERPNDPVKQ CCCCCCCCCCCCCCCHHHCCEEECCCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCHHH TVVPVAPQPSPAPPAQPVTPAVTDPASSTPSFAVTPAIYIPVPQPRPAYPNAPVRVVRVG CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCEEEEEEC MKPAAHGYADGVYTGPTADAYYGIIQIQALVQGGQLTALKVLKYPSDRRTSVNINRQALP CCCCCCCCCCCCCCCCCCHHHHHHEEEEEHHCCCCEEEEEEEECCCCCCEEEECCHHHHH MLRDEAISAQSADVDIISGATLTSRAFIQSLRGALKKASS HHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GYCLRGGPDGPPCEISTWKHNSMKQIALSLFVIAASGAYVWDQAGKNPANDMLGEALPA CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCC DAAEAPTVQPKEPASAAALPVLRTSPAPLDPRFRTRLPIARETTAGIAVPAERPNDPVKQ CCCCCCCCCCCCCCCHHHCCEEECCCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCHHH TVVPVAPQPSPAPPAQPVTPAVTDPASSTPSFAVTPAIYIPVPQPRPAYPNAPVRVVRVG CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCEEEEEEC MKPAAHGYADGVYTGPTADAYYGIIQIQALVQGGQLTALKVLKYPSDRRTSVNINRQALP CCCCCCCCCCCCCCCCCCHHHHHHEEEEEHHCCCCEEEEEEEECCCCCCEEEECCHHHHH MLRDEAISAQSADVDIISGATLTSRAFIQSLRGALKKASS HHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA