| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475271
Identifier: 13475271
GI number: 13475271
Start: 5117971
End: 5118849
Strand: Reverse
Name: 13475271
Synonym: mll6303
Alternate gene names: NA
Gene position: 5118849-5117971 (Counterclockwise)
Preceding gene: 13475272
Following gene: 13475270
Centisome position: 72.75
GC content: 61.32
Gene sequence:
>879_bases ATGCAGCCTCCGGTTTTTGCGCCAAGCTGTACGGACAATGAAAGCCTGCCCGTGACAGACCGTGAAATCCACCTCTACCT CGATGACAGCGGCAGCCGCGAGCCAGACCGAGAGCCTAAAGAGAAGCGCCGGGACGAAATGGACTATTTCGCCCTCGGCG GCATCCTCATCAACGAGGAAGACGTCGATGAGCTCTATGCCCGCCACAAGGCCTTCTGCCAGAAGCACGGCATCACCTAC CCGCTCCACTCCTGGGCCATCCGCGGCGGCCGTGGCGACTTCGGCTGGCTAAAGAAGCCGGAGTCCGCTTTTGAATTCCT GGGCGATCTGCAGGGGATGCTTCTCGCGCTGCCCGTGATCGGCATCGCCGCGGTGATCGACCGACCGGGCTACGTTGCCC GTTACCGGGACCGGTATCAGGATCAGCTCTGGTTCATGTGCAAGACCGCCTACTGCATCCTGATCGAGCGCGCCGCCAAA TATGCCCGCAGCCAGGACCGCAAGCTGCGCGTGTTCTTCGAGAGGGCTGGCAAAGCCGAGGACCGCGACCTGATAGCCTA CACGCGGATCCTGAAGACGCAGGGGATGCCGTTCGATGGCGTCAACTCCGCCAGCTACGGGTCATTAACCGCTGAGGAGT TCAAAGACATCGTGCGCGGGGAGCCGCGCGGCAGAACCAAAGCCACGCCGATGTTGCAGATCGCCGATCTCTACCTCTAT CCGATGGCCAAGGGCGGCTATGACCCGTCCTACCGGCCCTACAGGGCCCTGATGGACCACAAGCGTCTCATCGACGCGCA CCTGCCGCCCGAGGACCTGGCATCCTGCGGCATCAAATACAGCTGTTTTGAACGGATAAAAAACAAAGACCCGGACTAG
Upstream 100 bases:
>100_bases GGTCGGGTGTGAGACGAGGGCAAGCTGCTCTTTGAAAGCGGATCGCAACGCCAAGAAGCCGCCGCACTGATCCCTGGCCC GGACGGGTCATCAGTGTGCT
Downstream 100 bases:
>100_bases CCGGGCCTTCGTTTTGAAATGGTCGGCTGGCGCCTGGCGCCAACCCCGGAGCGATGCTCACCTGCAAAGTATGGGTATTG ACGCTCTCTTTGTCAACACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MQPPVFAPSCTDNESLPVTDREIHLYLDDSGSREPDREPKEKRRDEMDYFALGGILINEEDVDELYARHKAFCQKHGITY PLHSWAIRGGRGDFGWLKKPESAFEFLGDLQGMLLALPVIGIAAVIDRPGYVARYRDRYQDQLWFMCKTAYCILIERAAK YARSQDRKLRVFFERAGKAEDRDLIAYTRILKTQGMPFDGVNSASYGSLTAEEFKDIVRGEPRGRTKATPMLQIADLYLY PMAKGGYDPSYRPYRALMDHKRLIDAHLPPEDLASCGIKYSCFERIKNKDPD
Sequences:
>Translated_292_residues MQPPVFAPSCTDNESLPVTDREIHLYLDDSGSREPDREPKEKRRDEMDYFALGGILINEEDVDELYARHKAFCQKHGITY PLHSWAIRGGRGDFGWLKKPESAFEFLGDLQGMLLALPVIGIAAVIDRPGYVARYRDRYQDQLWFMCKTAYCILIERAAK YARSQDRKLRVFFERAGKAEDRDLIAYTRILKTQGMPFDGVNSASYGSLTAEEFKDIVRGEPRGRTKATPMLQIADLYLY PMAKGGYDPSYRPYRALMDHKRLIDAHLPPEDLASCGIKYSCFERIKNKDPD >Mature_292_residues MQPPVFAPSCTDNESLPVTDREIHLYLDDSGSREPDREPKEKRRDEMDYFALGGILINEEDVDELYARHKAFCQKHGITY PLHSWAIRGGRGDFGWLKKPESAFEFLGDLQGMLLALPVIGIAAVIDRPGYVARYRDRYQDQLWFMCKTAYCILIERAAK YARSQDRKLRVFFERAGKAEDRDLIAYTRILKTQGMPFDGVNSASYGSLTAEEFKDIVRGEPRGRTKATPMLQIADLYLY PMAKGGYDPSYRPYRALMDHKRLIDAHLPPEDLASCGIKYSCFERIKNKDPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33524; Mature: 33524
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPPVFAPSCTDNESLPVTDREIHLYLDDSGSREPDREPKEKRRDEMDYFALGGILINEE CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCEEECCEEECHH DVDELYARHKAFCQKHGITYPLHSWAIRGGRGDFGWLKKPESAFEFLGDLQGMLLALPVI HHHHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GIAAVIDRPGYVARYRDRYQDQLWFMCKTAYCILIERAAKYARSQDRKLRVFFERAGKAE HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC DRDLIAYTRILKTQGMPFDGVNSASYGSLTAEEFKDIVRGEPRGRTKATPMLQIADLYLY CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHE PMAKGGYDPSYRPYRALMDHKRLIDAHLPPEDLASCGIKYSCFERIKNKDPD ECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCC >Mature Secondary Structure MQPPVFAPSCTDNESLPVTDREIHLYLDDSGSREPDREPKEKRRDEMDYFALGGILINEE CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCEEECCEEECHH DVDELYARHKAFCQKHGITYPLHSWAIRGGRGDFGWLKKPESAFEFLGDLQGMLLALPVI HHHHHHHHHHHHHHHCCCCCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GIAAVIDRPGYVARYRDRYQDQLWFMCKTAYCILIERAAKYARSQDRKLRVFFERAGKAE HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC DRDLIAYTRILKTQGMPFDGVNSASYGSLTAEEFKDIVRGEPRGRTKATPMLQIADLYLY CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHE PMAKGGYDPSYRPYRALMDHKRLIDAHLPPEDLASCGIKYSCFERIKNKDPD ECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]