Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475177

Identifier: 13475177

GI number: 13475177

Start: 5015986

End: 5016510

Strand: Reverse

Name: 13475177

Synonym: mll6195

Alternate gene names: NA

Gene position: 5016510-5015986 (Counterclockwise)

Preceding gene: 13475181

Following gene: 13475176

Centisome position: 71.3

GC content: 56.0

Gene sequence:

>525_bases
GTGTATCGCCAATATTTTCGTATTGCTCTAATCGATTATAGTTGTGAAGCGCAATTTCAGCCCGTTTACTTGCCGCTCAA
GTCACGCATAAAAGAAGGTAGCACCGATTCGGTAGCTTATCCCCTGTCTTTTGCGTACTCGCGGCCCGTGGCGCCGAGTG
GACGATTGAAGATCGCCGGTCTCACTAGCAGGTGGGCACAAGCGCCTGGGGCCGGTTGGCAAGCCACAGGAGTAGGACAA
ATGTCGAAGGATTCGGGTAAGGGCGATCACGGCGGCAAGATCGAGATCACGGTGGTGGTGAACGGCCAGCCCACGCAGGT
CGAAGCCAATCCCAACCAGCCGCTTCACGTCGTTCGTGCCAAAGCCCTTGAGAACACGCAGAACGTCGCCCAGCCGGCCG
AGAATTGGGAATTCAAGGATGAGGCCGGCAACCTGCTCGACGTTGACAAAAAAGTTGGCGATTTCGGTTTCGCGAACATT
GTGACCCTGTTCCTCAGCCTGAAGGCGGGTGTAGCAGGTGCCTGA

Upstream 100 bases:

>100_bases
GGTCACAGCGCCCGCCCAATCGAACCTGAAATCATACCGGCAGGCGGACTTGCACGGGGGCTGTCAGTGGAGCAGGCGCG
TGAAAGAGCACATGAAATAG

Downstream 100 bases:

>100_bases
AATCCAGACTGTGGACCCTGCGGTCTCGCGAGCGAAATTCGATCGGCAGATCGGCTGGTTCCAAACACAAGCGGGCGCTT
ACCGGGCTCAGGGTTGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MYRQYFRIALIDYSCEAQFQPVYLPLKSRIKEGSTDSVAYPLSFAYSRPVAPSGRLKIAGLTSRWAQAPGAGWQATGVGQ
MSKDSGKGDHGGKIEITVVVNGQPTQVEANPNQPLHVVRAKALENTQNVAQPAENWEFKDEAGNLLDVDKKVGDFGFANI
VTLFLSLKAGVAGA

Sequences:

>Translated_174_residues
MYRQYFRIALIDYSCEAQFQPVYLPLKSRIKEGSTDSVAYPLSFAYSRPVAPSGRLKIAGLTSRWAQAPGAGWQATGVGQ
MSKDSGKGDHGGKIEITVVVNGQPTQVEANPNQPLHVVRAKALENTQNVAQPAENWEFKDEAGNLLDVDKKVGDFGFANI
VTLFLSLKAGVAGA
>Mature_174_residues
MYRQYFRIALIDYSCEAQFQPVYLPLKSRIKEGSTDSVAYPLSFAYSRPVAPSGRLKIAGLTSRWAQAPGAGWQATGVGQ
MSKDSGKGDHGGKIEITVVVNGQPTQVEANPNQPLHVVRAKALENTQNVAQPAENWEFKDEAGNLLDVDKKVGDFGFANI
VTLFLSLKAGVAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019726 [H]

Pfam domain/function: PF10790 DUF2604 [H]

EC number: NA

Molecular weight: Translated: 18783; Mature: 18783

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRQYFRIALIDYSCEAQFQPVYLPLKSRIKEGSTDSVAYPLSFAYSRPVAPSGRLKIAG
CCCCEEEEEEEEECCCCCCCEEEEEHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEE
LTSRWAQAPGAGWQATGVGQMSKDSGKGDHGGKIEITVVVNGQPTQVEANPNQPLHVVRA
CCHHHHCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCHHHHH
KALENTQNVAQPAENWEFKDEAGNLLDVDKKVGDFGFANIVTLFLSLKAGVAGA
HHHHHHHHHCCCCCCCCCCCCCCCEEECCHHCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MYRQYFRIALIDYSCEAQFQPVYLPLKSRIKEGSTDSVAYPLSFAYSRPVAPSGRLKIAG
CCCCEEEEEEEEECCCCCCCEEEEEHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEE
LTSRWAQAPGAGWQATGVGQMSKDSGKGDHGGKIEITVVVNGQPTQVEANPNQPLHVVRA
CCHHHHCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCHHHHH
KALENTQNVAQPAENWEFKDEAGNLLDVDKKVGDFGFANIVTLFLSLKAGVAGA
HHHHHHHHHCCCCCCCCCCCCCCCEEECCHHCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]