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The map label for this gene is 13475314

Identifier: 13475314

GI number: 13475314

Start: 5169378

End: 5170109

Strand: Reverse

Name: 13475314

Synonym: mll6352

Alternate gene names: NA

Gene position: 5170109-5169378 (Counterclockwise)

Preceding gene: 13475316

Following gene: 13475312

Centisome position: 73.48

GC content: 59.02

Gene sequence:

>732_bases
GTGCGAACATGGGCCATGTCAGAAGTTGCTCGTGATCCGCTTTATCGTTGCCACCGCTTTCCCGCCGAGATCATTGCGCA
CGCGGTATGGCTCTACTTTCGCTTTCCGCTCAGCCTGCGCATGGTTGAGGACATGTTGGCGGCCCGCGGCATCATCGTCA
CGCATCAGACCATTCGAAGCTGGGCGGAGAAATTCGGGCGGCATTTCGCCCGGGAGATCAAGCGACGGTCAGCCGGCTGC
CTGGGCGACAAATGGCATCTCGACGAATGTGTGGTGGCCATCAATGGCAAGAAGCAGTGGCTCTGGCGTGCCGTCGATCA
GGACGGCTTGGTCCTCGAAGTGCTGGTGCAAAGCCGCCGAAATGCCAAGGCGGCAAAGCGTCTGATGCGCAAGTTGCTGA
AGGCTCAAGGGCGGACACCACGAGTCATGATCACCGACAAGCTCCGGTCCTATGATGCCGCCAGGCGCGACCTCATGCCC
GGTGTCGAACACCGGTCGCACAAAGGCCTCAATAATCGAGCGGAAAATTCGCACCAGCCGACCCGACGACGCGAAAGGAC
CATGAAACGCTTCAAGTCGGCACGCCAGCTTCAGCGGTTCGTTTCCATCCATGATCCGATTGCCAACCTGTTCCACTTTC
CCCGCAATACGCTGTCATCGGCTCAACATCGAGACCTGCGTAACGCCGCCATGCAAATCTGGAACAAAATCGCGTGTCTC
GCCGCAGCGTGA

Upstream 100 bases:

>100_bases
ATGCACGTCGCCTGCGCCGCAAGGCGCCATCGAAAGACGATGTCTGGCATCTTGATGAGGTAGCCGGGCACCGTAAAGTT
AACCGACGGCTGATGAAGAT

Downstream 100 bases:

>100_bases
CAGCCGTCCCGGCCAGCTATCGCTGCATCAATCCGCTGATAACTTTACAGTGCCCGAAGCCTTCCGACCATGAGGCGAAT
GGAGGCCAGCTTGAGGAAGG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MRTWAMSEVARDPLYRCHRFPAEIIAHAVWLYFRFPLSLRMVEDMLAARGIIVTHQTIRSWAEKFGRHFAREIKRRSAGC
LGDKWHLDECVVAINGKKQWLWRAVDQDGLVLEVLVQSRRNAKAAKRLMRKLLKAQGRTPRVMITDKLRSYDAARRDLMP
GVEHRSHKGLNNRAENSHQPTRRRERTMKRFKSARQLQRFVSIHDPIANLFHFPRNTLSSAQHRDLRNAAMQIWNKIACL
AAA

Sequences:

>Translated_243_residues
MRTWAMSEVARDPLYRCHRFPAEIIAHAVWLYFRFPLSLRMVEDMLAARGIIVTHQTIRSWAEKFGRHFAREIKRRSAGC
LGDKWHLDECVVAINGKKQWLWRAVDQDGLVLEVLVQSRRNAKAAKRLMRKLLKAQGRTPRVMITDKLRSYDAARRDLMP
GVEHRSHKGLNNRAENSHQPTRRRERTMKRFKSARQLQRFVSIHDPIANLFHFPRNTLSSAQHRDLRNAAMQIWNKIACL
AAA
>Mature_243_residues
MRTWAMSEVARDPLYRCHRFPAEIIAHAVWLYFRFPLSLRMVEDMLAARGIIVTHQTIRSWAEKFGRHFAREIKRRSAGC
LGDKWHLDECVVAINGKKQWLWRAVDQDGLVLEVLVQSRRNAKAAKRLMRKLLKAQGRTPRVMITDKLRSYDAARRDLMP
GVEHRSHKGLNNRAENSHQPTRRRERTMKRFKSARQLQRFVSIHDPIANLFHFPRNTLSSAQHRDLRNAAMQIWNKIACL
AAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 28479; Mature: 28479

Theoretical pI: Translated: 11.85; Mature: 11.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCC
>Mature Secondary Structure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HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]