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The map label for this gene is sdiA [C]

Identifier: 13474964

GI number: 13474964

Start: 4812607

End: 4813353

Strand: Reverse

Name: sdiA [C]

Synonym: mll8752

Alternate gene names: 13474964

Gene position: 4813353-4812607 (Counterclockwise)

Preceding gene: 13474966

Following gene: 13474959

Centisome position: 68.41

GC content: 48.59

Gene sequence:

>747_bases
ATGGGACTCCCTCGGATTGGGGTCGAGTTAGGCCGGTTCCTCGACCAGACTGATGGTATCGCTCAATCCGAACAGTTGTT
CGACCTGTTGTCTGCTTTTGCGCTGAATTTTGATTGCCCCTGGATCGCGTACGGTCCTCTTGCACCCGCGCAAAAGGTTT
TGAAGCCAGCCCAAGCGGATTCGGCGATCATGTTGAATTACCCTAATGAATGGAAGGAACGCTACTTCAAAATGGGTTAT
GACAAAATAGACCCGATCATCAAGAAAAGTCGAAAGGGGGTAGGCGCCATTCGATGGAGCGAGGTGTATAAGGATGCAAG
CACGACTGACAATGAACGGCGCGTTTTAGACGAAGCAGCGACGTTTGGCTTAAAGTCAGGCGTTACTGTTCCATTGCACG
GCCCCGCTGGCAGCTTTACCATCATGAGCTTTGCGCAACCTTGGGACCGCGAATTCCAAAATAGAACAGTCACTTACTTG
CAACTGGCTGCGTTACATTTTCATGTGAGGGTTACGAAAGGCACCAGTTCGAACGCATTGAAGCAAGTTCAGGACCTATC
TCTTAGAGAGAAAGAGTGCATTCTGTGGATAGCGAGAGGTAAATCTTCATGGGAAATAGGGAAGATTCTAGGGATATCCG
GAAACACCGTAAATTTCCATTTAAAAAACGCGATGCGGAAGTTGGATACGGCCAGCAGAACCGTCGCTGCTATTAAAGCA
ACAAGTCTCGGAATTGTCGAAGTATGA

Upstream 100 bases:

>100_bases
GCATTTTGCGATGCTGGCCTGCCGGCGGCGGCCTATAGAGCCACAGGCTCTTACAGCCGTCTGCTTTGTGCACCGGTGAC
AACGCAGGGAAGGGGACACG

Downstream 100 bases:

>100_bases
ATATTGCCCTAGAAGGCGTGAGCACGAGTTCTTGAAATTCCTCAAACAGAAATTGTGACCTGCCACTGAACATTCATCCA
GCGGCGATTAGAGCCTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MGLPRIGVELGRFLDQTDGIAQSEQLFDLLSAFALNFDCPWIAYGPLAPAQKVLKPAQADSAIMLNYPNEWKERYFKMGY
DKIDPIIKKSRKGVGAIRWSEVYKDASTTDNERRVLDEAATFGLKSGVTVPLHGPAGSFTIMSFAQPWDREFQNRTVTYL
QLAALHFHVRVTKGTSSNALKQVQDLSLREKECILWIARGKSSWEIGKILGISGNTVNFHLKNAMRKLDTASRTVAAIKA
TSLGIVEV

Sequences:

>Translated_248_residues
MGLPRIGVELGRFLDQTDGIAQSEQLFDLLSAFALNFDCPWIAYGPLAPAQKVLKPAQADSAIMLNYPNEWKERYFKMGY
DKIDPIIKKSRKGVGAIRWSEVYKDASTTDNERRVLDEAATFGLKSGVTVPLHGPAGSFTIMSFAQPWDREFQNRTVTYL
QLAALHFHVRVTKGTSSNALKQVQDLSLREKECILWIARGKSSWEIGKILGISGNTVNFHLKNAMRKLDTASRTVAAIKA
TSLGIVEV
>Mature_247_residues
GLPRIGVELGRFLDQTDGIAQSEQLFDLLSAFALNFDCPWIAYGPLAPAQKVLKPAQADSAIMLNYPNEWKERYFKMGYD
KIDPIIKKSRKGVGAIRWSEVYKDASTTDNERRVLDEAATFGLKSGVTVPLHGPAGSFTIMSFAQPWDREFQNRTVTYLQ
LAALHFHVRVTKGTSSNALKQVQDLSLREKECILWIARGKSSWEIGKILGISGNTVNFHLKNAMRKLDTASRTVAAIKAT
SLGIVEV

Specific function: Activates Cell Division By Specifically Increasing Transcription From One Of The Two Promoters That Lie Immediately Upstream Of The Ftsqaz Gene Cluster. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788224, Length=189, Percent_Identity=29.1005291005291, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 27605; Mature: 27474

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLPRIGVELGRFLDQTDGIAQSEQLFDLLSAFALNFDCPWIAYGPLAPAQKVLKPAQAD
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCCC
SAIMLNYPNEWKERYFKMGYDKIDPIIKKSRKGVGAIRWSEVYKDASTTDNERRVLDEAA
CEEEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCHHHHHHHHHH
TFGLKSGVTVPLHGPAGSFTIMSFAQPWDREFQNRTVTYLQLAALHFHVRVTKGTSSNAL
HHHHCCCCEEEEECCCCCEEEEECCCCHHHHHHCCHHHHHEEEEEEEEEEEECCCCHHHH
KQVQDLSLREKECILWIARGKSSWEIGKILGISGNTVNFHLKNAMRKLDTASRTVAAIKA
HHHHHCCCCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHEE
TSLGIVEV
CCCCEEEC
>Mature Secondary Structure 
GLPRIGVELGRFLDQTDGIAQSEQLFDLLSAFALNFDCPWIAYGPLAPAQKVLKPAQAD
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCCC
SAIMLNYPNEWKERYFKMGYDKIDPIIKKSRKGVGAIRWSEVYKDASTTDNERRVLDEAA
CEEEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCHHHHHHHHHH
TFGLKSGVTVPLHGPAGSFTIMSFAQPWDREFQNRTVTYLQLAALHFHVRVTKGTSSNAL
HHHHCCCCEEEEECCCCCEEEEECCCCHHHHHHCCHHHHHEEEEEEEEEEEECCCCHHHH
KQVQDLSLREKECILWIARGKSSWEIGKILGISGNTVNFHLKNAMRKLDTASRTVAAIKA
HHHHHCCCCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHEE
TSLGIVEV
CCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]