| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475500
Identifier: 13475500
GI number: 13475500
Start: 5394350
End: 5394736
Strand: Reverse
Name: 13475500
Synonym: mll6587
Alternate gene names: NA
Gene position: 5394736-5394350 (Counterclockwise)
Preceding gene: 13475501
Following gene: 13475499
Centisome position: 76.67
GC content: 61.24
Gene sequence:
>387_bases ATGACCAGTTTGAAGGACCTCACCCCGAAATTCCGCAATGTCCGGCTGCTGCTGGCACGTGAAAAGGGCCACCCGGAAGG CGACCGCGAAGAAGGCTATGACGTGCTGGCTCCATTGACCGGAGAAGGAAAGATCGATGCGGAAGAATGGAAGTCGCACA GGGCCTCCTGCCGTGTTCGCCGGTTTCGCACCGGCGAGGAGGATCTGATCGGCCGGCTGAGGCGCAAACCCGGCGGACAG TGGTATTTCGACTATGCCGAAGGCGATCGCGATGACGAGATCGGCTTCCATCTCGGCGACGAACGGTTCGTGACCGGTGA GTACGTGTCGATCGAGCGCAACGGCGCCATGCACACCTACCAGGTGGCACGGGTCGAACGGCCTTGA
Upstream 100 bases:
>100_bases CTCGGTCCTGGATAGGAGTGCTGTTCTCGAGCCTTGATTGACGCGGATCAAGGGCCAGTTCCCGCCTCCGCTCTATGAGA CTCCGTGAAAGGAGTTCGCC
Downstream 100 bases:
>100_bases CGCCTCGGGGCCAGGCTCCCTGGGAGTAGACCATGTCGCGACGCATTCTCATTGTGGTCGGCCATCCCGACCCGTCGCCG GACAGGCTCTGCCGCGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTSLKDLTPKFRNVRLLLAREKGHPEGDREEGYDVLAPLTGEGKIDAEEWKSHRASCRVRRFRTGEEDLIGRLRRKPGGQ WYFDYAEGDRDDEIGFHLGDERFVTGEYVSIERNGAMHTYQVARVERP
Sequences:
>Translated_128_residues MTSLKDLTPKFRNVRLLLAREKGHPEGDREEGYDVLAPLTGEGKIDAEEWKSHRASCRVRRFRTGEEDLIGRLRRKPGGQ WYFDYAEGDRDDEIGFHLGDERFVTGEYVSIERNGAMHTYQVARVERP >Mature_127_residues TSLKDLTPKFRNVRLLLAREKGHPEGDREEGYDVLAPLTGEGKIDAEEWKSHRASCRVRRFRTGEEDLIGRLRRKPGGQW YFDYAEGDRDDEIGFHLGDERFVTGEYVSIERNGAMHTYQVARVERP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14868; Mature: 14737
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLKDLTPKFRNVRLLLAREKGHPEGDREEGYDVLAPLTGEGKIDAEEWKSHRASCRVR CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH RFRTGEEDLIGRLRRKPGGQWYFDYAEGDRDDEIGFHLGDERFVTGEYVSIERNGAMHTY HCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCCEEECCCEEEEECCCCEEEE QVARVERP EEEEECCC >Mature Secondary Structure TSLKDLTPKFRNVRLLLAREKGHPEGDREEGYDVLAPLTGEGKIDAEEWKSHRASCRVR CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH RFRTGEEDLIGRLRRKPGGQWYFDYAEGDRDDEIGFHLGDERFVTGEYVSIERNGAMHTY HCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCCEEECCCEEEEECCCCEEEE QVARVERP EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA