| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is fur [C]
Identifier: 13474640
GI number: 13474640
Start: 4470848
End: 4471279
Strand: Direct
Name: fur [C]
Synonym: mlr5570
Alternate gene names: 13474640
Gene position: 4470848-4471279 (Clockwise)
Preceding gene: 13474635
Following gene: 13474641
Centisome position: 63.54
GC content: 64.58
Gene sequence:
>432_bases ATGGACCGGGGCTGCCGGAAGGAAAATGTCGCTGTGGACAAGCGGGTACGTGAAGCCGGCCTGAGGCCGACGCGGCAGCG CATTGCGCTGGCCGACCTGCTTTTCGCCAAGGGCGATCGCCATCTCTCGGCCGAGGAACTGCACGAGGAGGCGCTGGCCG CCGGCGTGCCGGTGTCGCTGGCCACGGTCTACAACGCGCTCCACCAGTTCACCCAGGCGGGGCTGCTGCGCATCCTCGCC GTCGAGGGCGCCAAGACCTATTTCGACACCAACACCTCCGACCACCATCATTTCTACATCGAAGGCGAAAACCGGATTTT CGACATCGCCAACGGCCCGGTGACAGTCACCAACCTGCCGGATCCGCCCGAGGGCATGGAAATCGCCAATGTCGACATCG TGGTGAGGCTGCGCCCCAAGCGCCAGGAATGA
Upstream 100 bases:
>100_bases CGACAGAATATATGTCAACAGGGGTCCGGTTTCGGCAGACATTCATTTTTTTGCCATTCTGGGCATGTCTTGAAGCGGGA CTGTTGGCTTGGAAGACCAG
Downstream 100 bases:
>100_bases CCGGCGAGGCCAAGACAATCGGTCCGGCCGGGAATGATCTGTCAGGCCAGAGTACTCTGTCAGGGATGAAGCTCCTCGAC CGGATAACCCGGCTCGAATG
Product: transcription regulator
Products: NA
Alternate protein names: Ferric Uptake Regulator Fur Family; Transcriptional Regulator Fur Family; FUR Family Transcriptional Regulator; Ferric-Uptake Regulator; Iron Response Regulator; Fe2+/Zn2+ Uptake Regulation Protein; Ferric Uptake Regulator; Fur Family Transcriptional Regulator; Fur Family Ferric Uptake Regulator; Ferric Uptake Regulator FUR Family; Transcriptional Regulator; Ferric Uptake Transcriptional Regulator; Transcriptional Regulator Fur Family Protein; Iron Response Regulator Irr; Transcription Regulator; Iron Transcriptional Regulator Protein
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MDRGCRKENVAVDKRVREAGLRPTRQRIALADLLFAKGDRHLSAEELHEEALAAGVPVSLATVYNALHQFTQAGLLRILA VEGAKTYFDTNTSDHHHFYIEGENRIFDIANGPVTVTNLPDPPEGMEIANVDIVVRLRPKRQE
Sequences:
>Translated_143_residues MDRGCRKENVAVDKRVREAGLRPTRQRIALADLLFAKGDRHLSAEELHEEALAAGVPVSLATVYNALHQFTQAGLLRILA VEGAKTYFDTNTSDHHHFYIEGENRIFDIANGPVTVTNLPDPPEGMEIANVDIVVRLRPKRQE >Mature_143_residues MDRGCRKENVAVDKRVREAGLRPTRQRIALADLLFAKGDRHLSAEELHEEALAAGVPVSLATVYNALHQFTQAGLLRILA VEGAKTYFDTNTSDHHHFYIEGENRIFDIANGPVTVTNLPDPPEGMEIANVDIVVRLRPKRQE
Specific function: Acts As A Global Negative Controlling Element, Employing Fe(2+) As A Cofactor To Bind The Operator Of The Repressed Genes. Regulates The Expression Of Several Outer-Membrane Proteins Including The Iron Transport Operon. [C]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15966; Mature: 15966
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRGCRKENVAVDKRVREAGLRPTRQRIALADLLFAKGDRHLSAEELHEEALAAGVPVSL CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHH ATVYNALHQFTQAGLLRILAVEGAKTYFDTNTSDHHHFYIEGENRIFDIANGPVTVTNLP HHHHHHHHHHHHHHHHEEEEECCCCEEECCCCCCCEEEEEECCCEEEEECCCCEEECCCC DPPEGMEIANVDIVVRLRPKRQE CCCCCCEEECEEEEEEECCCCCC >Mature Secondary Structure MDRGCRKENVAVDKRVREAGLRPTRQRIALADLLFAKGDRHLSAEELHEEALAAGVPVSL CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHH ATVYNALHQFTQAGLLRILAVEGAKTYFDTNTSDHHHFYIEGENRIFDIANGPVTVTNLP HHHHHHHHHHHHHHHHEEEEECCCCEEECCCCCCCEEEEEECCCEEEEECCCCEEECCCC DPPEGMEIANVDIVVRLRPKRQE CCCCCCEEECEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA