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The map label for this gene is nodA [H]

Identifier: 13475149

GI number: 13475149

Start: 4986741

End: 4987463

Strand: Direct

Name: nodA [H]

Synonym: mlr8755

Alternate gene names: 13475149

Gene position: 4986741-4987463 (Clockwise)

Preceding gene: 13475148

Following gene: 13475150

Centisome position: 70.87

GC content: 58.37

Gene sequence:

>723_bases
GTGGATGCTCGCGATCTAAACAATCAATTTTACCAATCCGGGAGGGCCGTTCATAGACCCATGACATGCACCGCCATTGC
TCTATCGCGTGGGGTGCACAAAAGAACCCGAAAAAGAGGAAGTCTTCGCATGCGCCCTGACGTGCAGTGGAGGTTATGCT
GGGAAAATGAGTTGCAGCTTCCCGATCACCTCGAACTCTCTGAGTTCTTCCGGAAGACCTATGAGCCGACCGGAGCCTTT
AATGGGAAGCAATTCGCAGGCGGTCGAAGTTGGGCCGGTGCAAGGCCGGAGCTCCGCGTAATCGGCCGTGATGTGCACGG
GGTAGCGGCTCACTTGGGCCTGCTGCGCCGATACATCAAAGTTGGCGACGATGATCTGCTTGTCGCTGAACTCGGTCTAT
ACGGGGTGCGTCCGGATCTTGAGGGGCTGGGAATCGCCCATTCGATCAGCGTGATGTATCCGGTGCTGCAGCAGCTTGGC
GTTCCATTCGCGTTCGGCTCGGTGCGGCCCGCGCTCCGGAACCATGTTTCGAGGTTCTGCCGCAAAGGCTTGGCGAACAT
TTTGTCGGGCGTTCGCGTGCGTTCAACCCACCCGGACGTGTACCTCGATCTGCCTCCCACGCGAGTCGACGACAACGTAC
TCGTCCTGGTGCTCCCAATTGGACGCTCAATGAGCGAGTGGCCGGCCGGCACTTTGATCGATCGGAACGGTCCAGAGCTA
TGA

Upstream 100 bases:

>100_bases
CACCGACAGCTGCCATCGGTGCCGCCGCTTATCGGGCCAATCGAGCACGACCAGAAGGTTCAGATCAGGCTTTGAAAGGC
ATGGTTTTAACATCCATAGC

Downstream 100 bases:

>100_bases
AGGACGCCCGCTACGACGTCAGTCAGCGCGACCCGCCCCCATGGCGTTGATCGAGCTGATTCCAGCATTGGCCGCGGTTT
TACTATCCGCCCGCTTCCCT

Product: acyltransferase NodA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MDARDLNNQFYQSGRAVHRPMTCTAIALSRGVHKRTRKRGSLRMRPDVQWRLCWENELQLPDHLELSEFFRKTYEPTGAF
NGKQFAGGRSWAGARPELRVIGRDVHGVAAHLGLLRRYIKVGDDDLLVAELGLYGVRPDLEGLGIAHSISVMYPVLQQLG
VPFAFGSVRPALRNHVSRFCRKGLANILSGVRVRSTHPDVYLDLPPTRVDDNVLVLVLPIGRSMSEWPAGTLIDRNGPEL

Sequences:

>Translated_240_residues
MDARDLNNQFYQSGRAVHRPMTCTAIALSRGVHKRTRKRGSLRMRPDVQWRLCWENELQLPDHLELSEFFRKTYEPTGAF
NGKQFAGGRSWAGARPELRVIGRDVHGVAAHLGLLRRYIKVGDDDLLVAELGLYGVRPDLEGLGIAHSISVMYPVLQQLG
VPFAFGSVRPALRNHVSRFCRKGLANILSGVRVRSTHPDVYLDLPPTRVDDNVLVLVLPIGRSMSEWPAGTLIDRNGPEL
>Mature_240_residues
MDARDLNNQFYQSGRAVHRPMTCTAIALSRGVHKRTRKRGSLRMRPDVQWRLCWENELQLPDHLELSEFFRKTYEPTGAF
NGKQFAGGRSWAGARPELRVIGRDVHGVAAHLGLLRRYIKVGDDDLLVAELGLYGVRPDLEGLGIAHSISVMYPVLQQLG
VPFAFGSVRPALRNHVSRFCRKGLANILSGVRVRSTHPDVYLDLPPTRVDDNVLVLVLPIGRSMSEWPAGTLIDRNGPEL

Specific function: N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nodA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003484
- InterPro:   IPR020567 [H]

Pfam domain/function: PF02474 NodA [H]

EC number: NA

Molecular weight: Translated: 26909; Mature: 26909

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS01349 NODA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARDLNNQFYQSGRAVHRPMTCTAIALSRGVHKRTRKRGSLRMRPDVQWRLCWENELQL
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCCC
PDHLELSEFFRKTYEPTGAFNGKQFAGGRSWAGARPELRVIGRDVHGVAAHLGLLRRYIK
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
VGDDDLLVAELGLYGVRPDLEGLGIAHSISVMYPVLQQLGVPFAFGSVRPALRNHVSRFC
CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHH
RKGLANILSGVRVRSTHPDVYLDLPPTRVDDNVLVLVLPIGRSMSEWPAGTLIDRNGPEL
HHHHHHHHCCCEEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MDARDLNNQFYQSGRAVHRPMTCTAIALSRGVHKRTRKRGSLRMRPDVQWRLCWENELQL
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCCC
PDHLELSEFFRKTYEPTGAFNGKQFAGGRSWAGARPELRVIGRDVHGVAAHLGLLRRYIK
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
VGDDDLLVAELGLYGVRPDLEGLGIAHSISVMYPVLQQLGVPFAFGSVRPALRNHVSRFC
CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHH
RKGLANILSGVRVRSTHPDVYLDLPPTRVDDNVLVLVLPIGRSMSEWPAGTLIDRNGPEL
HHHHHHHHCCCEEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8850088; 11214968 [H]