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The map label for this gene is 13475101

Identifier: 13475101

GI number: 13475101

Start: 4943838

End: 4944047

Strand: Direct

Name: 13475101

Synonym: msr6106

Alternate gene names: NA

Gene position: 4943838-4944047 (Clockwise)

Preceding gene: 13475099

Following gene: 13475102

Centisome position: 70.26

GC content: 55.71

Gene sequence:

>210_bases
ATGGACCTCAAAGAGGTCATGGCGATCAACATGCGTCGTTTGCGCCATGATCAGGATCTGACGCAGGAAGAATTGGCTGC
CCGCGCAGAGCTGAGCATGCGCTATGTGGGCTCGATCGAGCGTGCTCGTGTTTCCGCAAGCGTCAGTGTGCTTGGCCAGC
TCGCAAAAGCGCTTGACGTTGATCCTTGTGAGTTGATTAGGCCGCAGTAA

Upstream 100 bases:

>100_bases
CGTCATCGGATGGGGCAAGACATCTCCTCGTTGGGCTAATCATATTGAATAGGAACGATCGTTCCTAGAACGATAGTTCC
GGTTCTGGTCCCTTCTTGCC

Downstream 100 bases:

>100_bases
CAAAGGCGATCCGGCCCATCCCGGATTGCCCCAATCGCTTTTGATGGCGCGCAGCCGGCCGCCGGTGAACTGAGCCCGCT
TTCTTCGACTTGGATCTAGA

Product: transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>69_residues
MDLKEVMAINMRRLRHDQDLTQEELAARAELSMRYVGSIERARVSASVSVLGQLAKALDVDPCELIRPQ

Sequences:

>Translated_69_residues
MDLKEVMAINMRRLRHDQDLTQEELAARAELSMRYVGSIERARVSASVSVLGQLAKALDVDPCELIRPQ
>Mature_69_residues
MDLKEVMAINMRRLRHDQDLTQEELAARAELSMRYVGSIERARVSASVSVLGQLAKALDVDPCELIRPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7795; Mature: 7795

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKEVMAINMRRLRHDQDLTQEELAARAELSMRYVGSIERARVSASVSVLGQLAKALDV
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DPCELIRPQ
CHHHCCCCC
>Mature Secondary Structure
MDLKEVMAINMRRLRHDQDLTQEELAARAELSMRYVGSIERARVSASVSVLGQLAKALDV
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DPCELIRPQ
CHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA