| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475139
Identifier: 13475139
GI number: 13475139
Start: 4976739
End: 4977161
Strand: Reverse
Name: 13475139
Synonym: mll6151
Alternate gene names: NA
Gene position: 4977161-4976739 (Counterclockwise)
Preceding gene: 13475140
Following gene: 13475136
Centisome position: 70.74
GC content: 63.59
Gene sequence:
>423_bases TTGCCGGCCCAATGGATCGATGATGACTGCCTGCAGGAACTGCGCTGGATGTATGACCGGCGCGACCTTTCCGAAATGCG GCGCGACCTCGCCCAATGGCTGGCCAAGTGGGAGACGCGCTGCCCCAAGCTGTGCCAGTGGGCGGAGGACAACGTCGAGG AGACGCTCACCTTCAACCGGCTGCCACGCCAGCATCACAACAGCCTGAAGAGCGCCAACAGCCTGGAGCGGCTCAATCAG GAGATCAAGCGGCGCACCCATGTGGTGCGCATCTTTCCCAGCGCCGAGAACTGCCTGCGGCTCGTCCGCGCGCTCGCCGT CGAAACACACGAAAACTGCTGGAGGCGATTCGCTATCTCAACAGGGAGCACCTGGCCGAGCAAGGAGATGCCGCGCAAGC TGGAGGAGCCCAAGGCCTCCTGA
Upstream 100 bases:
>100_bases GCTTGAACCATGCGACGATGGCCTTGAGCCCTTTCGGCTGGGCGCCGCGCTTGAGAAGGCGTCATAGGCACGGCCGGCTT CGATCTGCTCGCGAGACATC
Downstream 100 bases:
>100_bases CGGCGGCGGGCGGGCTGGGCGCTTGCGTTACTTGAAGACGCCGCGCCTGACCCGCCAACACCGGCGACCGTGATCGCAAA TTTGCAGAAGACTCTCGACA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPAQWIDDDCLQELRWMYDRRDLSEMRRDLAQWLAKWETRCPKLCQWAEDNVEETLTFNRLPRQHHNSLKSANSLERLNQ EIKRRTHVVRIFPSAENCLRLVRALAVETHENCWRRFAISTGSTWPSKEMPRKLEEPKAS
Sequences:
>Translated_140_residues MPAQWIDDDCLQELRWMYDRRDLSEMRRDLAQWLAKWETRCPKLCQWAEDNVEETLTFNRLPRQHHNSLKSANSLERLNQ EIKRRTHVVRIFPSAENCLRLVRALAVETHENCWRRFAISTGSTWPSKEMPRKLEEPKAS >Mature_139_residues PAQWIDDDCLQELRWMYDRRDLSEMRRDLAQWLAKWETRCPKLCQWAEDNVEETLTFNRLPRQHHNSLKSANSLERLNQE IKRRTHVVRIFPSAENCLRLVRALAVETHENCWRRFAISTGSTWPSKEMPRKLEEPKAS
Specific function: Required for the transposition of the insertion element [H]
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 16833; Mature: 16702
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAQWIDDDCLQELRWMYDRRDLSEMRRDLAQWLAKWETRCPKLCQWAEDNVEETLTFNR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LPRQHHNSLKSANSLERLNQEIKRRTHVVRIFPSAENCLRLVRALAVETHENCWRRFAIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC TGSTWPSKEMPRKLEEPKAS CCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure PAQWIDDDCLQELRWMYDRRDLSEMRRDLAQWLAKWETRCPKLCQWAEDNVEETLTFNR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH LPRQHHNSLKSANSLERLNQEIKRRTHVVRIFPSAENCLRLVRALAVETHENCWRRFAIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC TGSTWPSKEMPRKLEEPKAS CCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7768811; 11481430 [H]