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The map label for this gene is fixN [H]

Identifier: 13475364

GI number: 13475364

Start: 5233397

End: 5235007

Strand: Direct

Name: fixN [H]

Synonym: mlr6411

Alternate gene names: 13475364

Gene position: 5233397-5235007 (Clockwise)

Preceding gene: 13475362

Following gene: 13475365

Centisome position: 74.38

GC content: 60.02

Gene sequence:

>1611_bases
ATGAAATTCGGCACGGAGATCGTCGTTCTAAGCCTGTTTGCTTTTGCGGCCCTGGTGGCTGCCGGCTTCGGCGTAGAAGG
ACCTTTTCGCCAGCATATGGGGGTTTTGTTCGTCGCCGTGGCTGGCTTTACCGCGATCCTGCTGCGCAACACAGATTTCA
AGCCGGCGGCTCCGGTCGACACCTCCGCCTACATGGATGGCCCAATCCGCTACGGAGCCATTGCAACGGTATTCTGGGGC
GTCGTCGGCATGCTCGTCGGTGTGATCATTGCCCTGCAGCTGGCATACCCTCACCTCAACATCCAACCCTGGTTCAATTT
CGGCCGGCTGCGGCCGCTGCACACATCCGGCGTCGTCTTTGCTTTCGGCGGCAACGCTTTGCTTTGCACGTCTCTCTATG
TCGTGCAGCGCACGTGCCGCGCCCGGCTGTTTGGCGGCAAACTGGCCTGGTTTGTGTTCTGGGGTTACCAGCTGTTCATC
GTCATGGCCGCGACCGGCTACCTGCTCGGCATCACCGAGAGCCGCGAATACGCGGAACCCGAATGGTATGTGGACATCTG
GCTTACCATCGTCTGGGTCGCCTATCTCATCCTGTTCCTCGGCACGATCCTGAAGCGCAAGGAGCCGCATATCTACGTCG
CCAACTGGTTCTACCTGTCCTTCATCGTGACCATCGCGATGTTGCATGTGATCAACAACCTGTCGATGCCGGCCTCCTTC
CTCGGCTCGAAGAGCTACTCCGCCTTCTCCGGCGTCCAGGACGCCTTGACGCAATGGTGGTATGGCCACAACGCCGTCGG
TTTCTTCCTCACCGCCGGGTTCCTCGGCATGATGTATTATTTCGTGCCCAAGCAGGCGAACCGGCCGGTCTATTCCTACC
GCCTGTCGATCGTCCACTTCTGGGCGATCATCTTTCTCTACATCTGGGCCGGCCCGCACCACCTGCACTACACCGCCTTA
CCCGACTGGGCGCAGACGCTCGGCATGGCGTTCTCGATCATGCTGTGGATGCCGTCATGGGGCGGTATGATCAATGGCCT
GATGACGCTGTCTGGCGCCTGGGACAAGCTGCGCACCGATCCGATCATCCGCATGATGGTGATGGCAGTCGCCTTCTACG
GCATGTCGACCTTCGAAGGTCCGATTATGTCGATCAAGACGGTCAATTCGCTGTCGCACTACACGGACTGGACCATCGGC
CATGTCCATTCCGGCGCGCTCGGCTGGGTTGGCATGATCTCGTTCGGCGCAATCTACTACATGGTGCCGAAACTGTGGAA
TCGTGAACGTCTCTATTCGCTGCGGCTCGTCACCTGGCACTTCTGGCTGGCGACGCTCGGAATCGTCGTCTACGCCGCGG
TGATGTGGGTTTCCGGCATCATGCAGGGCCTGATGTGGCGCGAATACAACGAGCAGGGTTTCCTCGTCTACTCCTTCGCC
GAAACCGTCGCCGCCATGCATCCCTTCTACGTCATGCGCGCCATCGGCGGTGCGATGTACCTCACCGGCGCCCTGCTCAT
GGCCTGGAACGTGACCATGACCATTCTTGGCCACGAGCGCGAAGAGCAACCAATGCCAGGTTCCGAGCCCGCCCTCCGGC
CTGCCGAATAG

Upstream 100 bases:

>100_bases
TGCGGCTCTGACATGGATCAGGGCGAGCAGGCGGCAACTACGGAATTAATGCACCGCGGATTTGGCGTCCGCGCATTGGA
ATCCTGGTCGGGGACATGTC

Downstream 100 bases:

>100_bases
GGAGCCAGACAATGGGCTTGATGGACAAACACGCGATCATCGAGAAGAACGCCACGCTTCTTCTCGTTGGCTCTCTTCTT
GTGGTGACCGTCGGCGGCAT

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MKFGTEIVVLSLFAFAALVAAGFGVEGPFRQHMGVLFVAVAGFTAILLRNTDFKPAAPVDTSAYMDGPIRYGAIATVFWG
VVGMLVGVIIALQLAYPHLNIQPWFNFGRLRPLHTSGVVFAFGGNALLCTSLYVVQRTCRARLFGGKLAWFVFWGYQLFI
VMAATGYLLGITESREYAEPEWYVDIWLTIVWVAYLILFLGTILKRKEPHIYVANWFYLSFIVTIAMLHVINNLSMPASF
LGSKSYSAFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFVPKQANRPVYSYRLSIVHFWAIIFLYIWAGPHHLHYTAL
PDWAQTLGMAFSIMLWMPSWGGMINGLMTLSGAWDKLRTDPIIRMMVMAVAFYGMSTFEGPIMSIKTVNSLSHYTDWTIG
HVHSGALGWVGMISFGAIYYMVPKLWNRERLYSLRLVTWHFWLATLGIVVYAAVMWVSGIMQGLMWREYNEQGFLVYSFA
ETVAAMHPFYVMRAIGGAMYLTGALLMAWNVTMTILGHEREEQPMPGSEPALRPAE

Sequences:

>Translated_536_residues
MKFGTEIVVLSLFAFAALVAAGFGVEGPFRQHMGVLFVAVAGFTAILLRNTDFKPAAPVDTSAYMDGPIRYGAIATVFWG
VVGMLVGVIIALQLAYPHLNIQPWFNFGRLRPLHTSGVVFAFGGNALLCTSLYVVQRTCRARLFGGKLAWFVFWGYQLFI
VMAATGYLLGITESREYAEPEWYVDIWLTIVWVAYLILFLGTILKRKEPHIYVANWFYLSFIVTIAMLHVINNLSMPASF
LGSKSYSAFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFVPKQANRPVYSYRLSIVHFWAIIFLYIWAGPHHLHYTAL
PDWAQTLGMAFSIMLWMPSWGGMINGLMTLSGAWDKLRTDPIIRMMVMAVAFYGMSTFEGPIMSIKTVNSLSHYTDWTIG
HVHSGALGWVGMISFGAIYYMVPKLWNRERLYSLRLVTWHFWLATLGIVVYAAVMWVSGIMQGLMWREYNEQGFLVYSFA
ETVAAMHPFYVMRAIGGAMYLTGALLMAWNVTMTILGHEREEQPMPGSEPALRPAE
>Mature_536_residues
MKFGTEIVVLSLFAFAALVAAGFGVEGPFRQHMGVLFVAVAGFTAILLRNTDFKPAAPVDTSAYMDGPIRYGAIATVFWG
VVGMLVGVIIALQLAYPHLNIQPWFNFGRLRPLHTSGVVFAFGGNALLCTSLYVVQRTCRARLFGGKLAWFVFWGYQLFI
VMAATGYLLGITESREYAEPEWYVDIWLTIVWVAYLILFLGTILKRKEPHIYVANWFYLSFIVTIAMLHVINNLSMPASF
LGSKSYSAFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFVPKQANRPVYSYRLSIVHFWAIIFLYIWAGPHHLHYTAL
PDWAQTLGMAFSIMLWMPSWGGMINGLMTLSGAWDKLRTDPIIRMMVMAVAFYGMSTFEGPIMSIKTVNSLSHYTDWTIG
HVHSGALGWVGMISFGAIYYMVPKLWNRERLYSLRLVTWHFWLATLGIVVYAAVMWVSGIMQGLMWREYNEQGFLVYSFA
ETVAAMHPFYVMRAIGGAMYLTGALLMAWNVTMTILGHEREEQPMPGSEPALRPAE

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 60507; Mature: 60507

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFGTEIVVLSLFAFAALVAAGFGVEGPFRQHMGVLFVAVAGFTAILLRNTDFKPAAPVD
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TSAYMDGPIRYGAIATVFWGVVGMLVGVIIALQLAYPHLNIQPWFNFGRLRPLHTSGVVF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEE
AFGGNALLCTSLYVVQRTCRARLFGGKLAWFVFWGYQLFIVMAATGYLLGITESREYAEP
EECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC
EWYVDIWLTIVWVAYLILFLGTILKRKEPHIYVANWFYLSFIVTIAMLHVINNLSMPASF
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHH
LGSKSYSAFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFVPKQANRPVYSYRLSIVHF
HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
WAIIFLYIWAGPHHLHYTALPDWAQTLGMAFSIMLWMPSWGGMINGLMTLSGAWDKLRTD
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCC
PIIRMMVMAVAFYGMSTFEGPIMSIKTVNSLSHYTDWTIGHVHSGALGWVGMISFGAIYY
HHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHH
MVPKLWNRERLYSLRLVTWHFWLATLGIVVYAAVMWVSGIMQGLMWREYNEQGFLVYSFA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHH
ETVAAMHPFYVMRAIGGAMYLTGALLMAWNVTMTILGHEREEQPMPGSEPALRPAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKFGTEIVVLSLFAFAALVAAGFGVEGPFRQHMGVLFVAVAGFTAILLRNTDFKPAAPVD
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TSAYMDGPIRYGAIATVFWGVVGMLVGVIIALQLAYPHLNIQPWFNFGRLRPLHTSGVVF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEE
AFGGNALLCTSLYVVQRTCRARLFGGKLAWFVFWGYQLFIVMAATGYLLGITESREYAEP
EECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC
EWYVDIWLTIVWVAYLILFLGTILKRKEPHIYVANWFYLSFIVTIAMLHVINNLSMPASF
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHH
LGSKSYSAFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFVPKQANRPVYSYRLSIVHF
HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
WAIIFLYIWAGPHHLHYTALPDWAQTLGMAFSIMLWMPSWGGMINGLMTLSGAWDKLRTD
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCC
PIIRMMVMAVAFYGMSTFEGPIMSIKTVNSLSHYTDWTIGHVHSGALGWVGMISFGAIYY
HHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHH
MVPKLWNRERLYSLRLVTWHFWLATLGIVVYAAVMWVSGIMQGLMWREYNEQGFLVYSFA
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHH
ETVAAMHPFYVMRAIGGAMYLTGALLMAWNVTMTILGHEREEQPMPGSEPALRPAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]