| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475318
Identifier: 13475318
GI number: 13475318
Start: 5170584
End: 5171576
Strand: Reverse
Name: 13475318
Synonym: mll6355
Alternate gene names: NA
Gene position: 5171576-5170584 (Counterclockwise)
Preceding gene: 13475319
Following gene: 13475317
Centisome position: 73.5
GC content: 65.86
Gene sequence:
>993_bases GTGCTTCATATGGAGGGAGCGATGGATCTCCAGGACGGAATCGAAACGAGTGAATCGCGTTTTGCGGCCTATGTCGAGAC GCTGGCCTCGGTATTGGGTCACGCTGACCGGGTGGCGCCGCTGAAGGCCTATTGCACCGGGCTGCTTTTGCCGCGCGAGC GCAAAAGCGTCGAGCCGATGGCGGCACGGGTGGAGCCTGGGCGTGTCCAGGCGGCGCACCAGTCGCTGCATCATTTCGTA GCGAAGGCGGATTGGTCGGATGATGCCGTGCTGAGCCGCGTGCGGGAACAGGTGCTGCCAGCGCTTGAGCGTCAGGGGCA GATCCGTGCTTGGATCGTCGACGACACCGGCTTTCCCAAGAAAGGCAAGCATTCGGTTGGGGTTGCACGGCAGTATTGCG GGCAGCTCGGCAAGCAGGACAACTGCCAGGTCGCGGTCTCTCTGTCGGTTGCCACCGAGCAGGCGAGCCTGCCGATTGCC TATCAGCTCTATCTGCCGGAAAGCTGGGCGAACGACCCTGACCGGCGGGCCAAGACAGGCGTGCCGGAGAATGTGGTCTT CCGCACCAAGCCCGAAATCGCCCTCGCGCAGATTCGGGCGGCGCTGGAGGCCGGCGTCTCACGGGGCGTGGTGCTGGCCG ATGCCGGTTACGGCAACGACACCGCCTTCCGCACCGGGCTGACAAAGGTGGGCTTGACCTATGTCGTCGGGGTCCAGTCC TCGATCCGCCTGTGGTCGCCCGGCACGCAACCATTGCCGCCGAAGCCGTGGAGCGGACGCGGACCCCGCCCTCGCGCGTT CGGCGGCAGGCTGAACATGCGCCGGTCTCAGCCAAGGAACTGGCGCAAGCGCTGCCCGAGGACGCCTGGCACATGGTTAC TTGGCGCGAGGGCTCCAAGGCGTCGCTTGCCTCACGCTTTGCCACCGTGCGGGTTCGGCCGGCCCATCGCGACTACTGGC GCTCCATCCCCCACGCTGAGGAATGGTTCCTGA
Upstream 100 bases:
>100_bases TGTTCTCTTTAAGAGACGCCGATCCGGCACTCTACAAACTGGCCCCTAGTCTTACTGTGTCGTAAGTTTCGTTAACGACT GATTGCGAGAATGGCGATTC
Downstream 100 bases:
>100_bases TCGAATGGCCGGACGGTGAAGTCGAGCCAACTAAGTACTGGCTCTCGACCTTGCCCGGAAAGACCAGGCTTGCCGACCTC GTCGATCAGGCCAAGATGCG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MLHMEGAMDLQDGIETSESRFAAYVETLASVLGHADRVAPLKAYCTGLLLPRERKSVEPMAARVEPGRVQAAHQSLHHFV AKADWSDDAVLSRVREQVLPALERQGQIRAWIVDDTGFPKKGKHSVGVARQYCGQLGKQDNCQVAVSLSVATEQASLPIA YQLYLPESWANDPDRRAKTGVPENVVFRTKPEIALAQIRAALEAGVSRGVVLADAGYGNDTAFRTGLTKVGLTYVVGVQS SIRLWSPGTQPLPPKPWSGRGPRPRAFGGRLNMRRSQPRNWRKRCPRTPGTWLLGARAPRRRLPHALPPCGFGRPIATTG APSPTLRNGS
Sequences:
>Translated_330_residues MLHMEGAMDLQDGIETSESRFAAYVETLASVLGHADRVAPLKAYCTGLLLPRERKSVEPMAARVEPGRVQAAHQSLHHFV AKADWSDDAVLSRVREQVLPALERQGQIRAWIVDDTGFPKKGKHSVGVARQYCGQLGKQDNCQVAVSLSVATEQASLPIA YQLYLPESWANDPDRRAKTGVPENVVFRTKPEIALAQIRAALEAGVSRGVVLADAGYGNDTAFRTGLTKVGLTYVVGVQS SIRLWSPGTQPLPPKPWSGRGPRPRAFGGRLNMRRSQPRNWRKRCPRTPGTWLLGARAPRRRLPHALPPCGFGRPIATTG APSPTLRNGS >Mature_330_residues MLHMEGAMDLQDGIETSESRFAAYVETLASVLGHADRVAPLKAYCTGLLLPRERKSVEPMAARVEPGRVQAAHQSLHHFV AKADWSDDAVLSRVREQVLPALERQGQIRAWIVDDTGFPKKGKHSVGVARQYCGQLGKQDNCQVAVSLSVATEQASLPIA YQLYLPESWANDPDRRAKTGVPENVVFRTKPEIALAQIRAALEAGVSRGVVLADAGYGNDTAFRTGLTKVGLTYVVGVQS SIRLWSPGTQPLPPKPWSGRGPRPRAFGGRLNMRRSQPRNWRKRCPRTPGTWLLGARAPRRRLPHALPPCGFGRPIATTG APSPTLRNGS
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36026; Mature: 36026
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHMEGAMDLQDGIETSESRFAAYVETLASVLGHADRVAPLKAYCTGLLLPRERKSVEPM CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCCCHHCCCCHH AARVEPGRVQAAHQSLHHFVAKADWSDDAVLSRVREQVLPALERQGQIRAWIVDDTGFPK HHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC KGKHSVGVARQYCGQLGKQDNCQVAVSLSVATEQASLPIAYQLYLPESWANDPDRRAKTG CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEEECHHHCCCCHHHHHCC VPENVVFRTKPEIALAQIRAALEAGVSRGVVLADAGYGNDTAFRTGLTKVGLTYVVGVQS CCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHEEEEECCC SIRLWSPGTQPLPPKPWSGRGPRPRAFGGRLNMRRSQPRNWRKRCPRTPGTWLLGARAPR CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCHH RRLPHALPPCGFGRPIATTGAPSPTLRNGS HHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLHMEGAMDLQDGIETSESRFAAYVETLASVLGHADRVAPLKAYCTGLLLPRERKSVEPM CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCCCHHCCCCHH AARVEPGRVQAAHQSLHHFVAKADWSDDAVLSRVREQVLPALERQGQIRAWIVDDTGFPK HHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC KGKHSVGVARQYCGQLGKQDNCQVAVSLSVATEQASLPIAYQLYLPESWANDPDRRAKTG CCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEEECHHHCCCCHHHHHCC VPENVVFRTKPEIALAQIRAALEAGVSRGVVLADAGYGNDTAFRTGLTKVGLTYVVGVQS CCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHEEEEECCC SIRLWSPGTQPLPPKPWSGRGPRPRAFGGRLNMRRSQPRNWRKRCPRTPGTWLLGARAPR CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCHH RRLPHALPPCGFGRPIATTGAPSPTLRNGS HHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]