| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475162
Identifier: 13475162
GI number: 13475162
Start: 4998587
End: 4999489
Strand: Direct
Name: 13475162
Synonym: mlr6178
Alternate gene names: NA
Gene position: 4998587-4999489 (Clockwise)
Preceding gene: 13475161
Following gene: 13475164
Centisome position: 71.04
GC content: 63.46
Gene sequence:
>903_bases ATGCCCATCATTTCGGACCTCGCGAATCAACGCACGGTAGAAGCCAGTCAGCCGAGAATGACGCCCGTTTCATGGAAGGA AAGCCAAGCCATGCGCGAAGCATCGCCCCGCTTTGCACTCGATTATTTGGCGACGCCCGGACTTGACGTCAGGGCACTTT TCGCTTTTGCCCGCGACCAGGGCCTAACCGATGTCCAGATCCGCAGCCAACCGGGCAGCAATGCTATTGCACGCGGCATG CCGGCGGCGGACGTCCGGTCTGCGGCCGCCGACACAGGCGTTGGGATTATTTCCGTCAATGCCCTCCAGCGCTTCAATGA GTGGACCCCCGCCCGCAGGGCCGAGGCGAGCAAGCTCGCCGATTATGCAGCGGCCTGCGGAGCCAAGACGCTCATGCTGG TGCCGGTCAACGATGGCTCCTGGCCCGCCAATGTCGAGCGCCGGGGCGATCTCCGCGTCGCCTTGAAGGCGCTCAAGCCG ATCCTCCAGTCGCGCGGTCTGATCGGTCTCATCGAGCCGCTGGGCTTCCGGACCTGCTCGCTTCGATCGAAGAACGAAGC GGCTAAGGCCATTGCCGCCATTGATGGCCAATCCGTCTTCCGCCTCGTGCACGACACGTTCCACCACACGCTTGCCGGGG AGACGTTCTTCTCCTCCGAGCTGACCGGTCTCGTCCACATTTCAAGCGTGAACGATCCGATCCACTGGATTTACCCGGAT CGCGTCCTGGTCGGTTCCGACAATGGCAGCCAGATCCGGGCGCTGCTTGATGGCGGCTATGGGGGGCCCTTCTCATTCGC ACCGTTTGTCGACGCAGCCCACCCGCTGGACGACCTCGCAGGCGCACTTGCCGCGAGCGTCGCTCTCTTCCGACACGGGC TATTGACGCGAGTGCCGGCGTGA
Upstream 100 bases:
>100_bases CTCAGGAGGCGCGGCACCGCCGTTTGGGTGAACGTCGGCTCATAAATGAGAGAAAAACATAGCGTGAGAGAAACGTGAGT ACGACTGCCTCGCCTCGCTC
Downstream 100 bases:
>100_bases GACGCGGGAGTAAATTAGGGCTGCCTGGGGCGCCTTTTGGCGTCCCCCGGAGAAGTCATTCGAGACGCCTCCTGTAGCAA TATCTCTCGCAGCCAGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; IolI Protein; Cytoplasmic Protein; Myo-Inositol Catabolism Protein; Sugar Epimerase; Sugar Epimerase Protein; Xylose Isomerase-Like TIM Barrel; Protein IolI; Protein Implicated IN Myo-Inositol Catabolique Pathway; Protein Implicated In Myo-Inositol Catabolique Pathway; IolL Protein; Myo-Inositol Catabolism Protein IolI
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MPIISDLANQRTVEASQPRMTPVSWKESQAMREASPRFALDYLATPGLDVRALFAFARDQGLTDVQIRSQPGSNAIARGM PAADVRSAAADTGVGIISVNALQRFNEWTPARRAEASKLADYAAACGAKTLMLVPVNDGSWPANVERRGDLRVALKALKP ILQSRGLIGLIEPLGFRTCSLRSKNEAAKAIAAIDGQSVFRLVHDTFHHTLAGETFFSSELTGLVHISSVNDPIHWIYPD RVLVGSDNGSQIRALLDGGYGGPFSFAPFVDAAHPLDDLAGALAASVALFRHGLLTRVPA
Sequences:
>Translated_300_residues MPIISDLANQRTVEASQPRMTPVSWKESQAMREASPRFALDYLATPGLDVRALFAFARDQGLTDVQIRSQPGSNAIARGM PAADVRSAAADTGVGIISVNALQRFNEWTPARRAEASKLADYAAACGAKTLMLVPVNDGSWPANVERRGDLRVALKALKP ILQSRGLIGLIEPLGFRTCSLRSKNEAAKAIAAIDGQSVFRLVHDTFHHTLAGETFFSSELTGLVHISSVNDPIHWIYPD RVLVGSDNGSQIRALLDGGYGGPFSFAPFVDAAHPLDDLAGALAASVALFRHGLLTRVPA >Mature_299_residues PIISDLANQRTVEASQPRMTPVSWKESQAMREASPRFALDYLATPGLDVRALFAFARDQGLTDVQIRSQPGSNAIARGMP AADVRSAAADTGVGIISVNALQRFNEWTPARRAEASKLADYAAACGAKTLMLVPVNDGSWPANVERRGDLRVALKALKPI LQSRGLIGLIEPLGFRTCSLRSKNEAAKAIAAIDGQSVFRLVHDTFHHTLAGETFFSSELTGLVHISSVNDPIHWIYPDR VLVGSDNGSQIRALLDGGYGGPFSFAPFVDAAHPLDDLAGALAASVALFRHGLLTRVPA
Specific function: Unknown
COG id: COG4130
COG function: function code G; Predicted sugar epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32120; Mature: 31989
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIISDLANQRTVEASQPRMTPVSWKESQAMREASPRFALDYLATPGLDVRALFAFARDQ CCCHHHHHCCCEECCCCCCCCCCCCHHHHHHHHCCCCEEEHHHCCCCCCHHHHHHHHHCC GLTDVQIRSQPGSNAIARGMPAADVRSAAADTGVGIISVNALQRFNEWTPARRAEASKLA CCCEEEEECCCCCCHHHCCCCHHHHHHHHHHCCCEEEEHHHHHHHHCCCCHHHHHHHHHH DYAAACGAKTLMLVPVNDGSWPANVERRGDLRVALKALKPILQSRGLIGLIEPLGFRTCS HHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEC LRSKNEAAKAIAAIDGQSVFRLVHDTFHHTLAGETFFSSELTGLVHISSVNDPIHWIYPD CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCEEEEECC RVLVGSDNGSQIRALLDGGYGGPFSFAPFVDAAHPLDDLAGALAASVALFRHGLLTRVPA EEEEECCCCCEEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PIISDLANQRTVEASQPRMTPVSWKESQAMREASPRFALDYLATPGLDVRALFAFARDQ CCHHHHHCCCEECCCCCCCCCCCCHHHHHHHHCCCCEEEHHHCCCCCCHHHHHHHHHCC GLTDVQIRSQPGSNAIARGMPAADVRSAAADTGVGIISVNALQRFNEWTPARRAEASKLA CCCEEEEECCCCCCHHHCCCCHHHHHHHHHHCCCEEEEHHHHHHHHCCCCHHHHHHHHHH DYAAACGAKTLMLVPVNDGSWPANVERRGDLRVALKALKPILQSRGLIGLIEPLGFRTCS HHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCEEEC LRSKNEAAKAIAAIDGQSVFRLVHDTFHHTLAGETFFSSELTGLVHISSVNDPIHWIYPD CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCEEEEECC RVLVGSDNGSQIRALLDGGYGGPFSFAPFVDAAHPLDDLAGALAASVALFRHGLLTRVPA EEEEECCCCCEEEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA