Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13474605

Identifier: 13474605

GI number: 13474605

Start: 4434285

End: 4435604

Strand: Direct

Name: 13474605

Synonym: mlr5523

Alternate gene names: NA

Gene position: 4434285-4435604 (Clockwise)

Preceding gene: 13474603

Following gene: 13474606

Centisome position: 63.02

GC content: 60.83

Gene sequence:

>1320_bases
ATGGAATTTCCGAAAAACTGGAGACCGATAATGACAGCACGATATGGCGGCAGGCTGGCGGCGATTGGTGCCACGGCGCT
GCTGACGGCGGCGGTGTTCGTGCTGCCTGCCAAGGCGGAAACCGACGCGAAAGCGGTCATCAGGACCTATTCCGATATCG
CGCTTGCCAAATATGAGGATTCGTTGACCACGGCGCAGGCTCTCGACAAGGCGGTCGATGCGCTGCTGGCCAAGCCGTCG
GCGGAAACGCTCAATGTCGCCCGCGACGCCTGGAAGGCCGCGCGAGTGCCCTACCAGCAGACCGAGGTCTATCGCTTCGG
CAACAAGATCGTCGATGACTGGGAAGGCGAGGTGAATTCCTGGCCGCTGGACGAAGGCCTGATCGACTATGTCGCCAAGA
GCTACGGCACGGAATCGGACACGAATTCGCTCTATACGGCCAATGTGATCGCCAACAAGGAAATCGAGATCAACGGCAAG
AAGGTCGACGCTTCGAAGCTTTCGCCTGAATTCCTTTCAGGCACGTTGCAGCAAGCCGGCGGCGTCGAGGCCAATGTCGC
CACCGGTTATCACGCCATCGAATTCCTGCTCTGGGGCCAGGATCTGCATGGCACCGGCCCGGGTGCCGGCGAGCGCCCCT
ACACCGATTACGATCTCAGGAACTGCACCGGTGGCAATTGCGACCGCCGTGCCGAATATCTGAAATCCGCCACCACACTT
CTGGTTTCGGACCTGCAGAAGATGGTCAACGACTGGAAGGAAGACGGCGCCGCACGCAAGAACCTCGTCGATGGCGAGCC
GAACACGGCGATCTCGGTCATCTTCACCGGCATGGGCTCGCTGTCTTATGGCGAACTGGCAGGTGAACGCATGAAACTCG
GCTTGATGCTGCATGATCCGGAGGAGGAGCAAGACTGCTTCTCCGACAACACCTACAATTCGCACCTCTATGATGCGATC
GGTATCCGCGCCGCCTACCTGGCCAGTTACACGCGCCTCGACGGCACCGTCGTTTCGGGCCCTTCGGTGCACGACATGGT
CAAGGCGGCCGATCCGGCGATCGACAAGGAACTGTCCGACAAGCTAGACGTCACCGTCGCCAAGATGGAGGCGATCAAGG
CGCGGGCCGAGGCCGGCGAGGCCTATGACCAGCAGATCGCCGAGGGCAACACGGCAGGCAACGCCACCGTGCAGGCGGCG
ATCGACGCCTTGATCGACCAGACCAAGTCGATCGAACGTGCGGTCGGCTCGCTGAAACTCAACGCCATCGCCTTCGAAGG
CTCCGACAGCCTCGACGCACCCGACAAGGTGTTCAAGTAA

Upstream 100 bases:

>100_bases
CATTTTGGTGTCTTTCTTCCCCGAACCGCGCAATGGCGCGGCAACTCTTGGCGCTTTTGGCAACGACGTGGCCCGGCGCC
GGTCGCGGCGCGCGCCGCTT

Downstream 100 bases:

>100_bases
GCGCCGAAACCTGGAGCCTGCCTGGCCGGAAGCTGATAATCGGCTCCGGAATGGGCTCCGGGACCTGAACAAGCCACACG
GCGCGGGAGGCGCCGTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Iron-Regulated Protein A; Insulin-Cleaving Metalloproteinase Outer Membrane Protein; Peptidase; Imelysin; Lipoprotein; Peptidase Imelysin Family; Insulin-Cleaving Metalloproteinase Outer Membrane; Iron-Regulated Lipoprotein; Imelysin Family; Exported Protein

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MEFPKNWRPIMTARYGGRLAAIGATALLTAAVFVLPAKAETDAKAVIRTYSDIALAKYEDSLTTAQALDKAVDALLAKPS
AETLNVARDAWKAARVPYQQTEVYRFGNKIVDDWEGEVNSWPLDEGLIDYVAKSYGTESDTNSLYTANVIANKEIEINGK
KVDASKLSPEFLSGTLQQAGGVEANVATGYHAIEFLLWGQDLHGTGPGAGERPYTDYDLRNCTGGNCDRRAEYLKSATTL
LVSDLQKMVNDWKEDGAARKNLVDGEPNTAISVIFTGMGSLSYGELAGERMKLGLMLHDPEEEQDCFSDNTYNSHLYDAI
GIRAAYLASYTRLDGTVVSGPSVHDMVKAADPAIDKELSDKLDVTVAKMEAIKARAEAGEAYDQQIAEGNTAGNATVQAA
IDALIDQTKSIERAVGSLKLNAIAFEGSDSLDAPDKVFK

Sequences:

>Translated_439_residues
MEFPKNWRPIMTARYGGRLAAIGATALLTAAVFVLPAKAETDAKAVIRTYSDIALAKYEDSLTTAQALDKAVDALLAKPS
AETLNVARDAWKAARVPYQQTEVYRFGNKIVDDWEGEVNSWPLDEGLIDYVAKSYGTESDTNSLYTANVIANKEIEINGK
KVDASKLSPEFLSGTLQQAGGVEANVATGYHAIEFLLWGQDLHGTGPGAGERPYTDYDLRNCTGGNCDRRAEYLKSATTL
LVSDLQKMVNDWKEDGAARKNLVDGEPNTAISVIFTGMGSLSYGELAGERMKLGLMLHDPEEEQDCFSDNTYNSHLYDAI
GIRAAYLASYTRLDGTVVSGPSVHDMVKAADPAIDKELSDKLDVTVAKMEAIKARAEAGEAYDQQIAEGNTAGNATVQAA
IDALIDQTKSIERAVGSLKLNAIAFEGSDSLDAPDKVFK
>Mature_439_residues
MEFPKNWRPIMTARYGGRLAAIGATALLTAAVFVLPAKAETDAKAVIRTYSDIALAKYEDSLTTAQALDKAVDALLAKPS
AETLNVARDAWKAARVPYQQTEVYRFGNKIVDDWEGEVNSWPLDEGLIDYVAKSYGTESDTNSLYTANVIANKEIEINGK
KVDASKLSPEFLSGTLQQAGGVEANVATGYHAIEFLLWGQDLHGTGPGAGERPYTDYDLRNCTGGNCDRRAEYLKSATTL
LVSDLQKMVNDWKEDGAARKNLVDGEPNTAISVIFTGMGSLSYGELAGERMKLGLMLHDPEEEQDCFSDNTYNSHLYDAI
GIRAAYLASYTRLDGTVVSGPSVHDMVKAADPAIDKELSDKLDVTVAKMEAIKARAEAGEAYDQQIAEGNTAGNATVQAA
IDALIDQTKSIERAVGSLKLNAIAFEGSDSLDAPDKVFK

Specific function: Unknown

COG id: COG3487

COG function: function code P; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47389; Mature: 47389

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFPKNWRPIMTARYGGRLAAIGATALLTAAVFVLPAKAETDAKAVIRTYSDIALAKYED
CCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
SLTTAQALDKAVDALLAKPSAETLNVARDAWKAARVPYQQTEVYRFGNKIVDDWEGEVNS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCCCCC
WPLDEGLIDYVAKSYGTESDTNSLYTANVIANKEIEINGKKVDASKLSPEFLSGTLQQAG
CCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEECCCEECHHHCCHHHHHHHHHHCC
GVEANVATGYHAIEFLLWGQDLHGTGPGAGERPYTDYDLRNCTGGNCDRRAEYLKSATTL
CCCEEHHCCHHHEEHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LVSDLQKMVNDWKEDGAARKNLVDGEPNTAISVIFTGMGSLSYGELAGERMKLGLMLHDP
HHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHCCCCEEEEEEEECC
EEEQDCFSDNTYNSHLYDAIGIRAAYLASYTRLDGTVVSGPSVHDMVKAADPAIDKELSD
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCHHHHHHHH
KLDVTVAKMEAIKARAEAGEAYDQQIAEGNTAGNATVQAAIDALIDQTKSIERAVGSLKL
HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEE
NAIAFEGSDSLDAPDKVFK
EEEEECCCCCCCCCHHHCC
>Mature Secondary Structure
MEFPKNWRPIMTARYGGRLAAIGATALLTAAVFVLPAKAETDAKAVIRTYSDIALAKYED
CCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
SLTTAQALDKAVDALLAKPSAETLNVARDAWKAARVPYQQTEVYRFGNKIVDDWEGEVNS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCCCCC
WPLDEGLIDYVAKSYGTESDTNSLYTANVIANKEIEINGKKVDASKLSPEFLSGTLQQAG
CCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEECCCEECHHHCCHHHHHHHHHHCC
GVEANVATGYHAIEFLLWGQDLHGTGPGAGERPYTDYDLRNCTGGNCDRRAEYLKSATTL
CCCEEHHCCHHHEEHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LVSDLQKMVNDWKEDGAARKNLVDGEPNTAISVIFTGMGSLSYGELAGERMKLGLMLHDP
HHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEEECCCCCCHHHHCCCCEEEEEEEECC
EEEQDCFSDNTYNSHLYDAIGIRAAYLASYTRLDGTVVSGPSVHDMVKAADPAIDKELSD
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCHHHHHHHH
KLDVTVAKMEAIKARAEAGEAYDQQIAEGNTAGNATVQAAIDALIDQTKSIERAVGSLKL
HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEE
NAIAFEGSDSLDAPDKVFK
EEEEECCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA