Click here to switch to the map view.

The map label for this gene is 13475337

Identifier: 13475337

GI number: 13475337

Start: 5205589

End: 5205975

Strand: Reverse

Name: 13475337

Synonym: mll6379

Alternate gene names: NA

Gene position: 5205975-5205589 (Counterclockwise)

Preceding gene: 13475338

Following gene: 13475336

Centisome position: 73.99

GC content: 58.4

Gene sequence:

>387_bases
GTGATCATGGACAATCTCGGCTCGCACAAGGGCAAGGCAATGCGCCGCGCCATTCGCGGCGTCGGTGCCAGACTCCTGCT
CCTGCCGAAATATTCGCCCGATCTGAACCCGATCGAGCAAGCTTTGCCAAGCTCAAGCACTGGCTCAGAAAGGCGGCGCG
CCGAACCGTCGATACTGTCTGCAGCGCGATCGGCGAAATCCTCGATGGCCTCACCGCAACCGAATGCAACAACTACTTCG
AAAACGCCGGATTTGTTCAACCTAAAATCATCCTGCTCTAGGGTTCACAACAGCATGACCGGATCATGGGGAACTTGTGG
GCCGCTTGCTTGCGGAGAACTGGGTGGCGTCACCGACACCCGTACGCTCCGGCCTGGATCTGCTTGA

Upstream 100 bases:

>100_bases
CCTGGACGCGCCATGGCTGATCGACGGACCGATCAACGGCGAGCGGTTCCGGCTCTATGTCGAGCAGGTTCTGGTTCCGA
CCCTTAAACCCGGTGACATC

Downstream 100 bases:

>100_bases
TCAGGGATTGATAAATTCGACGCGTCGCTCCCGTGCTGCGAGAACCCTCCTCATACTGGACCAATTAAAATCTCCAAAAG
TGGCAGTTTAGTTTGGACCA

Product: transposase

Products: NA

Alternate protein names: Transposase IS; Transposase And Inactivated Derivatives-Like Protein; Insertion Sequence Transposase Protein

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MIMDNLGSHKGKAMRRAIRGVGARLLLLPKYSPDLNPIEQALPSSSTGSERRRAEPSILSAARSAKSSMASPQPNATTTS
KTPDLFNLKSSCSRVHNSMTGSWGTCGPLACGELGGVTDTRTLRPGSA

Sequences:

>Translated_128_residues
MIMDNLGSHKGKAMRRAIRGVGARLLLLPKYSPDLNPIEQALPSSSTGSERRRAEPSILSAARSAKSSMASPQPNATTTS
KTPDLFNLKSSCSRVHNSMTGSWGTCGPLACGELGGVTDTRTLRPGSA
>Mature_128_residues
MIMDNLGSHKGKAMRRAIRGVGARLLLLPKYSPDLNPIEQALPSSSTGSERRRAEPSILSAARSAKSSMASPQPNATTTS
KTPDLFNLKSSCSRVHNSMTGSWGTCGPLACGELGGVTDTRTLRPGSA

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13440; Mature: 13440

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMDNLGSHKGKAMRRAIRGVGARLLLLPKYSPDLNPIEQALPSSSTGSERRRAEPSILS
CCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCHHHHCCHHHHH
AARSAKSSMASPQPNATTTSKTPDLFNLKSSCSRVHNSMTGSWGTCGPLACGELGGVTDT
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
RTLRPGSA
CCCCCCCC
>Mature Secondary Structure
MIMDNLGSHKGKAMRRAIRGVGARLLLLPKYSPDLNPIEQALPSSSTGSERRRAEPSILS
CCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCHHHHCCHHHHH
AARSAKSSMASPQPNATTTSKTPDLFNLKSSCSRVHNSMTGSWGTCGPLACGELGGVTDT
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
RTLRPGSA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA