| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is ordL [H]
Identifier: 13475448
GI number: 13475448
Start: 5328428
End: 5329714
Strand: Reverse
Name: ordL [H]
Synonym: mll6520
Alternate gene names: 13475448
Gene position: 5329714-5328428 (Counterclockwise)
Preceding gene: 13475449
Following gene: 13475447
Centisome position: 75.75
GC content: 62.86
Gene sequence:
>1287_bases ATGCCCTATCAATCTCCGATTTCTCCCGGCCGCTCTTGGTATGAAGACACGGCGGGACCTAGACCAGAGTATCCGGCACT CGACGGCGACCGGAGTTGCGATGTCGTCATCATCGGCGGCGGCTTTACTGGGCTGTCGGCGGCCGCCCATCTAGCCAAGG CGGGGACCGATGTCGTCCTGGTCGAAGCCTACCGTTTCGGTGACGGCGCATCGGGCCGCAATGGCGGCCAGCTTGGCACC GGCCAGCGCGCCTGGGCAGAAGATCTGGAGGCCGAATACGGGCTGTCCCGCGCCAAGGCACTGTTCGATCTCGCCGAGGA GGCGAAGACGCATCTCATCGAATTCGCCGCCTCCAACCAGATCGATATCGACTACATGCCGGGCCAGCTCTCGGTCGCGC ACAAGCCGCGCTATGTCGACGACTACAAGGCGCATGCCGAGATCATGGGCAGCCGTTTCTCCTATCCGCACATCTCCTTC ATGGATGCGAAGGAGACGGCGGAGCGGCTCGGCTCGACCGCCTATTTCGGCGGCACGCGCGACACCGGCACCGGCCATAT CCATCCGATGAAGCTGGTGATCGGCACGGCGCGTGTGGCGGCGCAGGCCGGTGCGCAGCTGTTTGAAAAAACGCCATCGA CCGGCATCGTTGCCGCTGGCGGCAAGGTCAGGGTTTCCACGCCAAGAGGTACCGTGACGGCACAGAAATGCCTGATCGCG GTCAACGCCTATGGCGGCACGCTCGAACCGGTGAGTGCCGCACACATCATGCCGATCGGCTCCTTCATCGGTGCGACCGT GCCTTTGGGGGCGGATTCGAAAGTGCTGCCCGGCGGCGAGTCCGTCGATGATTCCCGCTTCGTGGTGCGCTATTTCCGCA AATCGAGGGATGGCCGGCTGTTGTTCGGCGGACGAGAGGTCTATGGCGTCAACGACCCGAAAGACATCCACATCCACATT CGCCGCCAGATCGCGGAGCTCTATCCGGCGCTGAAAGGTATCGAGATCACCCATGGCTGGGGCGGCTATGTCGGCATCAC CGTGCCGAGGAAACCGTTCGTGCGCGAAGTGATGCCGAATGTGATCGCGGCGGGCGGCTATTCCGGCCACGGCGTCATGC TGTCGAACTTCTTCGGCAAGCTCTATGCCGAGACCGTTGCCGGCAATCGCGACCGGCTGAAACTGATCGAGGATTTGAAA ATTCCGCCATTTCCCGGCGGCCGCCGTTTCCGTACGCCGCTGCTTTTCCTGGCGCTCAACTGGTTCGCGCTGCGCGATAG GATCTAG
Upstream 100 bases:
>100_bases TTGAATGGTGAGTAGCTTCATACTGGATGGATGAGCGCAGACGGCGCGCTTTCTCGCGGCCATTCACCATCCACACCATT CACCATTCATTGGCGTTCCC
Downstream 100 bases:
>100_bases TGCATGTCGTCCAAAAGTGACCTTCGGTCAGGGGAAGCGACATAGGCCTGAAGTGCGTCGCATGGACCCGTTTCGAGGTG ACGCGCCTCGTGCTGGATCC
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MPYQSPISPGRSWYEDTAGPRPEYPALDGDRSCDVVIIGGGFTGLSAAAHLAKAGTDVVLVEAYRFGDGASGRNGGQLGT GQRAWAEDLEAEYGLSRAKALFDLAEEAKTHLIEFAASNQIDIDYMPGQLSVAHKPRYVDDYKAHAEIMGSRFSYPHISF MDAKETAERLGSTAYFGGTRDTGTGHIHPMKLVIGTARVAAQAGAQLFEKTPSTGIVAAGGKVRVSTPRGTVTAQKCLIA VNAYGGTLEPVSAAHIMPIGSFIGATVPLGADSKVLPGGESVDDSRFVVRYFRKSRDGRLLFGGREVYGVNDPKDIHIHI RRQIAELYPALKGIEITHGWGGYVGITVPRKPFVREVMPNVIAAGGYSGHGVMLSNFFGKLYAETVAGNRDRLKLIEDLK IPPFPGGRRFRTPLLFLALNWFALRDRI
Sequences:
>Translated_428_residues MPYQSPISPGRSWYEDTAGPRPEYPALDGDRSCDVVIIGGGFTGLSAAAHLAKAGTDVVLVEAYRFGDGASGRNGGQLGT GQRAWAEDLEAEYGLSRAKALFDLAEEAKTHLIEFAASNQIDIDYMPGQLSVAHKPRYVDDYKAHAEIMGSRFSYPHISF MDAKETAERLGSTAYFGGTRDTGTGHIHPMKLVIGTARVAAQAGAQLFEKTPSTGIVAAGGKVRVSTPRGTVTAQKCLIA VNAYGGTLEPVSAAHIMPIGSFIGATVPLGADSKVLPGGESVDDSRFVVRYFRKSRDGRLLFGGREVYGVNDPKDIHIHI RRQIAELYPALKGIEITHGWGGYVGITVPRKPFVREVMPNVIAAGGYSGHGVMLSNFFGKLYAETVAGNRDRLKLIEDLK IPPFPGGRRFRTPLLFLALNWFALRDRI >Mature_427_residues PYQSPISPGRSWYEDTAGPRPEYPALDGDRSCDVVIIGGGFTGLSAAAHLAKAGTDVVLVEAYRFGDGASGRNGGQLGTG QRAWAEDLEAEYGLSRAKALFDLAEEAKTHLIEFAASNQIDIDYMPGQLSVAHKPRYVDDYKAHAEIMGSRFSYPHISFM DAKETAERLGSTAYFGGTRDTGTGHIHPMKLVIGTARVAAQAGAQLFEKTPSTGIVAAGGKVRVSTPRGTVTAQKCLIAV NAYGGTLEPVSAAHIMPIGSFIGATVPLGADSKVLPGGESVDDSRFVVRYFRKSRDGRLLFGGREVYGVNDPKDIHIHIR RQIAELYPALKGIEITHGWGGYVGITVPRKPFVREVMPNVIAAGGYSGHGVMLSNFFGKLYAETVAGNRDRLKLIEDLKI PPFPGGRRFRTPLLFLALNWFALRDRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=420, Percent_Identity=35.7142857142857, Blast_Score=254, Evalue=9e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46195; Mature: 46064
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYQSPISPGRSWYEDTAGPRPEYPALDGDRSCDVVIIGGGFTGLSAAAHLAKAGTDVVL CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEE VEAYRFGDGASGRNGGQLGTGQRAWAEDLEAEYGLSRAKALFDLAEEAKTHLIEFAASNQ EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC IDIDYMPGQLSVAHKPRYVDDYKAHAEIMGSRFSYPHISFMDAKETAERLGSTAYFGGTR EEEEECCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCEEEECCCC DTGTGHIHPMKLVIGTARVAAQAGAQLFEKTPSTGIVAAGGKVRVSTPRGTVTAQKCLIA CCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCEEEEEEEEE VNAYGGTLEPVSAAHIMPIGSFIGATVPLGADSKVLPGGESVDDSRFVVRYFRKSRDGRL EECCCCCCCCCCCHHHEEHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEE LFGGREVYGVNDPKDIHIHIRRQIAELYPALKGIEITHGWGGYVGITVPRKPFVREVMPN EECCEEEECCCCCCEEEEHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCHHHHHHHHH VIAAGGYSGHGVMLSNFFGKLYAETVAGNRDRLKLIEDLKIPPFPGGRRFRTPLLFLALN HEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH WFALRDRI HHHHHCCC >Mature Secondary Structure PYQSPISPGRSWYEDTAGPRPEYPALDGDRSCDVVIIGGGFTGLSAAAHLAKAGTDVVL CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEE VEAYRFGDGASGRNGGQLGTGQRAWAEDLEAEYGLSRAKALFDLAEEAKTHLIEFAASNQ EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC IDIDYMPGQLSVAHKPRYVDDYKAHAEIMGSRFSYPHISFMDAKETAERLGSTAYFGGTR EEEEECCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCEEEECCCC DTGTGHIHPMKLVIGTARVAAQAGAQLFEKTPSTGIVAAGGKVRVSTPRGTVTAQKCLIA CCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCEEEEEEEEE VNAYGGTLEPVSAAHIMPIGSFIGATVPLGADSKVLPGGESVDDSRFVVRYFRKSRDGRL EECCCCCCCCCCCHHHEEHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEE LFGGREVYGVNDPKDIHIHIRRQIAELYPALKGIEITHGWGGYVGITVPRKPFVREVMPN EECCEEEECCCCCCEEEEHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCHHHHHHHHH VIAAGGYSGHGVMLSNFFGKLYAETVAGNRDRLKLIEDLKIPPFPGGRRFRTPLLFLALN HEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH WFALRDRI HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430; 10400573 [H]