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The map label for this gene is oppC [H]

Identifier: 13475392

GI number: 13475392

Start: 5269260

End: 5270399

Strand: Direct

Name: oppC [H]

Synonym: mlr6447

Alternate gene names: 13475392

Gene position: 5269260-5270399 (Clockwise)

Preceding gene: 13475391

Following gene: 13475393

Centisome position: 74.89

GC content: 64.91

Gene sequence:

>1140_bases
ATGCTGGCCCGCGATCCATCACCGCCGCCGCTGCCCGCCGAAGGGCCCATCGTCGCCAAGCCGGCCCGCGGCAATGAAAG
CTACATCGCGCTCGTCTGGCGCCGGCTGAAGCGCTCCTGGACCGGCATGGCCGGGCTCTGGCTCGTCGTGCTGCTGCTGG
TGATGGCCGTGTTCGCCGAATTCCTGGCGCCGATGGACCCGAAGGCGACCGATGTCGGCTTCGCGCCGCCGCAACTGCCC
TCCTTCCACGATAGGGACGGCAATTTCGTCGCGAGGCCGCGGGTCTATGCGCTGGCCGATTCGGCCGACCTCGATCCTGT
CACCTTCCAGCCCATTGTCGGCCCCGACTACGACCATCCAAGGCTGCTCGGCTTCTTTACCGAGGGCGCGCCCTACAAGC
TCTTCGGGCTGATCCCGGCGAACCGGCATTTCTTCGCCTCGATGGACGGCCAGCCGGTGCATTTCCTAGGCACCGACAAA
TTCGGCCGTGATGTGCTGTCGCGCGCCATACATGGCTCACGGGTCTCGCTGATGATCGCGCTGACGGTCGTCTTCATCAT
CACCGTCATCGGCACCACCGTCGGCATGGTTTCCGGCTATTTCGGCGGCCGGTTCGATATCTGGACGCAGCGCTTCGTCG
AACTGGTGCTCGCTTTTCCGCAGCTGCCGCTCTATCTGGCGCTGACGACGCTGATCCCCGTCACCGCGCCGACCAATGTC
TTTCTCGCCTTCGTCATCATCGTCATGTCGGCGCTGGGCTGGGCGCAGATGTCGCGCGAGGTGCGCGGCAAGACGTTGGC
GCTGGCGCGCATCGAATATGTGCGCGCCGCCATGGCGGTCGGCGCCACCGACCGGCGCATCATCCTGCAGCACATCTTGC
CCAATGTGATGAGCCACGTGATCGTTGCCGTCACCTTGGCGATCCCGACGGTGGTGCTGCTCGAATGCTTCCTCGGGTTC
CTCGGCTTCGCGGTCAAGCCGCCGCTGATCTCCTGGGGTCTGATGCTGCAGGACACCGCGACCTATTCCGTCATCGGCAC
CTATCCCTGGATACTGTCGCCAGTCGGTTTCGTGCTCGCCACCGTCTTTGCCTTCAACGCGCTGGGCGACGGCCTGCGCG
ATGCCGTCGATCCGTATTGA

Upstream 100 bases:

>100_bases
CATGATGGTGCTGGCGGCGACGCTGATCGTCGGCAACATCATCGCCGACATGCTGCTCGTCCTGCTCGACCCGCGCATCC
GCCAATACGGAGAGAGCTAG

Downstream 100 bases:

>100_bases
GGTGGCTGGGATGACCGTCGTACTCGCCGAGTCCTTCGCGCCCATCGTTCGTCATGACCATGACGGGCGCCAGGACCAGC
CCATCATCGACGCCCGCAAC

Product: ABC transporter, permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MLARDPSPPPLPAEGPIVAKPARGNESYIALVWRRLKRSWTGMAGLWLVVLLLVMAVFAEFLAPMDPKATDVGFAPPQLP
SFHDRDGNFVARPRVYALADSADLDPVTFQPIVGPDYDHPRLLGFFTEGAPYKLFGLIPANRHFFASMDGQPVHFLGTDK
FGRDVLSRAIHGSRVSLMIALTVVFIITVIGTTVGMVSGYFGGRFDIWTQRFVELVLAFPQLPLYLALTTLIPVTAPTNV
FLAFVIIVMSALGWAQMSREVRGKTLALARIEYVRAAMAVGATDRRIILQHILPNVMSHVIVAVTLAIPTVVLLECFLGF
LGFAVKPPLISWGLMLQDTATYSVIGTYPWILSPVGFVLATVFAFNALGDGLRDAVDPY

Sequences:

>Translated_379_residues
MLARDPSPPPLPAEGPIVAKPARGNESYIALVWRRLKRSWTGMAGLWLVVLLLVMAVFAEFLAPMDPKATDVGFAPPQLP
SFHDRDGNFVARPRVYALADSADLDPVTFQPIVGPDYDHPRLLGFFTEGAPYKLFGLIPANRHFFASMDGQPVHFLGTDK
FGRDVLSRAIHGSRVSLMIALTVVFIITVIGTTVGMVSGYFGGRFDIWTQRFVELVLAFPQLPLYLALTTLIPVTAPTNV
FLAFVIIVMSALGWAQMSREVRGKTLALARIEYVRAAMAVGATDRRIILQHILPNVMSHVIVAVTLAIPTVVLLECFLGF
LGFAVKPPLISWGLMLQDTATYSVIGTYPWILSPVGFVLATVFAFNALGDGLRDAVDPY
>Mature_379_residues
MLARDPSPPPLPAEGPIVAKPARGNESYIALVWRRLKRSWTGMAGLWLVVLLLVMAVFAEFLAPMDPKATDVGFAPPQLP
SFHDRDGNFVARPRVYALADSADLDPVTFQPIVGPDYDHPRLLGFFTEGAPYKLFGLIPANRHFFASMDGQPVHFLGTDK
FGRDVLSRAIHGSRVSLMIALTVVFIITVIGTTVGMVSGYFGGRFDIWTQRFVELVLAFPQLPLYLALTTLIPVTAPTNV
FLAFVIIVMSALGWAQMSREVRGKTLALARIEYVRAAMAVGATDRRIILQHILPNVMSHVIVAVTLAIPTVVLLECFLGF
LGFAVKPPLISWGLMLQDTATYSVIGTYPWILSPVGFVLATVFAFNALGDGLRDAVDPY

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=231, Percent_Identity=41.1255411255411, Blast_Score=154, Evalue=9e-39,
Organism=Escherichia coli, GI1787054, Length=225, Percent_Identity=36.4444444444444, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1787760, Length=227, Percent_Identity=34.8017621145374, Blast_Score=125, Evalue=6e-30,
Organism=Escherichia coli, GI1788505, Length=359, Percent_Identity=29.2479108635098, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1789964, Length=231, Percent_Identity=36.7965367965368, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1789889, Length=227, Percent_Identity=33.920704845815, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1787549, Length=228, Percent_Identity=28.0701754385965, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 41466; Mature: 41466

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLARDPSPPPLPAEGPIVAKPARGNESYIALVWRRLKRSWTGMAGLWLVVLLLVMAVFAE
CCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FLAPMDPKATDVGFAPPQLPSFHDRDGNFVARPRVYALADSADLDPVTFQPIVGPDYDHP
HHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEECCCCCCCCCCC
RLLGFFTEGAPYKLFGLIPANRHFFASMDGQPVHFLGTDKFGRDVLSRAIHGSRVSLMIA
CEEEEECCCCCEEEEEECCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHH
LTVVFIITVIGTTVGMVSGYFGGRFDIWTQRFVELVLAFPQLPLYLALTTLIPVTAPTNV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHH
FLAFVIIVMSALGWAQMSREVRGKTLALARIEYVRAAMAVGATDRRIILQHILPNVMSHV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IVAVTLAIPTVVLLECFLGFLGFAVKPPLISWGLMLQDTATYSVIGTYPWILSPVGFVLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCEEEEECCHHHHHHHHHHHH
TVFAFNALGDGLRDAVDPY
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLARDPSPPPLPAEGPIVAKPARGNESYIALVWRRLKRSWTGMAGLWLVVLLLVMAVFAE
CCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FLAPMDPKATDVGFAPPQLPSFHDRDGNFVARPRVYALADSADLDPVTFQPIVGPDYDHP
HHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEECCCCCCCCCCC
RLLGFFTEGAPYKLFGLIPANRHFFASMDGQPVHFLGTDKFGRDVLSRAIHGSRVSLMIA
CEEEEECCCCCEEEEEECCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHH
LTVVFIITVIGTTVGMVSGYFGGRFDIWTQRFVELVLAFPQLPLYLALTTLIPVTAPTNV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHH
FLAFVIIVMSALGWAQMSREVRGKTLALARIEYVRAAMAVGATDRRIILQHILPNVMSHV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IVAVTLAIPTVVLLECFLGFLGFAVKPPLISWGLMLQDTATYSVIGTYPWILSPVGFVLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEECCCCEEEEECCHHHHHHHHHHHH
TVFAFNALGDGLRDAVDPY
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]