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The map label for this gene is yadR [C]

Identifier: 13474947

GI number: 13474947

Start: 4805874

End: 4806194

Strand: Reverse

Name: yadR [C]

Synonym: mll5942

Alternate gene names: 13474947

Gene position: 4806194-4805874 (Counterclockwise)

Preceding gene: 13474954

Following gene: 13474946

Centisome position: 68.31

GC content: 62.93

Gene sequence:

>321_bases
ATGATCACACTCACTGAAAACGCCGTCGCCGCCGTCAAGGCCGCGCTTTCCCGCGCCGACGAGCCGGCGGAAGGCTTTCG
CATCATGGTCGAGGCGGGCGGCTGCGCCGGCCTCAAATACCTGATGGGTCTGGAAAGCGTCTCGCGCGAGGGCGATGCCA
TCATGGAGACGGACGGGTTCAAGGTGTTCGTCGACGCAAACTCCCAGCCCCATCTCGCCGGCATGACCGTTGACTTCGTC
ACGGACCTGGAGTCCTCGGGCTTTGTCTTCGACAATCCCAATGCGCGGGACAAATGTGCCTGCGGCAAGTCCTTCGGCTA
G

Upstream 100 bases:

>100_bases
AGGGAGTCAAATCCGCTAACCCGGTGTTTTAATCCAATCTTCCTCTCTGGCACGTCCTGTGCAGCGCGACTTGCGAATGC
ATCAGCAAGAAAATAGTCCC

Downstream 100 bases:

>100_bases
CCGCCATCACGACAAGGATCGGCACCGTGCGGGATAATACCGACAACGTCTACCTCTTCAGCGACAAGCTCTATTTCATC
AATCCGCACAATGTCGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MITLTENAVAAVKAALSRADEPAEGFRIMVEAGGCAGLKYLMGLESVSREGDAIMETDGFKVFVDANSQPHLAGMTVDFV
TDLESSGFVFDNPNARDKCACGKSFG

Sequences:

>Translated_106_residues
MITLTENAVAAVKAALSRADEPAEGFRIMVEAGGCAGLKYLMGLESVSREGDAIMETDGFKVFVDANSQPHLAGMTVDFV
TDLESSGFVFDNPNARDKCACGKSFG
>Mature_106_residues
MITLTENAVAAVKAALSRADEPAEGFRIMVEAGGCAGLKYLMGLESVSREGDAIMETDGFKVFVDANSQPHLAGMTVDFV
TDLESSGFVFDNPNARDKCACGKSFG

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=105, Percent_Identity=38.0952380952381, Blast_Score=75, Evalue=1e-14,
Organism=Homo sapiens, GI160420328, Length=106, Percent_Identity=37.7358490566038, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1786351, Length=104, Percent_Identity=35.5769230769231, Blast_Score=78, Evalue=1e-16,
Organism=Escherichia coli, GI1788877, Length=104, Percent_Identity=37.5, Blast_Score=72, Evalue=1e-14,
Organism=Escherichia coli, GI1787974, Length=106, Percent_Identity=35.8490566037736, Blast_Score=69, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI25146411, Length=104, Percent_Identity=38.4615384615385, Blast_Score=79, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193209025, Length=104, Percent_Identity=38.4615384615385, Blast_Score=79, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=37.037037037037, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323001, Length=107, Percent_Identity=34.5794392523364, Blast_Score=69, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24642263, Length=105, Percent_Identity=40.9523809523809, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 11171; Mature: 11171

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLTENAVAAVKAALSRADEPAEGFRIMVEAGGCAGLKYLMGLESVSREGDAIMETDGF
CEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCE
KVFVDANSQPHLAGMTVDFVTDLESSGFVFDNPNARDKCACGKSFG
EEEEECCCCCCEECEEEEHEECCCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MITLTENAVAAVKAALSRADEPAEGFRIMVEAGGCAGLKYLMGLESVSREGDAIMETDGF
CEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCE
KVFVDANSQPHLAGMTVDFVTDLESSGFVFDNPNARDKCACGKSFG
EEEEECCCCCCEECEEEEHEECCCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]