Click here to switch to the map view.

The map label for this gene is 13475196

Identifier: 13475196

GI number: 13475196

Start: 5037536

End: 5038411

Strand: Reverse

Name: 13475196

Synonym: mll6220

Alternate gene names: NA

Gene position: 5038411-5037536 (Counterclockwise)

Preceding gene: 13475197

Following gene: 13475191

Centisome position: 71.61

GC content: 63.81

Gene sequence:

>876_bases
ATGCCGAGATTATCACCATCGCCGCGACACCAGATTCTCATCCAGATTGTCGCGCGCTTCTCTCCCAGATTGTCGCGCTA
TACCATCCCATGGCACGATCACTGCCGCGCGGCGAAGAAGCGGTCCCGGGCGATCGAATATACCCGCGGTCGCCCGAAAC
GGGTGAAGCACTACCGCGAGCTGCTCAGGATCACACGCACCACCTTGGGCTATCTCCAGCAGGCGGCTGAGCAACCGACC
CTGGCGGCGAGCCCGGCCGTTGAACTGTGGCAGGCCCAAGTCCGCCACTACTGGCCGCTGATCGAGCGGATCATCGCCCA
GACCGAACGGCGGGTCCTGGCAGGCGAGCCGGTCCCGGCCGGCGAGAAGCTGGTGAGCCTGTTCGAGCCGCATGCCGATA
TCATCGTCAAGGGCAGCCGCGACGTCGATTATGGTCACAAGATCAATCTGACCACCGGTCGCAGCGGACTGATCCTCGAT
CTCGTCATCGAAGCGGGCAACCCAGCCGACAGCGAGCGTCTGCTGCTAATGCTGGAGCGCCACATCGCGTTTTACGGCGA
GCCGCCGCGTCAGGCGGCGGCCGACGGCGGCTATGCCAGCCGCGCCAATCTGCGCCAAGCCAAGGCTTGGGGCGTGCGCG
ATATGGCGTTCCACAAGAAGAGCGCCCTCAGGATCGAAGACATGGTCAGCAGCCGCTGGGTCTATCGCAAGCTGCGCAAC
TTCCGCGCTGGTATCGAGGCCAGCATCTCCTGCCTGAAGCGCGCCTATGGCTTGGCCCGCTGCACCTGGCGCGGGCTCAA
CCACTTCAAGGCTTACGTCTGGTCCTCGGTGGTCGCTTACAATCTCGCCCTCTTCACCCGCCTCAAATCGACCTGA

Upstream 100 bases:

>100_bases
GGCCAGGCAGGCCGGCGTCATATGCGACGCCCGCAAACGTCGCTCCTGATTGACGCGCCGCGACAATCAAACCGATAAAA
CCTCTTGCGCGCGACAATCA

Downstream 100 bases:

>100_bases
CCCCCAGTCATCGGGCTGCGTTCAGGAGCACGCCGGCCAGCGCCGGCCGATACCCCTATGACCCCAATGCCGCCAGATCG
ACCCCCGGCCGCAACCTCCA

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase And Inactivated Derivatives; Methyl-Accepting Chemotaxis Sensory Transducer

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MPRLSPSPRHQILIQIVARFSPRLSRYTIPWHDHCRAAKKRSRAIEYTRGRPKRVKHYRELLRITRTTLGYLQQAAEQPT
LAASPAVELWQAQVRHYWPLIERIIAQTERRVLAGEPVPAGEKLVSLFEPHADIIVKGSRDVDYGHKINLTTGRSGLILD
LVIEAGNPADSERLLLMLERHIAFYGEPPRQAAADGGYASRANLRQAKAWGVRDMAFHKKSALRIEDMVSSRWVYRKLRN
FRAGIEASISCLKRAYGLARCTWRGLNHFKAYVWSSVVAYNLALFTRLKST

Sequences:

>Translated_291_residues
MPRLSPSPRHQILIQIVARFSPRLSRYTIPWHDHCRAAKKRSRAIEYTRGRPKRVKHYRELLRITRTTLGYLQQAAEQPT
LAASPAVELWQAQVRHYWPLIERIIAQTERRVLAGEPVPAGEKLVSLFEPHADIIVKGSRDVDYGHKINLTTGRSGLILD
LVIEAGNPADSERLLLMLERHIAFYGEPPRQAAADGGYASRANLRQAKAWGVRDMAFHKKSALRIEDMVSSRWVYRKLRN
FRAGIEASISCLKRAYGLARCTWRGLNHFKAYVWSSVVAYNLALFTRLKST
>Mature_290_residues
PRLSPSPRHQILIQIVARFSPRLSRYTIPWHDHCRAAKKRSRAIEYTRGRPKRVKHYRELLRITRTTLGYLQQAAEQPTL
AASPAVELWQAQVRHYWPLIERIIAQTERRVLAGEPVPAGEKLVSLFEPHADIIVKGSRDVDYGHKINLTTGRSGLILDL
VIEAGNPADSERLLLMLERHIAFYGEPPRQAAADGGYASRANLRQAKAWGVRDMAFHKKSALRIEDMVSSRWVYRKLRNF
RAGIEASISCLKRAYGLARCTWRGLNHFKAYVWSSVVAYNLALFTRLKST

Specific function: Unknown

COG id: COG3039

COG function: function code L; Transposase and inactivated derivatives, IS5 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33316; Mature: 33185

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLSPSPRHQILIQIVARFSPRLSRYTIPWHDHCRAAKKRSRAIEYTRGRPKRVKHYRE
CCCCCCCHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LLRITRTTLGYLQQAAEQPTLAASPAVELWQAQVRHYWPLIERIIAQTERRVLAGEPVPA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GEKLVSLFEPHADIIVKGSRDVDYGHKINLTTGRSGLILDLVIEAGNPADSERLLLMLER
HHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHH
HIAFYGEPPRQAAADGGYASRANLRQAKAWGVRDMAFHKKSALRIEDMVSSRWVYRKLRN
HHHHCCCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRAGIEASISCLKRAYGLARCTWRGLNHFKAYVWSSVVAYNLALFTRLKST
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRLSPSPRHQILIQIVARFSPRLSRYTIPWHDHCRAAKKRSRAIEYTRGRPKRVKHYRE
CCCCCCHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LLRITRTTLGYLQQAAEQPTLAASPAVELWQAQVRHYWPLIERIIAQTERRVLAGEPVPA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GEKLVSLFEPHADIIVKGSRDVDYGHKINLTTGRSGLILDLVIEAGNPADSERLLLMLER
HHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHH
HIAFYGEPPRQAAADGGYASRANLRQAKAWGVRDMAFHKKSALRIEDMVSSRWVYRKLRN
HHHHCCCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRAGIEASISCLKRAYGLARCTWRGLNHFKAYVWSSVVAYNLALFTRLKST
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA