| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13475496
Identifier: 13475496
GI number: 13475496
Start: 5392168
End: 5392620
Strand: Direct
Name: 13475496
Synonym: mlr6581
Alternate gene names: NA
Gene position: 5392168-5392620 (Clockwise)
Preceding gene: 13475495
Following gene: 13475498
Centisome position: 76.64
GC content: 58.94
Gene sequence:
>453_bases ATGAACGAAGAGGTCAAAAACAAGATCCTGATGCTGCTGGATCAACACCGCATCATGACAATTGCAACGCTGAGGCCGGA CGGCTGGCCACAGGCGACGACCGTCGGCTACGTGAACGAAGGCCTTACCCTCTACTTCCTCTGCGGTCTGGATAGCCAGA AGGCCGCGAATCTGGCTCGAGACAATCGCGTGTCCCTGACCATCGATCACGACACCCCACAGGTGATGGAAATCACCGGA CTTTCCATGGCGGCGCGCGCGCAGGTGGTGGCAAACCGGGCCGAAGCGGAAAAGGTCCTGCGGATGCTGCCGTTGAAGTA TCCGGAGCAAGTCGCGCTGCCTGGTCCGATGCCGACTCCGGAGCAGGTGCGCATATTCCGCGTTATGCCTACTGTCATCT CCGTGCTCGACTACTCTAAGGGATTTGGCCACACCGATCTCGTCACCTGCTGA
Upstream 100 bases:
>100_bases TGTCCTGAAACCAGGGATGATTTGCGTTGATGTAGGTCAATGCTAGGCGACTACGGTCAAACTATCGTCACGGTCAGCAA TATGTCTTTGGAGACCGCCG
Downstream 100 bases:
>100_bases GCGCGCTCCTTGCCACGACATGCATTGGATTACGCGGGAACGAGGCCGCCAAATTGTCGGCAAAGTTTGTGCAATCAGAT CTGGCGGCTGGCACATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MNEEVKNKILMLLDQHRIMTIATLRPDGWPQATTVGYVNEGLTLYFLCGLDSQKAANLARDNRVSLTIDHDTPQVMEITG LSMAARAQVVANRAEAEKVLRMLPLKYPEQVALPGPMPTPEQVRIFRVMPTVISVLDYSKGFGHTDLVTC
Sequences:
>Translated_150_residues MNEEVKNKILMLLDQHRIMTIATLRPDGWPQATTVGYVNEGLTLYFLCGLDSQKAANLARDNRVSLTIDHDTPQVMEITG LSMAARAQVVANRAEAEKVLRMLPLKYPEQVALPGPMPTPEQVRIFRVMPTVISVLDYSKGFGHTDLVTC >Mature_150_residues MNEEVKNKILMLLDQHRIMTIATLRPDGWPQATTVGYVNEGLTLYFLCGLDSQKAANLARDNRVSLTIDHDTPQVMEITG LSMAARAQVVANRAEAEKVLRMLPLKYPEQVALPGPMPTPEQVRIFRVMPTVISVLDYSKGFGHTDLVTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16709; Mature: 16709
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEEVKNKILMLLDQHRIMTIATLRPDGWPQATTVGYVNEGLTLYFLCGLDSQKAANLAR CCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHCC DNRVSLTIDHDTPQVMEITGLSMAARAQVVANRAEAEKVLRMLPLKYPEQVALPGPMPTP CCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCH EQVRIFRVMPTVISVLDYSKGFGHTDLVTC HHEEEEHHHHHHHHHHHHCCCCCCCCEECC >Mature Secondary Structure MNEEVKNKILMLLDQHRIMTIATLRPDGWPQATTVGYVNEGLTLYFLCGLDSQKAANLAR CCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHCC DNRVSLTIDHDTPQVMEITGLSMAARAQVVANRAEAEKVLRMLPLKYPEQVALPGPMPTP CCEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCH EQVRIFRVMPTVISVLDYSKGFGHTDLVTC HHEEEEHHHHHHHHHHHHCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA