| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475177
Identifier: 13475177
GI number: 13475177
Start: 5015986
End: 5016510
Strand: Reverse
Name: 13475177
Synonym: mll6195
Alternate gene names: NA
Gene position: 5016510-5015986 (Counterclockwise)
Preceding gene: 13475181
Following gene: 13475176
Centisome position: 71.3
GC content: 56.0
Gene sequence:
>525_bases GTGTATCGCCAATATTTTCGTATTGCTCTAATCGATTATAGTTGTGAAGCGCAATTTCAGCCCGTTTACTTGCCGCTCAA GTCACGCATAAAAGAAGGTAGCACCGATTCGGTAGCTTATCCCCTGTCTTTTGCGTACTCGCGGCCCGTGGCGCCGAGTG GACGATTGAAGATCGCCGGTCTCACTAGCAGGTGGGCACAAGCGCCTGGGGCCGGTTGGCAAGCCACAGGAGTAGGACAA ATGTCGAAGGATTCGGGTAAGGGCGATCACGGCGGCAAGATCGAGATCACGGTGGTGGTGAACGGCCAGCCCACGCAGGT CGAAGCCAATCCCAACCAGCCGCTTCACGTCGTTCGTGCCAAAGCCCTTGAGAACACGCAGAACGTCGCCCAGCCGGCCG AGAATTGGGAATTCAAGGATGAGGCCGGCAACCTGCTCGACGTTGACAAAAAAGTTGGCGATTTCGGTTTCGCGAACATT GTGACCCTGTTCCTCAGCCTGAAGGCGGGTGTAGCAGGTGCCTGA
Upstream 100 bases:
>100_bases GGTCACAGCGCCCGCCCAATCGAACCTGAAATCATACCGGCAGGCGGACTTGCACGGGGGCTGTCAGTGGAGCAGGCGCG TGAAAGAGCACATGAAATAG
Downstream 100 bases:
>100_bases AATCCAGACTGTGGACCCTGCGGTCTCGCGAGCGAAATTCGATCGGCAGATCGGCTGGTTCCAAACACAAGCGGGCGCTT ACCGGGCTCAGGGTTGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MYRQYFRIALIDYSCEAQFQPVYLPLKSRIKEGSTDSVAYPLSFAYSRPVAPSGRLKIAGLTSRWAQAPGAGWQATGVGQ MSKDSGKGDHGGKIEITVVVNGQPTQVEANPNQPLHVVRAKALENTQNVAQPAENWEFKDEAGNLLDVDKKVGDFGFANI VTLFLSLKAGVAGA
Sequences:
>Translated_174_residues MYRQYFRIALIDYSCEAQFQPVYLPLKSRIKEGSTDSVAYPLSFAYSRPVAPSGRLKIAGLTSRWAQAPGAGWQATGVGQ MSKDSGKGDHGGKIEITVVVNGQPTQVEANPNQPLHVVRAKALENTQNVAQPAENWEFKDEAGNLLDVDKKVGDFGFANI VTLFLSLKAGVAGA >Mature_174_residues MYRQYFRIALIDYSCEAQFQPVYLPLKSRIKEGSTDSVAYPLSFAYSRPVAPSGRLKIAGLTSRWAQAPGAGWQATGVGQ MSKDSGKGDHGGKIEITVVVNGQPTQVEANPNQPLHVVRAKALENTQNVAQPAENWEFKDEAGNLLDVDKKVGDFGFANI VTLFLSLKAGVAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019726 [H]
Pfam domain/function: PF10790 DUF2604 [H]
EC number: NA
Molecular weight: Translated: 18783; Mature: 18783
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRQYFRIALIDYSCEAQFQPVYLPLKSRIKEGSTDSVAYPLSFAYSRPVAPSGRLKIAG CCCCEEEEEEEEECCCCCCCEEEEEHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEE LTSRWAQAPGAGWQATGVGQMSKDSGKGDHGGKIEITVVVNGQPTQVEANPNQPLHVVRA CCHHHHCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCHHHHH KALENTQNVAQPAENWEFKDEAGNLLDVDKKVGDFGFANIVTLFLSLKAGVAGA HHHHHHHHHCCCCCCCCCCCCCCCEEECCHHCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MYRQYFRIALIDYSCEAQFQPVYLPLKSRIKEGSTDSVAYPLSFAYSRPVAPSGRLKIAG CCCCEEEEEEEEECCCCCCCEEEEEHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEE LTSRWAQAPGAGWQATGVGQMSKDSGKGDHGGKIEITVVVNGQPTQVEANPNQPLHVVRA CCHHHHCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCHHHHH KALENTQNVAQPAENWEFKDEAGNLLDVDKKVGDFGFANIVTLFLSLKAGVAGA HHHHHHHHHCCCCCCCCCCCCCCCEEECCHHCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]