Click here to switch to the map view.

The map label for this gene is yrkJ [H]

Identifier: 13474679

GI number: 13474679

Start: 4510769

End: 4511692

Strand: Reverse

Name: yrkJ [H]

Synonym: mll5620

Alternate gene names: 13474679

Gene position: 4511692-4510769 (Counterclockwise)

Preceding gene: 13474680

Following gene: 13474678

Centisome position: 64.12

GC content: 63.85

Gene sequence:

>924_bases
GTGGGCATCTATCTCCCGATTGCGGAAATTTCCGTCAACGTCTTCGTGCTGCTGGCCATGGGCGCTGCAGTGGGCTTCCT
GTCGGGCATGTTCGGCGTCGGCGGCGGCTTCCTGATCACGCCGCTCCTGATCTTCTACAACATCCCTCCGGCGATCGCGG
TCGCCACCGGCGCCAACCAGGTCATCGCCTCTTCCGTCTCCGGCGTGCTTTCGCACATGAAGCGGGGGACGCTCGACTTC
AAGCTCGGCGGCGTGCTTCTGGCCGGCGGCATCATTGGCTCCACCGCCGGTATCTACGTGTTCGCCTTCCTGCGCCGGCT
TGGCCAGCTCGACCTGTTCATCTCGCTGCTTTATGTCGTGCTGCTCGGCACGGTCGGCGGGCTGATGCTGGTCGAAAGCA
TCAATGCACTGCGGGCCACACGCAGTGGTGCTGCCCCCGTGCTGAAGAAATCCGGCCAGCACAACTGGATCCACCGGCTG
CCGCTGAAGATGCGCTTCAGGGCGTCGAAACTGTTCGTCAGCGTCATTCCGGTGCTTGGCCTTGGCGCCGGCATCGGTTT
CCTGTCGTCGATCATGGGCGTCGGCGGCGGCTTCATCATGGTGCCGGCGCTGATCTATCTGCTCAAAGTGCCGACCAACG
TCGTCATCGGCACTTCGCTGTTCCAGATCATCTTCACCTCCGCCTACACCACGCTGGTCCACGCCACCACCAACCAGACC
GTCGATGTCGTGCTGGCCTTCCTTTTGATGGCGGGCGGCGTTGCTGGCGCGCAATATGGCGCGAAGGCCGGCCAAAGGCT
GCGCGGCGAGCAGCTCAGGGCGTTGCTGGCGCTGCTGGTGCTGGCGGTGGCGATCCGGCTCGCCATCGATCTCTTCGTCA
CTCCGCCCAATCTCTTTTCGCTGTCCGCCGCGGGCCTCAACTGA

Upstream 100 bases:

>100_bases
ACCCCGCCGCCGCGTTGGCGCAAGGAAAAATTGGCTTTTCGGTGCGAGACTGCCCAGAACGGCTGTATTCGCCGACAGGC
AAACTGATCGAGACTGACGG

Downstream 100 bases:

>100_bases
TGACGGGCCCGAAAGCGTTCGCAGCCGCCATTCTCCTGTCGTTGCTGGCGGCCGCCGTGCCGGCGAAGGCACAGACACCA
TTGGTGGAAGGCATCCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MGIYLPIAEISVNVFVLLAMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPAIAVATGANQVIASSVSGVLSHMKRGTLDF
KLGGVLLAGGIIGSTAGIYVFAFLRRLGQLDLFISLLYVVLLGTVGGLMLVESINALRATRSGAAPVLKKSGQHNWIHRL
PLKMRFRASKLFVSVIPVLGLGAGIGFLSSIMGVGGGFIMVPALIYLLKVPTNVVIGTSLFQIIFTSAYTTLVHATTNQT
VDVVLAFLLMAGGVAGAQYGAKAGQRLRGEQLRALLALLVLAVAIRLAIDLFVTPPNLFSLSAAGLN

Sequences:

>Translated_307_residues
MGIYLPIAEISVNVFVLLAMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPAIAVATGANQVIASSVSGVLSHMKRGTLDF
KLGGVLLAGGIIGSTAGIYVFAFLRRLGQLDLFISLLYVVLLGTVGGLMLVESINALRATRSGAAPVLKKSGQHNWIHRL
PLKMRFRASKLFVSVIPVLGLGAGIGFLSSIMGVGGGFIMVPALIYLLKVPTNVVIGTSLFQIIFTSAYTTLVHATTNQT
VDVVLAFLLMAGGVAGAQYGAKAGQRLRGEQLRALLALLVLAVAIRLAIDLFVTPPNLFSLSAAGLN
>Mature_306_residues
GIYLPIAEISVNVFVLLAMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPAIAVATGANQVIASSVSGVLSHMKRGTLDFK
LGGVLLAGGIIGSTAGIYVFAFLRRLGQLDLFISLLYVVLLGTVGGLMLVESINALRATRSGAAPVLKKSGQHNWIHRLP
LKMRFRASKLFVSVIPVLGLGAGIGFLSSIMGVGGGFIMVPALIYLLKVPTNVVIGTSLFQIIFTSAYTTLVHATTNQTV
DVVLAFLLMAGGVAGAQYGAKAGQRLRGEQLRALLALLVLAVAIRLAIDLFVTPPNLFSLSAAGLN

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 31952; Mature: 31821

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIYLPIAEISVNVFVLLAMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPAIAVATGANQ
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHEEECCCHH
VIASSVSGVLSHMKRGTLDFKLGGVLLAGGIIGSTAGIYVFAFLRRLGQLDLFISLLYVV
HHHHHHHHHHHHHHCCCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGTVGGLMLVESINALRATRSGAAPVLKKSGQHNWIHRLPLKMRFRASKLFVSVIPVLG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH
LGAGIGFLSSIMGVGGGFIMVPALIYLLKVPTNVVIGTSLFQIIFTSAYTTLVHATTNQT
HCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VDVVLAFLLMAGGVAGAQYGAKAGQRLRGEQLRALLALLVLAVAIRLAIDLFVTPPNLFS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LSAAGLN
CCCCCCC
>Mature Secondary Structure 
GIYLPIAEISVNVFVLLAMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPAIAVATGANQ
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHEEECCCHH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CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]