| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475144
Identifier: 13475144
GI number: 13475144
Start: 4979387
End: 4980016
Strand: Direct
Name: 13475144
Synonym: mlr6156
Alternate gene names: NA
Gene position: 4979387-4980016 (Clockwise)
Preceding gene: 13475143
Following gene: 13475145
Centisome position: 70.77
GC content: 66.03
Gene sequence:
>630_bases ATGAGCGCGCGCGATCCCGACACCCTGCGGACCGAGCCAACGCCGCAAGGCGAGCAGACGCTCATTCCCGGTGTCCAGCC ACCACGCGCGACCGCCTCGCCCTTTTGGCCGACGCGCCGATGCGCCCACGCGCGGCGCAAAAGCCGCTCGATATCGGGCT GTTCGATGACGCCAGAAATCAACGCGACCTGTTTTGAGAGGAGTTTTCCCATGATCCTGATCACCGACGACCTTCGCGCC CCGCTGCTCGCCAATGGCGCAACCGACACTGAAACCGACCATGTCCCGGTGGTCAAACTGTTCGATCCGACCGGGCCAGC AACCTGGCTTCTCACCGAACTCGACGCCGACGGCGACACCCTTTTCGGCCTTTGCGACCTCGGCTTCGGCTTCCCCGAAC TCGGCAGCGTCAGTCTTGCCGAGCTTGCAAGCGTCAAGGGGCGGCTTGGCCTCGGCATCGAGCGCGACCTCTGGTTCAAG GCGCGCTTTCCGCTCTCCGTCTACGCGCAGGCAGCGTGCAGCGCCGGCCACATCACCGAAGCCGAGCGGCTGCTGCGACA GGCGGCAGAGGCCCTTGGCAACGCCCATTCCAAGCTTCCGCTCGACACGGCGGAACAGACGCGCCGCTAG
Upstream 100 bases:
>100_bases GCGCCATCTTCCGCGCCGCCAGCCTTGCCTCCAAGGCCGCCGATTTTCTTCTGGGCTTCAACGCCGAGGCCGAAGGCGCG CAACAAGACGAGATCGCGGC
Downstream 100 bases:
>100_bases GCGCGAAAACCGTCCCGCCGCGCCGGCTTGCAGCCTCTGCGGCGGGGCAATCCCACCCCGCAACGAAGGAGACAAACCAT GCAACTTGCCCACATTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transposon
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSARDPDTLRTEPTPQGEQTLIPGVQPPRATASPFWPTRRCAHARRKSRSISGCSMTPEINATCFERSFPMILITDDLRA PLLANGATDTETDHVPVVKLFDPTGPATWLLTELDADGDTLFGLCDLGFGFPELGSVSLAELASVKGRLGLGIERDLWFK ARFPLSVYAQAACSAGHITEAERLLRQAAEALGNAHSKLPLDTAEQTRR
Sequences:
>Translated_209_residues MSARDPDTLRTEPTPQGEQTLIPGVQPPRATASPFWPTRRCAHARRKSRSISGCSMTPEINATCFERSFPMILITDDLRA PLLANGATDTETDHVPVVKLFDPTGPATWLLTELDADGDTLFGLCDLGFGFPELGSVSLAELASVKGRLGLGIERDLWFK ARFPLSVYAQAACSAGHITEAERLLRQAAEALGNAHSKLPLDTAEQTRR >Mature_208_residues SARDPDTLRTEPTPQGEQTLIPGVQPPRATASPFWPTRRCAHARRKSRSISGCSMTPEINATCFERSFPMILITDDLRAP LLANGATDTETDHVPVVKLFDPTGPATWLLTELDADGDTLFGLCDLGFGFPELGSVSLAELASVKGRLGLGIERDLWFKA RFPLSVYAQAACSAGHITEAERLLRQAAEALGNAHSKLPLDTAEQTRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22685; Mature: 22554
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARDPDTLRTEPTPQGEQTLIPGVQPPRATASPFWPTRRCAHARRKSRSISGCSMTPEI CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC NATCFERSFPMILITDDLRAPLLANGATDTETDHVPVVKLFDPTGPATWLLTELDADGDT CCEEECCCCCEEEEECCCCCCEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCE LFGLCDLGFGFPELGSVSLAELASVKGRLGLGIERDLWFKARFPLSVYAQAACSAGHITE EEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCHHH AERLLRQAAEALGNAHSKLPLDTAEQTRR HHHHHHHHHHHHCCCCCCCCCCCHHHHCC >Mature Secondary Structure SARDPDTLRTEPTPQGEQTLIPGVQPPRATASPFWPTRRCAHARRKSRSISGCSMTPEI CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC NATCFERSFPMILITDDLRAPLLANGATDTETDHVPVVKLFDPTGPATWLLTELDADGDT CCEEECCCCCEEEEECCCCCCEEECCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCE LFGLCDLGFGFPELGSVSLAELASVKGRLGLGIERDLWFKARFPLSVYAQAACSAGHITE EEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCHHH AERLLRQAAEALGNAHSKLPLDTAEQTRR HHHHHHHHHHHHCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA