| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475128
Identifier: 13475128
GI number: 13475128
Start: 4968590
End: 4969780
Strand: Direct
Name: 13475128
Synonym: mlr6140
Alternate gene names: NA
Gene position: 4968590-4969780 (Clockwise)
Preceding gene: 13475127
Following gene: 13475129
Centisome position: 70.62
GC content: 60.12
Gene sequence:
>1191_bases ATGTCCGCCGATCTGATAAGTCGTGATCCGCATCTGAAGCGGCTGCTGGACGAGGGGTTCGAGCTCGAGATGCGCGAGCT CGTTCTTCTCCTCGTTCACAGCGTCCCCTACGTGAAGCGCGACAAGTCGCTTGGCCGCGGCACGCTTGTCTGCACTCTGT CGCTGGATACCCAAGGCCTGACCGCATCTCCACAGACCGACCACACCATGTGGTTCACCGGAGAGACGCCTTGCCATCGC GATGGTGCGCCGATGACCAATATCATTCACAACAGCAACGAGGCGACTGTCGGGTCCGACATCAAGGTCCACCACTATTT CTCGTCGAAGCCAGAAGGGACCGGCCAGTATGCCAACATTTACGACAAGGTTGTCACCTACGAATCGCACCTCGGCGCCG CCGCGCGGTCGCACGACAAGACCGCGAACGCGCGCACAGGCGTCACGCTAGCCAGCGCGCAGGACGATAGCCCCTTCGCG ATCCCCGATTCTGCGTCAGCCCGCTACGGAATCGTTGCCGCCAATCGCAAGCTCAGAGGCCGCGTCGCGATCATCGGCCT CGGCGGCACCGGTGCCTATCTGCTCGATCTCGCCGCCAAGACCCGCGTTGCCGAGATCCACCTCTACGACGACGACCAAC TTCTCAACCACAATCTTTTCCGTTCGCCTGGTGCTCCCGAACCGGTGCTGGCGAAGAATTTTCCCCGCAAGGTCGATTAT TACGCAGCGCTTTACGCGCGCATGCACAAGGGCGTGAAGCCGCACCCCACCAGGGTCAAGGCTGACAACATTGACGAATT TGCGGGATATGACTTCGTCTTCGTCTGTGTTGACAAGGGATCGTCGCGGCGCGTGATTGCCGAAGGGTTGGTTCGCCTGG GCATTCCATTCGTCGACACTGGCATTGGTCTTGGACTCGAACACAACACGCTCGACGGTTGCGCACGGGCGACTTTCATT GCCCCCGGCACGCCGTGGGCGGAGGTGGCGACCCATCTGTCGTTCGGTGACGACGATGAAGAGGCCGATGTGTACGGAAC CGAGATCCAGACCGCCGAGCTCAATTCGTTGAACGCGATCATGGCGATCATGCGCTGGAAGCGCTGGCTGACCTTCTATC GTGATGAGCGCAACGAAAGAAACGCGACATACATGATCGAGGGCAACAACATCACCAACCGGGGGGCATGA
Upstream 100 bases:
>100_bases AAGTTCAAGTACACGATCACCTACCTGAAAGGTGTCCACGGCGCGGAAGGTGATCTGGTGGAGGGCGAGAACATCGAAGT CAAGAACGGGATGGTCTTCA
Downstream 100 bases:
>100_bases TGGCTCGGGTGGATTGTCTTACAACGGTCTTTGTCGAAGACATTCCCGAACAGCTGGACGACGGGGTTCTTTACGTGTCG CGCCAATGCCACGTTGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSADLISRDPHLKRLLDEGFELEMRELVLLLVHSVPYVKRDKSLGRGTLVCTLSLDTQGLTASPQTDHTMWFTGETPCHR DGAPMTNIIHNSNEATVGSDIKVHHYFSSKPEGTGQYANIYDKVVTYESHLGAAARSHDKTANARTGVTLASAQDDSPFA IPDSASARYGIVAANRKLRGRVAIIGLGGTGAYLLDLAAKTRVAEIHLYDDDQLLNHNLFRSPGAPEPVLAKNFPRKVDY YAALYARMHKGVKPHPTRVKADNIDEFAGYDFVFVCVDKGSSRRVIAEGLVRLGIPFVDTGIGLGLEHNTLDGCARATFI APGTPWAEVATHLSFGDDDEEADVYGTEIQTAELNSLNAIMAIMRWKRWLTFYRDERNERNATYMIEGNNITNRGA
Sequences:
>Translated_396_residues MSADLISRDPHLKRLLDEGFELEMRELVLLLVHSVPYVKRDKSLGRGTLVCTLSLDTQGLTASPQTDHTMWFTGETPCHR DGAPMTNIIHNSNEATVGSDIKVHHYFSSKPEGTGQYANIYDKVVTYESHLGAAARSHDKTANARTGVTLASAQDDSPFA IPDSASARYGIVAANRKLRGRVAIIGLGGTGAYLLDLAAKTRVAEIHLYDDDQLLNHNLFRSPGAPEPVLAKNFPRKVDY YAALYARMHKGVKPHPTRVKADNIDEFAGYDFVFVCVDKGSSRRVIAEGLVRLGIPFVDTGIGLGLEHNTLDGCARATFI APGTPWAEVATHLSFGDDDEEADVYGTEIQTAELNSLNAIMAIMRWKRWLTFYRDERNERNATYMIEGNNITNRGA >Mature_395_residues SADLISRDPHLKRLLDEGFELEMRELVLLLVHSVPYVKRDKSLGRGTLVCTLSLDTQGLTASPQTDHTMWFTGETPCHRD GAPMTNIIHNSNEATVGSDIKVHHYFSSKPEGTGQYANIYDKVVTYESHLGAAARSHDKTANARTGVTLASAQDDSPFAI PDSASARYGIVAANRKLRGRVAIIGLGGTGAYLLDLAAKTRVAEIHLYDDDQLLNHNLFRSPGAPEPVLAKNFPRKVDYY AALYARMHKGVKPHPTRVKADNIDEFAGYDFVFVCVDKGSSRRVIAEGLVRLGIPFVDTGIGLGLEHNTLDGCARATFIA PGTPWAEVATHLSFGDDDEEADVYGTEIQTAELNSLNAIMAIMRWKRWLTFYRDERNERNATYMIEGNNITNRGA
Specific function: Unknown
COG id: COG0476
COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43649; Mature: 43517
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADLISRDPHLKRLLDEGFELEMRELVLLLVHSVPYVKRDKSLGRGTLVCTLSLDTQGL CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCC TASPQTDHTMWFTGETPCHRDGAPMTNIIHNSNEATVGSDIKVHHYFSSKPEGTGQYANI CCCCCCCCEEEECCCCCCCCCCCCHHHEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHH YDKVVTYESHLGAAARSHDKTANARTGVTLASAQDDSPFAIPDSASARYGIVAANRKLRG HHHHHHHHHHHCHHHHCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCEEEEEECCCCCC RVAIIGLGGTGAYLLDLAAKTRVAEIHLYDDDQLLNHNLFRSPGAPEPVLAKNFPRKVDY EEEEEEECCCCHHHHHHHHCCEEEEEEEECCCHHHCCCHHCCCCCCCCHHHCCCCCHHHH YAALYARMHKGVKPHPTRVKADNIDEFAGYDFVFVCVDKGSSRRVIAEGLVRLGIPFVDT HHHHHHHHHCCCCCCCCEEECCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEC GIGLGLEHNTLDGCARATFIAPGTPWAEVATHLSFGDDDEEADVYGTEIQTAELNSLNAI CCCCCCCCCCCCCHHHEEEECCCCCHHHHHHHCCCCCCCCCCCEECCEEEEEHHHHHHHH MAIMRWKRWLTFYRDERNERNATYMIEGNNITNRGA HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure SADLISRDPHLKRLLDEGFELEMRELVLLLVHSVPYVKRDKSLGRGTLVCTLSLDTQGL CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCC TASPQTDHTMWFTGETPCHRDGAPMTNIIHNSNEATVGSDIKVHHYFSSKPEGTGQYANI CCCCCCCCEEEECCCCCCCCCCCCHHHEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHH YDKVVTYESHLGAAARSHDKTANARTGVTLASAQDDSPFAIPDSASARYGIVAANRKLRG HHHHHHHHHHHCHHHHCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCEEEEEECCCCCC RVAIIGLGGTGAYLLDLAAKTRVAEIHLYDDDQLLNHNLFRSPGAPEPVLAKNFPRKVDY EEEEEEECCCCHHHHHHHHCCEEEEEEEECCCHHHCCCHHCCCCCCCCHHHCCCCCHHHH YAALYARMHKGVKPHPTRVKADNIDEFAGYDFVFVCVDKGSSRRVIAEGLVRLGIPFVDT HHHHHHHHHCCCCCCCCEEECCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEC GIGLGLEHNTLDGCARATFIAPGTPWAEVATHLSFGDDDEEADVYGTEIQTAELNSLNAI CCCCCCCCCCCCCHHHEEEECCCCCHHHHHHHCCCCCCCCCCCEECCEEEEEHHHHHHHH MAIMRWKRWLTFYRDERNERNATYMIEGNNITNRGA HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA