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The map label for this gene is 13475047

Identifier: 13475047

GI number: 13475047

Start: 4886309

End: 4887094

Strand: Reverse

Name: 13475047

Synonym: mll6047

Alternate gene names: NA

Gene position: 4887094-4886309 (Counterclockwise)

Preceding gene: 13475050

Following gene: 13475046

Centisome position: 69.46

GC content: 65.78

Gene sequence:

>786_bases
TTGACGGCTTTATCCAAGGCAAAGGTCGAGGTCGCCGTGCAAATTGCCCAGCGCTGGGTCCTGGCGCGTCTGCGCAATCA
GCGCTTCTTGTCCCTGGCGGAGCTGAACGCCGCCATCCGCCTGCTGTCGCCGAACTCAACGCCCGCCAGATGCGTGGCTT
CGGCTCCAGCCGCGCTCTTCGCCGAGATCGACAGGCCGAAGCTGGGAGAACTGCCGAACCAGCCATACCTCTTTGCGCGC
TGGAAGCGTTGCCGCGTCGCGCCCGACTATCACGTCGAGGTCGACGGGCACTGGTATTCCACGCCCTACCGTCTCATCCG
GGAACTCGTCGATGTGCGCATCGCCGACAACACCGTCGAGGTCTTCCACAAGGGGCAGCGGATCGCCAGCCACGCCCGTG
CGCCCAACCGGCGCGGCCATACGACCGTTGCCGATCACATGCCGAGCGCGCATCGCCGCTACGGCAAGTGGACGCCGGGG
GGACTGATCGCGGCCGGCGAGAAGATCGGTCCTTCCACCGCTGCCTTCTTCCAGGCTGTCATCGCTGACCGGCCGCACCC
CGAGCAGGGCTTTCGCACCTGCCTCGGCATTTTGGCGCTGAGCAAGAGCTACGGCAACGCGCGCGTCGATGCAGCCTGCC
AGCGCGGCATCCTCATCAAGGCACGCTCCGTCGCCTCGATCCGTTCGATCCTCAAGAACGGCCTTGATCGCGCTTTCCTC
GACGAGGCGCCCGACCACCAACCCCTGCGCCACGGCAATATCCGCGGTCAGGGCTATTTCCACTGA

Upstream 100 bases:

>100_bases
TGCGGGCTGCGGCTGATCATGTCGAAGGTCTGGCCTTTAAGCGGGTGGAATGGGTGAGTAATGCGGACCGTGAGGCCGGT
CGTCCCCACACGGGCTGCAG

Downstream 100 bases:

>100_bases
ACCAGGGAGATATCAATGCTCACCCATCCCACCCATGAACGGCTGGTCGCACTCGGTTTGACCGGAATGGCCAAGGCCTT
CGAGGAGCAGCGACGATCAC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MTALSKAKVEVAVQIAQRWVLARLRNQRFLSLAELNAAIRLLSPNSTPARCVASAPAALFAEIDRPKLGELPNQPYLFAR
WKRCRVAPDYHVEVDGHWYSTPYRLIRELVDVRIADNTVEVFHKGQRIASHARAPNRRGHTTVADHMPSAHRRYGKWTPG
GLIAAGEKIGPSTAAFFQAVIADRPHPEQGFRTCLGILALSKSYGNARVDAACQRGILIKARSVASIRSILKNGLDRAFL
DEAPDHQPLRHGNIRGQGYFH

Sequences:

>Translated_261_residues
MTALSKAKVEVAVQIAQRWVLARLRNQRFLSLAELNAAIRLLSPNSTPARCVASAPAALFAEIDRPKLGELPNQPYLFAR
WKRCRVAPDYHVEVDGHWYSTPYRLIRELVDVRIADNTVEVFHKGQRIASHARAPNRRGHTTVADHMPSAHRRYGKWTPG
GLIAAGEKIGPSTAAFFQAVIADRPHPEQGFRTCLGILALSKSYGNARVDAACQRGILIKARSVASIRSILKNGLDRAFL
DEAPDHQPLRHGNIRGQGYFH
>Mature_260_residues
TALSKAKVEVAVQIAQRWVLARLRNQRFLSLAELNAAIRLLSPNSTPARCVASAPAALFAEIDRPKLGELPNQPYLFARW
KRCRVAPDYHVEVDGHWYSTPYRLIRELVDVRIADNTVEVFHKGQRIASHARAPNRRGHTTVADHMPSAHRRYGKWTPGG
LIAAGEKIGPSTAAFFQAVIADRPHPEQGFRTCLGILALSKSYGNARVDAACQRGILIKARSVASIRSILKNGLDRAFLD
EAPDHQPLRHGNIRGQGYFH

Specific function: Unknown

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR017895
- InterPro:   IPR001584
- InterPro:   IPR013249
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 29032; Mature: 28900

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALSKAKVEVAVQIAQRWVLARLRNQRFLSLAELNAAIRLLSPNSTPARCVASAPAALF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCCHHHH
AEIDRPKLGELPNQPYLFARWKRCRVAPDYHVEVDGHWYSTPYRLIRELVDVRIADNTVE
HHCCCCCCCCCCCCCEEEEHHHHCCCCCCCEEEECCEEECCHHHHHHHHHHCCCCCCHHH
VFHKGQRIASHARAPNRRGHTTVADHMPSAHRRYGKWTPGGLIAAGEKIGPSTAAFFQAV
HHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHH
IADRPHPEQGFRTCLGILALSKSYGNARVDAACQRGILIKARSVASIRSILKNGLDRAFL
HHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEHHHHHHHHHHHHHCCCHHHH
DEAPDHQPLRHGNIRGQGYFH
HCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TALSKAKVEVAVQIAQRWVLARLRNQRFLSLAELNAAIRLLSPNSTPARCVASAPAALF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCCHHHH
AEIDRPKLGELPNQPYLFARWKRCRVAPDYHVEVDGHWYSTPYRLIRELVDVRIADNTVE
HHCCCCCCCCCCCCCEEEEHHHHCCCCCCCEEEECCEEECCHHHHHHHHHHCCCCCCHHH
VFHKGQRIASHARAPNRRGHTTVADHMPSAHRRYGKWTPGGLIAAGEKIGPSTAAFFQAV
HHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHH
IADRPHPEQGFRTCLGILALSKSYGNARVDAACQRGILIKARSVASIRSILKNGLDRAFL
HHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEHHHHHHHHHHHHHCCCHHHH
DEAPDHQPLRHGNIRGQGYFH
HCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]