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The map label for this gene is 13475238

Identifier: 13475238

GI number: 13475238

Start: 5084346

End: 5084993

Strand: Direct

Name: 13475238

Synonym: mlr6265

Alternate gene names: NA

Gene position: 5084346-5084993 (Clockwise)

Preceding gene: 13475236

Following gene: 13475239

Centisome position: 72.26

GC content: 57.72

Gene sequence:

>648_bases
ATGGAGAATAAAAAGGCATTGTTGAAACCGAAACGCTCCGGCCTCTTCCAGGCGAAGGCGACGCTCAACAGCAAGAGCAG
ACCTCATCCCGCCGATCAGCATGTAGGCCGGCAGATCGCCACTGTTCGCCTCCAATCGGACGTTTCGCAAGCTCAGCTTG
CCCGAGCGATAGGCGTCAGCTTTCAACAACTCCAGAAATATGAGAACGCAAGAAACCGCGTCAGTGCATCAATGCTTTAC
GAAATCGCGAGGTCGCTGGACGTTCCTGTCAGCCGCTTCTTCGAAGGCCTGCTGGGAAACGAGATCAGCGGTGAAACTTC
GCCTCTGCCGATCGATGAACGCATAGAGTTTATTGCGAGCGCGGAAGGCCGGCGCCTGATTGAGGGGCTGATGCGCCTTC
ATCCTCGGGTGCGGTCGCGTGTCGGCTCTGATCTCTGCATTGGGCGAAGAATTGGCTTCATTCGACCTGAAGAAAGACAA
CGACACGGCCGGCTGAGTCGCCTAGGAAGCCCCAGCGCCATCAATACACGAAGGGGCTGGCCCGCAACGGGCGCAGCGTT
CGCTGAAGCTTTCGGCCGACCGCGCAGTGCATTTCGGGCGTGGTTGCTTGCCTTTGGATTGCATCTGCCGAAATCCCGCG
TATCCTGA

Upstream 100 bases:

>100_bases
GTCTGCTCGGCTACATCTGGCGAGCGGGTAACATTCTTGGTGAGGCAGCCGGGAACAAAGTCGTGTGAGGCAACACGACA
TCTCTACCCGGACGTGATTG

Downstream 100 bases:

>100_bases
TTGTGCGCATGTGAGCATAAGGTGGCGCCTGGCGCCTTGATTGGCCACCACACTGAGAACCACCGTCGGATGGCGACCGA
TAGGCTGATGTCACAAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MENKKALLKPKRSGLFQAKATLNSKSRPHPADQHVGRQIATVRLQSDVSQAQLARAIGVSFQQLQKYENARNRVSASMLY
EIARSLDVPVSRFFEGLLGNEISGETSPLPIDERIEFIASAEGRRLIEGLMRLHPRVRSRVGSDLCIGRRIGFIRPEERQ
RHGRLSRLGSPSAINTRRGWPATGAAFAEAFGRPRSAFRAWLLAFGLHLPKSRVS

Sequences:

>Translated_215_residues
MENKKALLKPKRSGLFQAKATLNSKSRPHPADQHVGRQIATVRLQSDVSQAQLARAIGVSFQQLQKYENARNRVSASMLY
EIARSLDVPVSRFFEGLLGNEISGETSPLPIDERIEFIASAEGRRLIEGLMRLHPRVRSRVGSDLCIGRRIGFIRPEERQ
RHGRLSRLGSPSAINTRRGWPATGAAFAEAFGRPRSAFRAWLLAFGLHLPKSRVS
>Mature_215_residues
MENKKALLKPKRSGLFQAKATLNSKSRPHPADQHVGRQIATVRLQSDVSQAQLARAIGVSFQQLQKYENARNRVSASMLY
EIARSLDVPVSRFFEGLLGNEISGETSPLPIDERIEFIASAEGRRLIEGLMRLHPRVRSRVGSDLCIGRRIGFIRPEERQ
RHGRLSRLGSPSAINTRRGWPATGAAFAEAFGRPRSAFRAWLLAFGLHLPKSRVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 24018; Mature: 24018

Theoretical pI: Translated: 12.04; Mature: 12.04

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKKALLKPKRSGLFQAKATLNSKSRPHPADQHVGRQIATVRLQSDVSQAQLARAIGVS
CCCCCCHHCHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQQLQKYENARNRVSASMLYEIARSLDVPVSRFFEGLLGNEISGETSPLPIDERIEFIAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
AEGRRLIEGLMRLHPRVRSRVGSDLCIGRRIGFIRPEERQRHGRLSRLGSPSAINTRRGW
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PATGAAFAEAFGRPRSAFRAWLLAFGLHLPKSRVS
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MENKKALLKPKRSGLFQAKATLNSKSRPHPADQHVGRQIATVRLQSDVSQAQLARAIGVS
CCCCCCHHCHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQQLQKYENARNRVSASMLYEIARSLDVPVSRFFEGLLGNEISGETSPLPIDERIEFIAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
AEGRRLIEGLMRLHPRVRSRVGSDLCIGRRIGFIRPEERQRHGRLSRLGSPSAINTRRGW
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PATGAAFAEAFGRPRSAFRAWLLAFGLHLPKSRVS
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]