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The map label for this gene is 13474978

Identifier: 13474978

GI number: 13474978

Start: 4901880

End: 4902992

Strand: Direct

Name: 13474978

Synonym: mlr6063

Alternate gene names: NA

Gene position: 4901880-4902992 (Clockwise)

Preceding gene: 13475060

Following gene: 13474996

Centisome position: 69.67

GC content: 63.07

Gene sequence:

>1113_bases
GTGGACGGCCCCCGCACGGCATCGATGTGCCAGAATGAGGTCGTTGCAGATCTCAAGCAAAGGAGACCGTCCGTGGAACA
AATTATTCGAATTGGCATCGACACGTCAAAGCACGTCTTCCAACTCCATGGTGTGAACGCGGCTGAGGAGCCGGTGCTGC
GCAAGAAGCTGAGGCGCAAGGAGGTGGTAGCGTTGTTCGAGAAGCTGTCGCCGACGGTGGTAGCGATCGAAGCGTGCGGG
GGCTCGCACCACTGGGCGCGCCTGCTGCAGTCGTTCGGGCACGAGGTGAAGCTGATCCCTCCGCAATATGTCAAACCGTA
CGTCAAGCGCGGCAAGAACGATACGGCCGATGCCGAAGCGCTGTGCGAGGCGATGAGCCGGCCGACGATGCGGTTTGTGC
CGGTCAAGACCGCTAAACAACAGGCGGCATTGATGCTGGTTGGCCTGCGCGACCGGCTGATCCGCAATCGCACGCAGCTC
GCCAATGCGATCCGCGGCTATGCGGCAGAATACGGGCTGATCGCTGCCAGGGGGATGTGCAAGATCGAACCGCTGCTCGA
GCGTATCGCGGCAGATAAGATGCTACCGGATTTGGCGCGGGAGCTGTTCGCGCTCCATGCCAAGGAATATGCGCAGCTGC
AAACACAACTGAAAGACGTCGACGCCAAATTGATGGCTTGGCATCGGGCCGAGGCGTGCAGCCAGCGCCTGGCGCAAATC
CCCGGTGTCGGCCCGATCGGTGCGTCGCTACTGGTGATGAAGACGCCGGCACCTGAGACCTTTCGATCGGCCCGACACTT
TGCCGCCTGGCTTGGCCTAACGCCGAAGGATCATTCAACTGCCGGCAGGGTCAGGCTCGGTGTGATCACGCGCGCCGGCG
ACGAAGCCTTGCGCAGCGTGCTGGTGGCCGGGGCTACTGCTGTCATCCGGCATGTCCGACGCGGCCGAGGCGCCGTCTCC
CCCTGGCTCGTCGACCTACTCAAGCGCAAGCCGCCGAAACTCGCTGCCGTGGCGCTAGCGAACAAGATCGCGCGCATCGC
CTGGAAGCTAATGGTAAGCGGCGAGATCTACGGAGCGAAGCCTATGCCGCCAGCCTCGGCGCGCGCCGCATAG

Upstream 100 bases:

>100_bases
TGGGGTCAAGCTCCTCCTGATATTTTTTTCCGGACCATGTCGCCCCGCGGGTCACTCGCTTCTCTTCGCGGTCGACGTTA
GGCCGCCGCATGATGTTGGG

Downstream 100 bases:

>100_bases
AGATCGGCCAGACACGGGGAACATCTCTACTGTTACCGTGCTGAGCTGGTGCCGGAACTTGCAAGAGAATGAGCAGTTGG
TGTGATCGATCGATCCGAGA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MDGPRTASMCQNEVVADLKQRRPSVEQIIRIGIDTSKHVFQLHGVNAAEEPVLRKKLRRKEVVALFEKLSPTVVAIEACG
GSHHWARLLQSFGHEVKLIPPQYVKPYVKRGKNDTADAEALCEAMSRPTMRFVPVKTAKQQAALMLVGLRDRLIRNRTQL
ANAIRGYAAEYGLIAARGMCKIEPLLERIAADKMLPDLARELFALHAKEYAQLQTQLKDVDAKLMAWHRAEACSQRLAQI
PGVGPIGASLLVMKTPAPETFRSARHFAAWLGLTPKDHSTAGRVRLGVITRAGDEALRSVLVAGATAVIRHVRRGRGAVS
PWLVDLLKRKPPKLAAVALANKIARIAWKLMVSGEIYGAKPMPPASARAA

Sequences:

>Translated_370_residues
MDGPRTASMCQNEVVADLKQRRPSVEQIIRIGIDTSKHVFQLHGVNAAEEPVLRKKLRRKEVVALFEKLSPTVVAIEACG
GSHHWARLLQSFGHEVKLIPPQYVKPYVKRGKNDTADAEALCEAMSRPTMRFVPVKTAKQQAALMLVGLRDRLIRNRTQL
ANAIRGYAAEYGLIAARGMCKIEPLLERIAADKMLPDLARELFALHAKEYAQLQTQLKDVDAKLMAWHRAEACSQRLAQI
PGVGPIGASLLVMKTPAPETFRSARHFAAWLGLTPKDHSTAGRVRLGVITRAGDEALRSVLVAGATAVIRHVRRGRGAVS
PWLVDLLKRKPPKLAAVALANKIARIAWKLMVSGEIYGAKPMPPASARAA
>Mature_370_residues
MDGPRTASMCQNEVVADLKQRRPSVEQIIRIGIDTSKHVFQLHGVNAAEEPVLRKKLRRKEVVALFEKLSPTVVAIEACG
GSHHWARLLQSFGHEVKLIPPQYVKPYVKRGKNDTADAEALCEAMSRPTMRFVPVKTAKQQAALMLVGLRDRLIRNRTQL
ANAIRGYAAEYGLIAARGMCKIEPLLERIAADKMLPDLARELFALHAKEYAQLQTQLKDVDAKLMAWHRAEACSQRLAQI
PGVGPIGASLLVMKTPAPETFRSARHFAAWLGLTPKDHSTAGRVRLGVITRAGDEALRSVLVAGATAVIRHVRRGRGAVS
PWLVDLLKRKPPKLAAVALANKIARIAWKLMVSGEIYGAKPMPPASARAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 40636; Mature: 40636

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGPRTASMCQNEVVADLKQRRPSVEQIIRIGIDTSKHVFQLHGVNAAEEPVLRKKLRRK
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHEEEEECCCCCCHHHHHHHHHHH
EVVALFEKLSPTVVAIEACGGSHHWARLLQSFGHEVKLIPPQYVKPYVKRGKNDTADAEA
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCCCHHHH
LCEAMSRPTMRFVPVKTAKQQAALMLVGLRDRLIRNRTQLANAIRGYAAEYGLIAARGMC
HHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KIEPLLERIAADKMLPDLARELFALHAKEYAQLQTQLKDVDAKLMAWHRAEACSQRLAQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGVGPIGASLLVMKTPAPETFRSARHFAAWLGLTPKDHSTAGRVRLGVITRAGDEALRSV
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHH
LVAGATAVIRHVRRGRGAVSPWLVDLLKRKPPKLAAVALANKIARIAWKLMVSGEIYGAK
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCC
PMPPASARAA
CCCCCCCCCC
>Mature Secondary Structure
MDGPRTASMCQNEVVADLKQRRPSVEQIIRIGIDTSKHVFQLHGVNAAEEPVLRKKLRRK
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHEEEEECCCCCCHHHHHHHHHHH
EVVALFEKLSPTVVAIEACGGSHHWARLLQSFGHEVKLIPPQYVKPYVKRGKNDTADAEA
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCCCHHHH
LCEAMSRPTMRFVPVKTAKQQAALMLVGLRDRLIRNRTQLANAIRGYAAEYGLIAARGMC
HHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KIEPLLERIAADKMLPDLARELFALHAKEYAQLQTQLKDVDAKLMAWHRAEACSQRLAQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGVGPIGASLLVMKTPAPETFRSARHFAAWLGLTPKDHSTAGRVRLGVITRAGDEALRSV
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHH
LVAGATAVIRHVRRGRGAVSPWLVDLLKRKPPKLAAVALANKIARIAWKLMVSGEIYGAK
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCC
PMPPASARAA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]