Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475318

Identifier: 13475318

GI number: 13475318

Start: 5170584

End: 5171576

Strand: Reverse

Name: 13475318

Synonym: mll6355

Alternate gene names: NA

Gene position: 5171576-5170584 (Counterclockwise)

Preceding gene: 13475319

Following gene: 13475317

Centisome position: 73.5

GC content: 65.86

Gene sequence:

>993_bases
GTGCTTCATATGGAGGGAGCGATGGATCTCCAGGACGGAATCGAAACGAGTGAATCGCGTTTTGCGGCCTATGTCGAGAC
GCTGGCCTCGGTATTGGGTCACGCTGACCGGGTGGCGCCGCTGAAGGCCTATTGCACCGGGCTGCTTTTGCCGCGCGAGC
GCAAAAGCGTCGAGCCGATGGCGGCACGGGTGGAGCCTGGGCGTGTCCAGGCGGCGCACCAGTCGCTGCATCATTTCGTA
GCGAAGGCGGATTGGTCGGATGATGCCGTGCTGAGCCGCGTGCGGGAACAGGTGCTGCCAGCGCTTGAGCGTCAGGGGCA
GATCCGTGCTTGGATCGTCGACGACACCGGCTTTCCCAAGAAAGGCAAGCATTCGGTTGGGGTTGCACGGCAGTATTGCG
GGCAGCTCGGCAAGCAGGACAACTGCCAGGTCGCGGTCTCTCTGTCGGTTGCCACCGAGCAGGCGAGCCTGCCGATTGCC
TATCAGCTCTATCTGCCGGAAAGCTGGGCGAACGACCCTGACCGGCGGGCCAAGACAGGCGTGCCGGAGAATGTGGTCTT
CCGCACCAAGCCCGAAATCGCCCTCGCGCAGATTCGGGCGGCGCTGGAGGCCGGCGTCTCACGGGGCGTGGTGCTGGCCG
ATGCCGGTTACGGCAACGACACCGCCTTCCGCACCGGGCTGACAAAGGTGGGCTTGACCTATGTCGTCGGGGTCCAGTCC
TCGATCCGCCTGTGGTCGCCCGGCACGCAACCATTGCCGCCGAAGCCGTGGAGCGGACGCGGACCCCGCCCTCGCGCGTT
CGGCGGCAGGCTGAACATGCGCCGGTCTCAGCCAAGGAACTGGCGCAAGCGCTGCCCGAGGACGCCTGGCACATGGTTAC
TTGGCGCGAGGGCTCCAAGGCGTCGCTTGCCTCACGCTTTGCCACCGTGCGGGTTCGGCCGGCCCATCGCGACTACTGGC
GCTCCATCCCCCACGCTGAGGAATGGTTCCTGA

Upstream 100 bases:

>100_bases
TGTTCTCTTTAAGAGACGCCGATCCGGCACTCTACAAACTGGCCCCTAGTCTTACTGTGTCGTAAGTTTCGTTAACGACT
GATTGCGAGAATGGCGATTC

Downstream 100 bases:

>100_bases
TCGAATGGCCGGACGGTGAAGTCGAGCCAACTAAGTACTGGCTCTCGACCTTGCCCGGAAAGACCAGGCTTGCCGACCTC
GTCGATCAGGCCAAGATGCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MLHMEGAMDLQDGIETSESRFAAYVETLASVLGHADRVAPLKAYCTGLLLPRERKSVEPMAARVEPGRVQAAHQSLHHFV
AKADWSDDAVLSRVREQVLPALERQGQIRAWIVDDTGFPKKGKHSVGVARQYCGQLGKQDNCQVAVSLSVATEQASLPIA
YQLYLPESWANDPDRRAKTGVPENVVFRTKPEIALAQIRAALEAGVSRGVVLADAGYGNDTAFRTGLTKVGLTYVVGVQS
SIRLWSPGTQPLPPKPWSGRGPRPRAFGGRLNMRRSQPRNWRKRCPRTPGTWLLGARAPRRRLPHALPPCGFGRPIATTG
APSPTLRNGS

Sequences:

>Translated_330_residues
MLHMEGAMDLQDGIETSESRFAAYVETLASVLGHADRVAPLKAYCTGLLLPRERKSVEPMAARVEPGRVQAAHQSLHHFV
AKADWSDDAVLSRVREQVLPALERQGQIRAWIVDDTGFPKKGKHSVGVARQYCGQLGKQDNCQVAVSLSVATEQASLPIA
YQLYLPESWANDPDRRAKTGVPENVVFRTKPEIALAQIRAALEAGVSRGVVLADAGYGNDTAFRTGLTKVGLTYVVGVQS
SIRLWSPGTQPLPPKPWSGRGPRPRAFGGRLNMRRSQPRNWRKRCPRTPGTWLLGARAPRRRLPHALPPCGFGRPIATTG
APSPTLRNGS
>Mature_330_residues
MLHMEGAMDLQDGIETSESRFAAYVETLASVLGHADRVAPLKAYCTGLLLPRERKSVEPMAARVEPGRVQAAHQSLHHFV
AKADWSDDAVLSRVREQVLPALERQGQIRAWIVDDTGFPKKGKHSVGVARQYCGQLGKQDNCQVAVSLSVATEQASLPIA
YQLYLPESWANDPDRRAKTGVPENVVFRTKPEIALAQIRAALEAGVSRGVVLADAGYGNDTAFRTGLTKVGLTYVVGVQS
SIRLWSPGTQPLPPKPWSGRGPRPRAFGGRLNMRRSQPRNWRKRCPRTPGTWLLGARAPRRRLPHALPPCGFGRPIATTG
APSPTLRNGS

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG5659

COG function: function code L; FOG: Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36026; Mature: 36026

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHMEGAMDLQDGIETSESRFAAYVETLASVLGHADRVAPLKAYCTGLLLPRERKSVEPM
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCCCHHCCCCHH
AARVEPGRVQAAHQSLHHFVAKADWSDDAVLSRVREQVLPALERQGQIRAWIVDDTGFPK
HHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
KGKHSVGVARQYCGQLGKQDNCQVAVSLSVATEQASLPIAYQLYLPESWANDPDRRAKTG
CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEEECHHHCCCCHHHHHCC
VPENVVFRTKPEIALAQIRAALEAGVSRGVVLADAGYGNDTAFRTGLTKVGLTYVVGVQS
CCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHEEEEECCC
SIRLWSPGTQPLPPKPWSGRGPRPRAFGGRLNMRRSQPRNWRKRCPRTPGTWLLGARAPR
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCHH
RRLPHALPPCGFGRPIATTGAPSPTLRNGS
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLHMEGAMDLQDGIETSESRFAAYVETLASVLGHADRVAPLKAYCTGLLLPRERKSVEPM
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCCCHHCCCCHH
AARVEPGRVQAAHQSLHHFVAKADWSDDAVLSRVREQVLPALERQGQIRAWIVDDTGFPK
HHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
KGKHSVGVARQYCGQLGKQDNCQVAVSLSVATEQASLPIAYQLYLPESWANDPDRRAKTG
CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEEECHHHCCCCHHHHHCC
VPENVVFRTKPEIALAQIRAALEAGVSRGVVLADAGYGNDTAFRTGLTKVGLTYVVGVQS
CCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHEEEEECCC
SIRLWSPGTQPLPPKPWSGRGPRPRAFGGRLNMRRSQPRNWRKRCPRTPGTWLLGARAPR
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCHH
RRLPHALPPCGFGRPIATTGAPSPTLRNGS
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]